RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 BBOX1O75936 387 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 CASTP20810 708 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 HOXA10P31260 410 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 GYG1P46976 350 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 SLC15A2Q16348 729 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 TSGA10IPQ3SY00 556 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 TMC4Q7Z404 712 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 FBXO33Q7Z6M2 555 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 OSBP2Q969R2 916 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 CRAMP1Q96RY5 1269 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 BRIP1Q9BX63 1249 aa12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-206ENST00000567379 DOCK2Q92608 1830 aa12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 NRXN2Q9P2S2 1712 aa12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 XDHP47989 1333 aa12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 KLRG2A4D1S0 409 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 HSPD1P10809 573 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 PDE6AP16499 860 aa12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 HIBADHP31937 336 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 FAM84BQ96KN1 310 aaPredicted RBP12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 CTNNA3Q9UI47 895 aa12.97□□□□□ -0.33
VPS9D1-206ENST00000567379 QSER1Q2KHR3 1735 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 ZNF532Q9HCE3 1301 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 MYO5AQ9Y4I1 1855 aaKnown RBP12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 FRAT2O75474 233 aaPredicted RBP12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 MMP10P09238 476 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 HSPA6P17066 643 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 PDE6BP35913 854 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 VPS53Q5VIR6 699 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 BLOC1S2Q6QNY1 142 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 RUFY3Q7L099 469 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 TMX3Q96JJ7 454 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 TTC14Q96N46 770 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 ANO8Q9HCE9 1232 aaPredicted RBP12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 PDRG1Q9NUG6 133 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 LRP2BPQ9P2M1 347 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 WWC3Q9ULE0 1092 aa12.96□□□□□ -0.33
VPS9D1-206ENST00000567379 RPAP1Q9BWH6 1393 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 PDS5AQ29RF7 1337 aaKnown RBP12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 ZBTB22O15209 634 aa12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 GPAA1O43292 621 aa12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 ATP2B4P23634 1241 aa12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 ADCK5Q3MIX3 580 aa12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 MAGEB6Q8N7X4 407 aa12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 PUS7LQ9H0K6 701 aaKnown RBP12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 CWC22Q9HCG8 908 aaKnown RBP12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 IQSEC3Q9UPP2 1182 aaPredicted RBP12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 ANKRD31Q8N7Z5 1873 aa12.95□□□□□ -0.34
VPS9D1-206ENST00000567379 MYH13Q9UKX3 1938 aa12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 TCRBV5S4A2TA0A5A2 114 aa12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 NPR1P16066 1061 aa12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 GPR162Q16538 588 aa12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 C15orf52Q6ZUT6 534 aaKnown RBP12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 NOL8Q76FK4 1167 aaKnown RBP12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 AIDAQ96BJ3 306 aa12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 ZSCAN31Q96LW9 406 aaPredicted RBP12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 LIMCH1Q9UPQ0 1083 aa12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
VPS9D1-206ENST00000567379 WTIPA6NIX2 430 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 CYP21A2P08686 494 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 HMGB1P09429 215 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 ALDH1B1P30837 517 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 DDIT3P35638 169 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 AK2P54819 239 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 GPSM2P81274 684 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 CUL4AQ13619 759 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 ANKRD1Q15327 319 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 ZNF804AQ7Z570 1209 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 SP8Q8IXZ3 490 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 NEK1Q96PY6 1258 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 ALDH8A1Q9H2A2 487 aaPredicted RBP12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 RAI14Q9P0K7 980 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 GGA1Q9UJY5 639 aa12.93□□□□□ -0.34
VPS9D1-206ENST00000567379 PPEF1O14829 653 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 UFL1O94874 794 aa12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 CPA1P15085 419 aa12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 GNAT2P19087 354 aa12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 KLRK1P26718 216 aa12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 TMED8Q6PL24 325 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 INTS4Q96HW7 963 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 PDGFDQ9GZP0 370 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 MTFR1LQ9H019 292 aa12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 PODXL2Q9NZ53 605 aa12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 NSFL1CQ9UNZ2 370 aaKnown RBP12.92□□□□□ -0.34
VPS9D1-206ENST00000567379 IRS2Q9Y4H2 1338 aa12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 IGSF3O75054 1194 aa12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 MBD4O95243 580 aa12.91□□□□□ -0.34
VPS9D1-206ENST00000567379 APPP05067 770 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms