RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 TM4SF5O14894 197 aa6.78□□□□□ -1.32
CDH1-211ENST00000567320 GRIK1P39086 918 aa6.78□□□□□ -1.32
CDH1-211ENST00000567320 PREPP48147 710 aa6.78□□□□□ -1.32
CDH1-211ENST00000567320 FKBP4Q02790 459 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDH1-211ENST00000567320 ZNF211Q13398 564 aaPredicted RBP6.78□□□□□ -1.32
CDH1-211ENST00000567320 HGSNATQ68CP4 663 aa6.78□□□□□ -1.32
CDH1-211ENST00000567320 CLEC10AQ8IUN9 316 aa6.78□□□□□ -1.32
CDH1-211ENST00000567320 FAM20CQ8IXL6 584 aa6.78□□□□□ -1.32
CDH1-211ENST00000567320 C12orf50Q8NA57 414 aaPredicted RBP6.78□□□□□ -1.32
CDH1-211ENST00000567320 NXPE3Q969Y0 559 aa6.78□□□□□ -1.32
CDH1-211ENST00000567320 SOX13Q9UN79 622 aa6.78□□□□□ -1.32
CDH1-211ENST00000567320 SOX1O00570 391 aaPredicted RBP6.77□□□□□ -1.33
CDH1-211ENST00000567320 CD97P48960 835 aa6.77□□□□□ -1.33
CDH1-211ENST00000567320 SF3B2Q13435 895 aaKnown RBP6.77□□□□□ -1.33
CDH1-211ENST00000567320 RNF43Q68DV7 783 aa6.77□□□□□ -1.33
CDH1-211ENST00000567320 DBNDD2Q9BQY9 259 aa6.77□□□□□ -1.33
CDH1-211ENST00000567320 AMOTL2Q9Y2J4 779 aa6.77□□□□□ -1.33
CDH1-211ENST00000567320 GSTM4Q03013 218 aa6.76□□□□□ -1.33
CDH1-211ENST00000567320 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.76□□□□□ -1.33
CDH1-211ENST00000567320 FAM83CQ9BQN1 747 aa6.76□□□□□ -1.33
CDH1-211ENST00000567320 LATS2Q9NRM7 1088 aa6.76□□□□□ -1.33
CDH1-211ENST00000567320 CCDC87Q9NVE4 849 aa6.76□□□□□ -1.33
CDH1-211ENST00000567320 MED26O95402 600 aa6.75□□□□□ -1.33
CDH1-211ENST00000567320 POLR3DP05423 398 aaPredicted RBP6.75□□□□□ -1.33
CDH1-211ENST00000567320 VN1R5Q7Z5H4 357 aa6.75□□□□□ -1.33
CDH1-211ENST00000567320 C14orf37Q86TY3 774 aa6.75□□□□□ -1.33
CDH1-211ENST00000567320 ZDHHC13Q8IUH4 622 aa6.75□□□□□ -1.33
CDH1-211ENST00000567320 CYP4F12Q9HCS2 524 aa6.75□□□□□ -1.33
CDH1-211ENST00000567320 WDR64B1ANS9 1081 aa6.74□□□□□ -1.33
CDH1-211ENST00000567320 FZD6O60353 706 aa6.74□□□□□ -1.33
CDH1-211ENST00000567320 NPR3P17342 541 aa6.74□□□□□ -1.33
CDH1-211ENST00000567320 USP11P51784 963 aa6.74□□□□□ -1.33
CDH1-211ENST00000567320 INTS5Q6P9B9 1019 aaKnown RBP6.74□□□□□ -1.33
CDH1-211ENST00000567320 FBXL6Q8N531 539 aa6.74□□□□□ -1.33
CDH1-211ENST00000567320 GIMAP7Q8NHV1 300 aa6.74□□□□□ -1.33
CDH1-211ENST00000567320 SHKBP1Q8TBC3 707 aa6.74□□□□□ -1.33
CDH1-211ENST00000567320 MFSD14AQ96MC6 490 aa6.74□□□□□ -1.33
CDH1-211ENST00000567320 HIF3AQ9Y2N7 669 aa6.74□□□□□ -1.33
CDH1-211ENST00000567320 METTL12A8MUP2 240 aa6.73□□□□□ -1.33
CDH1-211ENST00000567320 MAP4P27816 1152 aaKnown RBP6.73□□□□□ -1.33
CDH1-211ENST00000567320 IRAK1P51617 712 aa6.73□□□□□ -1.33
CDH1-211ENST00000567320 SGO2Q562F6 1265 aa6.73□□□□□ -1.33
CDH1-211ENST00000567320 PHLDB3Q6NSJ2 640 aa6.73□□□□□ -1.33
CDH1-211ENST00000567320 C1orf115Q9H7X2 142 aa6.73□□□□□ -1.33
CDH1-211ENST00000567320 ZFYVE28Q9HCC9 887 aa6.73□□□□□ -1.33
CDH1-211ENST00000567320 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
CDH1-211ENST00000567320 BRPF3Q9ULD4 1205 aa6.73□□□□□ -1.33
CDH1-211ENST00000567320 LOC100289279A0A1B0GTE1 492 aa6.72□□□□□ -1.33
CDH1-211ENST00000567320 MEGF11A6BM72 1044 aa6.72□□□□□ -1.33
CDH1-211ENST00000567320 ESRRAP11474 423 aaPredicted RBP6.72□□□□□ -1.33
CDH1-211ENST00000567320 DRD2P14416 443 aa6.72□□□□□ -1.33
CDH1-211ENST00000567320 GP2P55259 537 aaKnown RBP6.72□□□□□ -1.33
CDH1-211ENST00000567320 NFKBIBQ15653 356 aa6.72□□□□□ -1.33
CDH1-211ENST00000567320 MCTP1Q6DN14 999 aa6.72□□□□□ -1.33
CDH1-211ENST00000567320 B4GALNT3Q6L9W6 998 aa6.72□□□□□ -1.33
CDH1-211ENST00000567320 GLYCTKQ8IVS8 523 aa6.72□□□□□ -1.33
CDH1-211ENST00000567320 GJD3Q8N144 294 aa6.72□□□□□ -1.33
CDH1-211ENST00000567320 BHLHE41Q9C0J9 482 aaPredicted RBP6.72□□□□□ -1.33
CDH1-211ENST00000567320 H3BRB1 525 aa6.71□□□□□ -1.34
CDH1-211ENST00000567320 PEAR1Q5VY43 1037 aaPredicted RBP6.71□□□□□ -1.34
CDH1-211ENST00000567320 TMPRSS13Q9BYE2 586 aa6.71□□□□□ -1.34
CDH1-211ENST00000567320 TUT1Q9H6E5 874 aaKnown RBP6.71□□□□□ -1.34
CDH1-211ENST00000567320 FAM95CA0A1B0GW59 222 aa6.7□□□□□ -1.34
CDH1-211ENST00000567320 PRR19A6NJB7 356 aa6.7□□□□□ -1.34
CDH1-211ENST00000567320 KIAA1324LA8MWY0 1029 aaPredicted RBP6.7□□□□□ -1.34
CDH1-211ENST00000567320 EXOSC6Q5RKV6 272 aaKnown RBP6.7□□□□□ -1.34
CDH1-211ENST00000567320 PAOXQ6QHF9 649 aa6.7□□□□□ -1.34
CDH1-211ENST00000567320 SMG8Q8ND04 991 aaKnown RBP6.7□□□□□ -1.34
CDH1-211ENST00000567320 OSBPL1AQ9BXW6 950 aa6.7□□□□□ -1.34
CDH1-211ENST00000567320 KRTAP9-2Q9BYQ4 174 aa6.7□□□□□ -1.34
CDH1-211ENST00000567320 SOX17Q9H6I2 414 aaPredicted RBP6.7□□□□□ -1.34
CDH1-211ENST00000567320 LIN7BQ9HAP6 207 aa6.7□□□□□ -1.34
CDH1-211ENST00000567320 LEMD3Q9Y2U8 911 aa6.7□□□□□ -1.34
CDH1-211ENST00000567320 A0A096LPE4 126 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 A0A1W2PPZ6 126 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.69□□□□□ -1.34
CDH1-211ENST00000567320 PAX4O43316 350 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 EIF4EBP3O60516 100 aaPredicted RBP6.69□□□□□ -1.34
CDH1-211ENST00000567320 DLGAP3O95886 979 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 WNT11O96014 354 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 NEFLP07196 543 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 PCDH1Q08174 1060 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 TMC1Q8TDI8 760 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 FBLIM1Q8WUP2 373 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 YIPF2Q9BWQ6 316 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 RAD18Q9NS91 495 aa6.69□□□□□ -1.34
CDH1-211ENST00000567320 OAS3Q9Y6K5 1087 aaKnown RBP6.69□□□□□ -1.34
CDH1-211ENST00000567320 A0A1W2PP55 124 aa6.68□□□□□ -1.34
CDH1-211ENST00000567320 NDUFB5O43674 189 aa6.68□□□□□ -1.34
CDH1-211ENST00000567320 ICMTO60725 284 aa6.68□□□□□ -1.34
CDH1-211ENST00000567320 SPRED3Q2MJR0 410 aa6.68□□□□□ -1.34
CDH1-211ENST00000567320 DDX54Q8TDD1 881 aaKnown RBP6.68□□□□□ -1.34
CDH1-211ENST00000567320 ARID3AQ99856 593 aa6.68□□□□□ -1.34
CDH1-211ENST00000567320 CLEC4MQ9H2X3 399 aaPredicted RBP6.68□□□□□ -1.34
CDH1-211ENST00000567320 SUGCTQ9HAC7 445 aa6.68□□□□□ -1.34
CDH1-211ENST00000567320 PIM2Q9P1W9 311 aa6.68□□□□□ -1.34
CDH1-211ENST00000567320 KRTAP9-6A0A140TA67 174 aa6.67□□□□□ -1.34
CDH1-211ENST00000567320 TIAF1O95411 115 aa6.67□□□□□ -1.34
CDH1-211ENST00000567320 CYP11A1P05108 521 aa6.67□□□□□ -1.34
CDH1-211ENST00000567320 MAOBP27338 520 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms