RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 SPOCK3Q9BQ16 436 aa14.51□□□□□ -0.09
NIFKP4-201ENST00000567275 CD68P34810 354 aaPredicted RBP14.5□□□□□ -0.09
NIFKP4-201ENST00000567275 GATA4P43694 442 aa14.5□□□□□ -0.09
NIFKP4-201ENST00000567275 GRIA4P48058 902 aa14.5□□□□□ -0.09
NIFKP4-201ENST00000567275 ARL4DP49703 201 aa14.5□□□□□ -0.09
NIFKP4-201ENST00000567275 ATP2B2Q01814 1243 aa14.5□□□□□ -0.09
NIFKP4-201ENST00000567275 TRAK1Q9UPV9 953 aa14.5□□□□□ -0.09
NIFKP4-201ENST00000567275 CCDC27Q2M243 656 aa14.49□□□□□ -0.09
NIFKP4-201ENST00000567275 VN1R5Q7Z5H4 357 aa14.49□□□□□ -0.09
NIFKP4-201ENST00000567275 ANKRD33BA6NCL7 494 aa14.48□□□□□ -0.09
NIFKP4-201ENST00000567275 SPRED3Q2MJR0 410 aa14.48□□□□□ -0.09
NIFKP4-201ENST00000567275 PI16Q6UXB8 463 aa14.48□□□□□ -0.09
NIFKP4-201ENST00000567275 MRPL18Q9H0U6 180 aaKnown RBP14.48□□□□□ -0.09
NIFKP4-201ENST00000567275 OSGEPQ9NPF4 335 aa14.48□□□□□ -0.09
NIFKP4-201ENST00000567275 P4HBP07237 508 aaKnown RBP14.47□□□□□ -0.09
NIFKP4-201ENST00000567275 ADGRE1Q14246 886 aa14.47□□□□□ -0.09
NIFKP4-201ENST00000567275 MBTPS1Q14703 1052 aa14.47□□□□□ -0.09
NIFKP4-201ENST00000567275 PPP4R2Q9NY27 417 aa14.47□□□□□ -0.09
NIFKP4-201ENST00000567275 GRM2Q14416 872 aa14.46□□□□□ -0.09
NIFKP4-201ENST00000567275 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.46□□□□□ -0.09
NIFKP4-201ENST00000567275 ALG1LQ6GMV1 187 aa14.46□□□□□ -0.09
NIFKP4-201ENST00000567275 FBF1Q8TES7 1133 aa14.46□□□□□ -0.09
NIFKP4-201ENST00000567275 KLHDC7BQ96G42 594 aa14.46□□□□□ -0.09
NIFKP4-201ENST00000567275 PROCP04070 461 aa14.45□□□□□ -0.1
NIFKP4-201ENST00000567275 C19orf57Q0VDD7 668 aa14.45□□□□□ -0.1
NIFKP4-201ENST00000567275 SUZ12Q15022 739 aaKnown RBP14.45□□□□□ -0.1
NIFKP4-201ENST00000567275 FOXD4L6Q3SYB3 417 aaPredicted RBP14.45□□□□□ -0.1
NIFKP4-201ENST00000567275 FOXD4L3Q6VB84 417 aaPredicted RBP14.45□□□□□ -0.1
NIFKP4-201ENST00000567275 CLEC4MQ9H2X3 399 aaPredicted RBP14.45□□□□□ -0.1
NIFKP4-201ENST00000567275 SOX1O00570 391 aaPredicted RBP14.44□□□□□ -0.1
NIFKP4-201ENST00000567275 PRPF40BQ6NWY9 871 aaKnown RBP14.44□□□□□ -0.1
NIFKP4-201ENST00000567275 TXNRD3Q86VQ6 643 aa14.44□□□□□ -0.1
NIFKP4-201ENST00000567275 WWC3Q9ULE0 1092 aa14.44□□□□□ -0.1
NIFKP4-201ENST00000567275 ESRRAP11474 423 aaPredicted RBP14.43□□□□□ -0.1
NIFKP4-201ENST00000567275 PCDH1Q08174 1060 aa14.43□□□□□ -0.1
NIFKP4-201ENST00000567275 SETDB2Q96T68 719 aa14.43□□□□□ -0.1
NIFKP4-201ENST00000567275 BCO2Q9BYV7 579 aa14.43□□□□□ -0.1
NIFKP4-201ENST00000567275 ABCB6Q9NP58 842 aa14.43□□□□□ -0.1
NIFKP4-201ENST00000567275 TMEM238LA0A1B0GVL6 79 aa14.42□□□□□ -0.1
NIFKP4-201ENST00000567275 LDHBP07195 334 aaKnown RBP14.42□□□□□ -0.1
NIFKP4-201ENST00000567275 HGSNATQ68CP4 663 aa14.42□□□□□ -0.1
NIFKP4-201ENST00000567275 KCNK4Q9NYG8 393 aa14.42□□□□□ -0.1
NIFKP4-201ENST00000567275 DDX3YO15523 660 aaKnown RBP14.41□□□□□ -0.1
NIFKP4-201ENST00000567275 ITPKAP23677 461 aa14.41□□□□□ -0.1
NIFKP4-201ENST00000567275 NLRP12P59046 1061 aa14.41□□□□□ -0.1
NIFKP4-201ENST00000567275 DUOXA2Q1HG44 320 aa14.41□□□□□ -0.1
NIFKP4-201ENST00000567275 WFDC12Q8WWY7 111 aa14.41□□□□□ -0.1
NIFKP4-201ENST00000567275 AKTIPQ9H8T0 292 aa14.41□□□□□ -0.1
NIFKP4-201ENST00000567275 IREB2P48200 963 aaKnown RBP14.4□□□□□ -0.1
NIFKP4-201ENST00000567275 COL19A1Q14993 1142 aa14.4□□□□□ -0.1
NIFKP4-201ENST00000567275 EAPPQ56P03 285 aaPredicted RBP14.4□□□□□ -0.1
NIFKP4-201ENST00000567275 DNAJC14Q6Y2X3 702 aaPredicted RBP14.4□□□□□ -0.1
NIFKP4-201ENST00000567275 DTHD1Q6ZMT9 781 aa14.4□□□□□ -0.1
NIFKP4-201ENST00000567275 ACAD11Q709F0 780 aa14.4□□□□□ -0.1
NIFKP4-201ENST00000567275 GLIS3Q8NEA6 775 aa14.4□□□□□ -0.1
NIFKP4-201ENST00000567275 ZNF576Q9H609 170 aa14.4□□□□□ -0.1
NIFKP4-201ENST00000567275 SOX17Q9H6I2 414 aaPredicted RBP14.4□□□□□ -0.1
NIFKP4-201ENST00000567275 TM4SF5O14894 197 aa14.39□□□□□ -0.11
NIFKP4-201ENST00000567275 FCGRTP55899 365 aa14.39□□□□□ -0.11
NIFKP4-201ENST00000567275 PTPN12Q05209 780 aaKnown RBP14.39□□□□□ -0.11
NIFKP4-201ENST00000567275 NXPE4Q6UWF7 544 aa14.39□□□□□ -0.11
NIFKP4-201ENST00000567275 TMEM130Q8N3G9 435 aa14.39□□□□□ -0.11
NIFKP4-201ENST00000567275 FOXD4L4Q8WXT5 416 aaPredicted RBP14.39□□□□□ -0.11
NIFKP4-201ENST00000567275 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
NIFKP4-201ENST00000567275 F8W735 103 aaPredicted RBP14.38□□□□□ -0.11
NIFKP4-201ENST00000567275 ADAM11O75078 769 aa14.38□□□□□ -0.11
NIFKP4-201ENST00000567275 FGD1P98174 961 aa14.38□□□□□ -0.11
NIFKP4-201ENST00000567275 GSTM4Q03013 218 aa14.38□□□□□ -0.11
NIFKP4-201ENST00000567275 SPG7Q9UQ90 795 aa14.38□□□□□ -0.11
NIFKP4-201ENST00000567275 EIF4EBP3O60516 100 aaPredicted RBP14.37□□□□□ -0.11
NIFKP4-201ENST00000567275 ALX3O95076 343 aa14.37□□□□□ -0.11
NIFKP4-201ENST00000567275 WISP1O95388 367 aa14.37□□□□□ -0.11
NIFKP4-201ENST00000567275 NOS3P29474 1203 aa14.37□□□□□ -0.11
NIFKP4-201ENST00000567275 ZNF423Q2M1K9 1284 aa14.37□□□□□ -0.11
NIFKP4-201ENST00000567275 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.37□□□□□ -0.11
NIFKP4-201ENST00000567275 UBASH3BQ8TF42 649 aa14.37□□□□□ -0.11
NIFKP4-201ENST00000567275 BICRAQ9NZM4 1560 aa14.37□□□□□ -0.11
NIFKP4-201ENST00000567275 DOC2BQ14184 412 aa14.36□□□□□ -0.11
NIFKP4-201ENST00000567275 AGGF1Q8N302 714 aaeCLIP14.36□□□□□ -0.11
NIFKP4-201ENST00000567275 DDX54Q8TDD1 881 aaKnown RBP14.36□□□□□ -0.11
NIFKP4-201ENST00000567275 ZFYVE1Q9HBF4 777 aa14.36□□□□□ -0.11
NIFKP4-201ENST00000567275 SHROOM4Q9ULL8 1493 aa14.36□□□□□ -0.11
NIFKP4-201ENST00000567275 XRCC5P13010 732 aaKnown RBP14.35□□□□□ -0.11
NIFKP4-201ENST00000567275 TMCO4Q5TGY1 634 aa14.35□□□□□ -0.11
NIFKP4-201ENST00000567275 NPAS4Q8IUM7 802 aa14.35□□□□□ -0.11
NIFKP4-201ENST00000567275 USP26Q9BXU7 913 aa14.35□□□□□ -0.11
NIFKP4-201ENST00000567275 DCAF1Q9Y4B6 1507 aa14.35□□□□□ -0.11
NIFKP4-201ENST00000567275 GIPC1O14908 333 aa14.34□□□□□ -0.11
NIFKP4-201ENST00000567275 ERCC3P19447 782 aa14.34□□□□□ -0.11
NIFKP4-201ENST00000567275 SRCIN1Q9C0H9 1055 aa14.34□□□□□ -0.11
NIFKP4-201ENST00000567275 PRPF40AO75400 957 aaKnown RBP14.33□□□□□ -0.12
NIFKP4-201ENST00000567275 GLB1P16278 677 aa14.33□□□□□ -0.12
NIFKP4-201ENST00000567275 RPS26P11Q5JNZ5 115 aaPredicted RBP14.33□□□□□ -0.12
NIFKP4-201ENST00000567275 AKAP2Q9Y2D5 859 aa14.33□□□□□ -0.12
NIFKP4-201ENST00000567275 B3GALT4O96024 378 aa14.32□□□□□ -0.12
NIFKP4-201ENST00000567275 KIAA1211Q6ZU35 1233 aa14.32□□□□□ -0.12
NIFKP4-201ENST00000567275 TPSG1Q9NRR2 321 aa14.32□□□□□ -0.12
NIFKP4-201ENST00000567275 RUSC1Q9BVN2 902 aa14.31□□□□□ -0.12
NIFKP4-201ENST00000567275 OSBPL7Q9BZF2 842 aa14.31□□□□□ -0.12
NIFKP4-201ENST00000567275 GSTT1P30711 240 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms