RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 KLHL40Q2TBA0 621 aa27.6■■■□□ 2.01
LINC00543-201ENST00000567234 WASHC4Q2M389 1173 aa27.6■■■□□ 2.01
LINC00543-201ENST00000567234 ERFEQ4G0M1 354 aa27.6■■■□□ 2.01
LINC00543-201ENST00000567234 ZSCAN30Q86W11 494 aa27.6■■■□□ 2.01
LINC00543-201ENST00000567234 CCDC83Q8IWF9 413 aa27.6■■■□□ 2.01
LINC00543-201ENST00000567234 ARHGEF1Q92888 912 aaKnown RBP27.6■■■□□ 2.01
LINC00543-201ENST00000567234 LMBRD1Q9NUN5 540 aa27.6■■■□□ 2.01
LINC00543-201ENST00000567234 ADD2P35612 726 aa27.59■■■□□ 2.01
LINC00543-201ENST00000567234 TBC1D9BQ66K14 1250 aa27.59■■■□□ 2.01
LINC00543-201ENST00000567234 PI16Q6UXB8 463 aa27.59■■■□□ 2.01
LINC00543-201ENST00000567234 HELBQ8NG08 1087 aaPredicted RBP27.59■■■□□ 2.01
LINC00543-201ENST00000567234 MYO5AQ9Y4I1 1855 aaKnown RBP27.59■■■□□ 2.01
LINC00543-201ENST00000567234 DOCK2Q92608 1830 aa27.59■■■□□ 2.01
LINC00543-201ENST00000567234 ZPR1O75312 459 aa27.58■■■□□ 2.01
LINC00543-201ENST00000567234 UBE3CQ15386 1083 aa27.58■■■□□ 2.01
LINC00543-201ENST00000567234 A0A1B0GUL6 1792 aa27.58■■■□□ 2.01
LINC00543-201ENST00000567234 RGPD3A6NKT7 1758 aaPredicted RBP27.58■■■□□ 2.01
LINC00543-201ENST00000567234 RGPD4Q7Z3J3 1758 aa27.58■■■□□ 2.01
LINC00543-201ENST00000567234 OFD1O75665 1012 aa27.57■■■□□ 2
LINC00543-201ENST00000567234 COL9A3Q14050 684 aaPredicted RBP27.57■■■□□ 2
LINC00543-201ENST00000567234 ST3GAL1Q11201 340 aa27.56■■■□□ 2
LINC00543-201ENST00000567234 DHX32Q7L7V1 743 aaKnown RBP27.56■■■□□ 2
LINC00543-201ENST00000567234 SETDB2Q96T68 719 aa27.56■■■□□ 2
LINC00543-201ENST00000567234 STX6O43752 255 aa27.55■■■□□ 2
LINC00543-201ENST00000567234 CHRNDQ07001 517 aa27.55■■■□□ 2
LINC00543-201ENST00000567234 STOX1Q6ZVD7 989 aa27.55■■■□□ 2
LINC00543-201ENST00000567234 MTERF4Q7Z6M4 381 aaKnown RBP27.55■■■□□ 2
LINC00543-201ENST00000567234 ANKRD18AQ8IVF6 992 aa27.55■■■□□ 2
LINC00543-201ENST00000567234 DDX49Q9Y6V7 483 aaKnown RBP27.55■■■□□ 2
LINC00543-201ENST00000567234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.55■■■□□ 2
LINC00543-201ENST00000567234 SYT1P21579 422 aa27.55■■■□□ 2
LINC00543-201ENST00000567234 GJB2P29033 226 aa27.55■■■□□ 2
LINC00543-201ENST00000567234 EN1Q05925 392 aaPredicted RBP27.55■■■□□ 2
LINC00543-201ENST00000567234 ZNF827Q17R98 1081 aa27.55■■■□□ 2
LINC00543-201ENST00000567234 SPATA5Q8NB90 893 aa27.55■■■□□ 2
LINC00543-201ENST00000567234 PIH1D3Q9NQM4 214 aaKnown RBP27.55■■■□□ 2
LINC00543-201ENST00000567234 BSDC1Q9NW68 430 aaPredicted RBP27.55■■■□□ 2
LINC00543-201ENST00000567234 ZSCAN22P10073 491 aaPredicted RBP27.54■■■□□ 2
LINC00543-201ENST00000567234 GTF2E1P29083 439 aaPredicted RBP27.54■■■□□ 2
LINC00543-201ENST00000567234 SLC9C2Q5TAH2 1124 aa27.54■■■□□ 2
LINC00543-201ENST00000567234 PUS7LQ9H0K6 701 aaKnown RBP27.54■■■□□ 2
LINC00543-201ENST00000567234 EZH2Q15910 746 aaKnown RBP27.53■■■□□ 2
LINC00543-201ENST00000567234 TRAPPC3LQ5T215 181 aa27.53■■■□□ 2
LINC00543-201ENST00000567234 TCEANC2Q96MN5 208 aa27.53■■■□□ 2
LINC00543-201ENST00000567234 E7EWF7 191 aa27.53■■■□□ 2
LINC00543-201ENST00000567234 FOXP2O15409 715 aa27.53■■■□□ 2
LINC00543-201ENST00000567234 GPAA1O43292 621 aa27.53■■■□□ 2
LINC00543-201ENST00000567234 EXOSC10Q01780 885 aaKnown RBP27.53■■■□□ 2
LINC00543-201ENST00000567234 Q6ZUG5 572 aa27.53■■■□□ 2
LINC00543-201ENST00000567234 AGXT2Q9BYV1 514 aa27.53■■■□□ 2
LINC00543-201ENST00000567234 IMMTQ16891 758 aaKnown RBP27.52■■■□□ 2
LINC00543-201ENST00000567234 FOXD4L5Q5VV16 416 aaPredicted RBP27.52■■■□□ 2
LINC00543-201ENST00000567234 BICDL1Q6ZP65 573 aa27.52■■■□□ 2
LINC00543-201ENST00000567234 NECAB1Q8N987 351 aa27.52■■■□□ 2
LINC00543-201ENST00000567234 FOXD4L4Q8WXT5 416 aaPredicted RBP27.52■■■□□ 2
LINC00543-201ENST00000567234 RFC4P35249 363 aa27.51■■□□□ 1.99
LINC00543-201ENST00000567234 RASGRF1Q13972 1273 aa27.51■■□□□ 1.99
LINC00543-201ENST00000567234 TPTE2Q6XPS3 522 aa27.51■■□□□ 1.99
LINC00543-201ENST00000567234 FBXL16Q8N461 479 aa27.51■■□□□ 1.99
LINC00543-201ENST00000567234 ATP6V1DQ9Y5K8 247 aa27.51■■□□□ 1.99
LINC00543-201ENST00000567234 TCHHQ07283 1943 aa27.51■■□□□ 1.99
LINC00543-201ENST00000567234 PRPF40AO75400 957 aaKnown RBP27.51■■□□□ 1.99
LINC00543-201ENST00000567234 PDCP20941 246 aa27.51■■□□□ 1.99
LINC00543-201ENST00000567234 UBE4AQ14139 1066 aa27.51■■□□□ 1.99
LINC00543-201ENST00000567234 NBPF5PQ86XG9 351 aaPredicted RBP27.51■■□□□ 1.99
LINC00543-201ENST00000567234 COL4A1P02462 1669 aa27.5■■□□□ 1.99
LINC00543-201ENST00000567234 IDH1O75874 414 aaKnown RBP27.5■■□□□ 1.99
LINC00543-201ENST00000567234 FGAP02671 866 aa27.5■■□□□ 1.99
LINC00543-201ENST00000567234 PDE6AP16499 860 aa27.5■■□□□ 1.99
LINC00543-201ENST00000567234 C3orf67Q6ZVT6 689 aa27.5■■□□□ 1.99
LINC00543-201ENST00000567234 NLRP3Q96P20 1036 aa27.5■■□□□ 1.99
LINC00543-201ENST00000567234 CAMKK2Q96RR4 588 aa27.5■■□□□ 1.99
LINC00543-201ENST00000567234 TAF1P21675 1872 aa27.49■■□□□ 1.99
LINC00543-201ENST00000567234 TCRBV5S4A2TA0A5A2 114 aa27.49■■□□□ 1.99
LINC00543-201ENST00000567234 ADRA2BP18089 450 aa27.49■■□□□ 1.99
LINC00543-201ENST00000567234 MAP3K12Q12852 859 aa27.49■■□□□ 1.99
LINC00543-201ENST00000567234 GTF3C6Q969F1 213 aa27.49■■□□□ 1.99
LINC00543-201ENST00000567234 AKT1S1Q96B36 256 aa27.49■■□□□ 1.99
LINC00543-201ENST00000567234 MCM5P33992 734 aa27.48■■□□□ 1.99
LINC00543-201ENST00000567234 DEFB132Q7Z7B7 95 aa27.48■■□□□ 1.99
LINC00543-201ENST00000567234 ZNF532Q9HCE3 1301 aa27.48■■□□□ 1.99
LINC00543-201ENST00000567234 F13A1P00488 732 aa27.48■■□□□ 1.99
LINC00543-201ENST00000567234 SNAP23O00161 211 aa27.47■■□□□ 1.99
LINC00543-201ENST00000567234 NASPP49321 788 aaPredicted RBP27.47■■□□□ 1.99
LINC00543-201ENST00000567234 ZNF445P59923 1031 aa27.47■■□□□ 1.99
LINC00543-201ENST00000567234 ZNF804BA4D1E1 1349 aa27.47■■□□□ 1.99
LINC00543-201ENST00000567234 MBD3O95983 291 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 BCAMP50895 628 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 TTLL5Q6EMB2 1281 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 GAS2L3Q86XJ1 694 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 CHMP4CQ96CF2 233 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 MTMR6Q9Y217 621 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 FGD1P98174 961 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 BRF1Q92994 677 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 TFCP2L1Q9NZI6 479 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 MINPP1Q9UNW1 487 aa27.46■■□□□ 1.99
LINC00543-201ENST00000567234 MSNP26038 577 aaKnown RBP27.45■■□□□ 1.98
LINC00543-201ENST00000567234 TMEM87AQ8NBN3 555 aa27.45■■□□□ 1.98
LINC00543-201ENST00000567234 LLPHQ9BRT6 129 aaKnown RBP27.45■■□□□ 1.98
LINC00543-201ENST00000567234 GNL3LQ9NVN8 582 aaKnown RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms