RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 METTL22Q9BUU2 404 aaPredicted RBP21.71■■□□□ 1.07
CDH3-205ENST00000566808 ZSWIM8A7E2V4 1837 aa21.71■■□□□ 1.07
CDH3-205ENST00000566808 DDX58O95786 925 aaKnown RBP21.7■■□□□ 1.06
CDH3-205ENST00000566808 KLRK1P26718 216 aa21.7■■□□□ 1.06
CDH3-205ENST00000566808 CHRDL2Q6WN34 429 aa21.7■■□□□ 1.06
CDH3-205ENST00000566808 ARAP2Q8WZ64 1704 aa21.69■■□□□ 1.06
CDH3-205ENST00000566808 ANKRD2Q9GZV1 360 aa21.69■■□□□ 1.06
CDH3-205ENST00000566808 MBIPQ9NS73 344 aa21.69■■□□□ 1.06
CDH3-205ENST00000566808 SPDYE2BA6NHP3 402 aa21.68■■□□□ 1.06
CDH3-205ENST00000566808 SPDYE6P0CI01 402 aa21.68■■□□□ 1.06
CDH3-205ENST00000566808 IGHMBP2P38935 993 aaKnown RBP21.68■■□□□ 1.06
CDH3-205ENST00000566808 NBPF12Q5TAG4 269 aaPredicted RBP21.68■■□□□ 1.06
CDH3-205ENST00000566808 CCDC146Q8IYE0 955 aa21.68■■□□□ 1.06
CDH3-205ENST00000566808 OPTNQ96CV9 577 aa21.68■■□□□ 1.06
CDH3-205ENST00000566808 CLRN2A0PK11 232 aa21.67■■□□□ 1.06
CDH3-205ENST00000566808 DLL1O00548 723 aa21.67■■□□□ 1.06
CDH3-205ENST00000566808 TAF1CQ15572 869 aaPredicted RBP21.67■■□□□ 1.06
CDH3-205ENST00000566808 CERS5Q8N5B7 392 aa21.67■■□□□ 1.06
CDH3-205ENST00000566808 VEZTQ9HBM0 779 aa21.67■■□□□ 1.06
CDH3-205ENST00000566808 ZFYVE28Q9HCC9 887 aa21.67■■□□□ 1.06
CDH3-205ENST00000566808 LAMA3Q16787 3333 aa21.67■■□□□ 1.06
CDH3-205ENST00000566808 USP2O75604 605 aaPredicted RBP21.66■■□□□ 1.06
CDH3-205ENST00000566808 MS4A4AQ96JQ5 239 aa21.66■■□□□ 1.06
CDH3-205ENST00000566808 ELP3Q9H9T3 547 aa21.66■■□□□ 1.06
CDH3-205ENST00000566808 CD209Q9NNX6 404 aa21.66■■□□□ 1.06
CDH3-205ENST00000566808 RBM27Q9P2N5 1060 aaKnown RBP21.66■■□□□ 1.06
CDH3-205ENST00000566808 KCNJ4P48050 445 aa21.65■■□□□ 1.06
CDH3-205ENST00000566808 CFAP100Q494V2 611 aa21.65■■□□□ 1.06
CDH3-205ENST00000566808 RUNDC1Q96C34 613 aa21.65■■□□□ 1.06
CDH3-205ENST00000566808 PCDHAC2Q9Y5I4 1007 aa21.65■■□□□ 1.06
CDH3-205ENST00000566808 MYCP01106 439 aaPredicted RBP21.64■■□□□ 1.05
CDH3-205ENST00000566808 RASA3Q14644 834 aa21.64■■□□□ 1.05
CDH3-205ENST00000566808 BRI3BPQ8WY22 251 aa21.64■■□□□ 1.05
CDH3-205ENST00000566808 MAP3K2Q9Y2U5 619 aa21.64■■□□□ 1.05
CDH3-205ENST00000566808 CCL15-CCL14A0A0B4J2E2 113 aa21.63■■□□□ 1.05
CDH3-205ENST00000566808 IGKV5-2P06315 115 aa21.63■■□□□ 1.05
CDH3-205ENST00000566808 GTF2A2P52657 109 aa21.63■■□□□ 1.05
CDH3-205ENST00000566808 FKBP1AP62942 108 aaKnown RBP21.63■■□□□ 1.05
CDH3-205ENST00000566808 TNFAIP1Q13829 316 aa21.63■■□□□ 1.05
CDH3-205ENST00000566808 CCL15Q16663 113 aa21.63■■□□□ 1.05
CDH3-205ENST00000566808 SLC17A8Q8NDX2 589 aa21.63■■□□□ 1.05
CDH3-205ENST00000566808 SH3TC2Q8TF17 1288 aa21.63■■□□□ 1.05
CDH3-205ENST00000566808 MPHOSPH8Q99549 860 aa21.63■■□□□ 1.05
CDH3-205ENST00000566808 WDHD1O75717 1129 aaPredicted RBP21.62■■□□□ 1.05
CDH3-205ENST00000566808 ZNF853P0CG23 659 aa21.62■■□□□ 1.05
CDH3-205ENST00000566808 PRMT6Q96LA8 375 aaPredicted RBP21.62■■□□□ 1.05
CDH3-205ENST00000566808 CHMP4AQ9BY43 222 aa21.62■■□□□ 1.05
CDH3-205ENST00000566808 AOX1Q06278 1338 aa21.61■■□□□ 1.05
CDH3-205ENST00000566808 IRS2Q9Y4H2 1338 aa21.61■■□□□ 1.05
CDH3-205ENST00000566808 F8W031 263 aaPredicted RBP21.61■■□□□ 1.05
CDH3-205ENST00000566808 GNRH1P01148 92 aa21.61■■□□□ 1.05
CDH3-205ENST00000566808 ITGA6P23229 1130 aa21.61■■□□□ 1.05
CDH3-205ENST00000566808 NEXNQ0ZGT2 675 aa21.61■■□□□ 1.05
CDH3-205ENST00000566808 KIF22Q14807 665 aa21.61■■□□□ 1.05
CDH3-205ENST00000566808 SHISA4Q96DD7 197 aa21.61■■□□□ 1.05
CDH3-205ENST00000566808 PRMT2P55345 433 aa21.6■■□□□ 1.05
CDH3-205ENST00000566808 LACTBP83111 547 aaPredicted RBP21.6■■□□□ 1.05
CDH3-205ENST00000566808 RALBP1Q15311 655 aa21.6■■□□□ 1.05
CDH3-205ENST00000566808 KSR2Q6VAB6 950 aa21.6■■□□□ 1.05
CDH3-205ENST00000566808 C15orf52Q6ZUT6 534 aaKnown RBP21.6■■□□□ 1.05
CDH3-205ENST00000566808 FAM43AQ8N2R8 423 aa21.6■■□□□ 1.05
CDH3-205ENST00000566808 DPF3Q92784 378 aa21.6■■□□□ 1.05
CDH3-205ENST00000566808 ZCCHC17Q9NP64 241 aaKnown RBP21.6■■□□□ 1.05
CDH3-205ENST00000566808 IFT57Q9NWB7 429 aa21.6■■□□□ 1.05
CDH3-205ENST00000566808 CHRNDQ07001 517 aa21.59■■□□□ 1.05
CDH3-205ENST00000566808 VGLL4Q14135 290 aa21.59■■□□□ 1.05
CDH3-205ENST00000566808 CCDC30Q5VVM6 783 aa21.59■■□□□ 1.05
CDH3-205ENST00000566808 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.59■■□□□ 1.05
CDH3-205ENST00000566808 UBE3BQ7Z3V4 1068 aa21.59■■□□□ 1.05
CDH3-205ENST00000566808 ZNF804AQ7Z570 1209 aa21.59■■□□□ 1.05
CDH3-205ENST00000566808 CNKSR2Q8WXI2 1034 aa21.59■■□□□ 1.05
CDH3-205ENST00000566808 PRO3102Q9H379 93 aa21.59■■□□□ 1.05
CDH3-205ENST00000566808 PI4KAP2A4QPH2 592 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 NEURL1BA8MQ27 555 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 ELL2O00472 640 aaPredicted RBP21.58■■□□□ 1.05
CDH3-205ENST00000566808 TLR2O60603 784 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 IL1R1P14778 569 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 RBM5P52756 815 aaKnown RBP eCLIP21.58■■□□□ 1.05
CDH3-205ENST00000566808 SPDYE2Q495Y8 402 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 PI4KAP1Q8N8J0 262 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 NKX2-3Q8TAU0 364 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 PLA2G12BQ9BX93 195 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 ARHGAP39Q9C0H5 1083 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 CSADQ9Y600 493 aa21.58■■□□□ 1.05
CDH3-205ENST00000566808 WDR43Q15061 677 aaKnown RBP eCLIP21.57■■□□□ 1.04
CDH3-205ENST00000566808 CWF19L2Q2TBE0 894 aaKnown RBP21.57■■□□□ 1.04
CDH3-205ENST00000566808 HTATIP2Q9BUP3 242 aa21.57■■□□□ 1.04
CDH3-205ENST00000566808 GNAI1P63096 354 aa21.56■■□□□ 1.04
CDH3-205ENST00000566808 CALD1Q05682 793 aaKnown RBP21.56■■□□□ 1.04
CDH3-205ENST00000566808 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.56■■□□□ 1.04
CDH3-205ENST00000566808 TEPSINQ96N21 525 aa21.56■■□□□ 1.04
CDH3-205ENST00000566808 A0A1W2PPC1 479 aa21.55■■□□□ 1.04
CDH3-205ENST00000566808 H7C1W4 665 aa21.55■■□□□ 1.04
CDH3-205ENST00000566808 UBE2Q1Q7Z7E8 422 aa21.55■■□□□ 1.04
CDH3-205ENST00000566808 SPDYE5A6NIY4 337 aa21.54■■□□□ 1.04
CDH3-205ENST00000566808 MAP3K9P80192 1104 aa21.54■■□□□ 1.04
CDH3-205ENST00000566808 CDAN1Q8IWY9 1227 aa21.54■■□□□ 1.04
CDH3-205ENST00000566808 C8orf58Q8NAV2 365 aa21.54■■□□□ 1.04
CDH3-205ENST00000566808 ZNF70Q9UC06 446 aaPredicted RBP21.54■■□□□ 1.04
CDH3-205ENST00000566808 NR2E3Q9Y5X4 410 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms