RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 FAM26DQ5JW98 314 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 SLC9A9Q8IVB4 645 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 FBF1Q8TES7 1133 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 TNFRSF25Q93038 417 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 LENG1Q96BZ8 264 aaPredicted RBP4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 QTRT2Q9H974 415 aaKnown RBP4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 PCMTD2Q9NV79 361 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 CABP1Q9NZU7 370 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 GABBR1Q9UBS5 961 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 USP21Q9UK80 565 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 MRVI1Q9Y6F6 885 aa4.56□□□□□ -1.68
HERPUD1-211ENST00000566550 A6NHS1 94 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 EIF1AYO14602 144 aaKnown RBP4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 PPP1R12AO14974 1030 aaPredicted RBP4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 U2SURPO15042 1029 aaKnown RBP4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 PDGFAP04085 211 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 GJA8P48165 433 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 SCNN1DP51172 638 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 IRAK1P51617 712 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 CHMP4BP1P59074 171 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 PI16Q6UXB8 463 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 SLC51AQ86UW1 340 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 GJD3Q8N144 294 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 UBE2Q2Q8WVN8 375 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 SLKQ9H2G2 1235 aaPredicted RBP4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 ZNF408Q9H9D4 720 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 SPC25Q9HBM1 224 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 COPRSQ9NQ92 184 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 LRFN2Q9ULH4 789 aa4.55□□□□□ -1.68
HERPUD1-211ENST00000566550 F6X3S4 739 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 EFSO43281 561 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 ALBP02768 609 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 NID1P14543 1247 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 ADH7P40394 386 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 USP5P45974 858 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 NASPP49321 788 aaPredicted RBP4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 PTPN12Q05209 780 aaKnown RBP4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 SERINC3Q13530 473 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 ANKS3Q6ZW76 656 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 TTC16Q8NEE8 873 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 MORC4Q8TE76 937 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 RNPC3Q96LT9 517 aaKnown RBP4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 BRINP2Q9C0B6 783 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 STRN4Q9NRL3 753 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 CHMP3Q9Y3E7 222 aa4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 GPC6Q9Y625 555 aaPredicted RBP4.54□□□□□ -1.68
HERPUD1-211ENST00000566550 A0A0A0MRY4 1105 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 CCDC194A0A1B0GVG4 234 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 ENPP3O14638 875 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 CDC45O75419 566 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 PCSK2P16519 638 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 ZAP70P43403 619 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 EPHA4P54764 986 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 DGKZQ13574 1117 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 ETFBKMTQ8IXQ9 262 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 CCDC146Q8IYE0 955 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 RPUSD2Q8IZ73 545 aaKnown RBP4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 GPR152Q8TDT2 470 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 HNRNPLLQ8WVV9 542 aaKnown RBP4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 JDP2Q8WYK2 163 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 FRMD6Q96NE9 622 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 MDFIQ99750 246 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 C2orf49Q9BVC5 232 aaPredicted RBP4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 IRF2BPLQ9H1B7 796 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 C12orf49Q9H741 205 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 PRDM16Q9HAZ2 1276 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 FANCLQ9NW38 375 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 DDX56Q9NY93 547 aaKnown RBP4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 SNTG2Q9NY99 539 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 FAN1Q9Y2M0 1017 aa4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 R3HCC1Q9Y3T6 440 aaKnown RBP4.53□□□□□ -1.68
HERPUD1-211ENST00000566550 A6NJY4 79 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 USP17L7P0C7H9 530 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 SELPP16109 830 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 PSMA6P60900 246 aaKnown RBP4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 IRX6P78412 446 aaPredicted RBP4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 COL9A3Q14050 684 aaPredicted RBP4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 TAF1CQ15572 869 aaPredicted RBP4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 C8orf86Q6ZUL3 223 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 TICAM2Q86XR7 235 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 FMNL3Q8IVF7 1028 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 PRPF38AQ8NAV1 312 aaKnown RBP4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 NUDT16Q96DE0 195 aaKnown RBP4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 FMNL2Q96PY5 1086 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 DEPDC7Q96QD5 511 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 SPON2Q9BUD6 331 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 KBTBD4Q9NVX7 518 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 KLK14Q9P0G3 267 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 ZNF232Q9UNY5 417 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 EFR3BQ9Y2G0 817 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 STARD13Q9Y3M8 1113 aa4.52□□□□□ -1.69
HERPUD1-211ENST00000566550 CPNE3O75131 537 aaKnown RBP4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 ETFBP38117 255 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 SPEM2Q0P670 501 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 FZD5Q13467 585 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 SH3PXD2AQ5TCZ1 1133 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 NBPF6Q5VWK0 638 aa4.51□□□□□ -1.69
HERPUD1-211ENST00000566550 USPL1Q5W0Q7 1092 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms