RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 IQSEC3Q9UPP2 1182 aaPredicted RBP15.99■□□□□ 0.15
CNEP1R1-208ENST00000566482 CEP350Q5VT06 3117 aa15.99■□□□□ 0.15
CNEP1R1-208ENST00000566482 FAM205AQ6ZU69 1335 aa15.98■□□□□ 0.15
CNEP1R1-208ENST00000566482 TRAF5O00463 557 aa15.98■□□□□ 0.15
CNEP1R1-208ENST00000566482 FKBP1AP62942 108 aaKnown RBP15.98■□□□□ 0.15
CNEP1R1-208ENST00000566482 FMR1Q06787 632 aaKnown RBP eCLIP15.98■□□□□ 0.15
CNEP1R1-208ENST00000566482 TFCP2Q12800 502 aa15.98■□□□□ 0.15
CNEP1R1-208ENST00000566482 PDE3AQ14432 1141 aa15.98■□□□□ 0.15
CNEP1R1-208ENST00000566482 OGFOD1Q8N543 542 aa15.98■□□□□ 0.15
CNEP1R1-208ENST00000566482 GLIS2Q9BZE0 524 aaPredicted RBP15.98■□□□□ 0.15
CNEP1R1-208ENST00000566482 DDX19BQ9UMR2 479 aa15.98■□□□□ 0.15
CNEP1R1-208ENST00000566482 ASTN2O75129 1339 aaPredicted RBP15.97■□□□□ 0.15
CNEP1R1-208ENST00000566482 FRAT2O75474 233 aaPredicted RBP15.97■□□□□ 0.15
CNEP1R1-208ENST00000566482 CHAF1AQ13111 956 aaPredicted RBP15.97■□□□□ 0.15
CNEP1R1-208ENST00000566482 G3BP1Q13283 466 aaKnown RBP eCLIP15.97■□□□□ 0.15
CNEP1R1-208ENST00000566482 CEP85Q6P2H3 762 aa15.97■□□□□ 0.15
CNEP1R1-208ENST00000566482 GGA3Q9NZ52 723 aa15.97■□□□□ 0.15
CNEP1R1-208ENST00000566482 MMP14P50281 582 aa15.96■□□□□ 0.15
CNEP1R1-208ENST00000566482 SCARF1Q14162 830 aa15.96■□□□□ 0.15
CNEP1R1-208ENST00000566482 CREBZFQ9NS37 354 aa15.96■□□□□ 0.15
CNEP1R1-208ENST00000566482 ZBTB40Q9NUA8 1239 aa15.96■□□□□ 0.15
CNEP1R1-208ENST00000566482 HDAC9Q9UKV0 1011 aa15.96■□□□□ 0.15
CNEP1R1-208ENST00000566482 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.96■□□□□ 0.15
CNEP1R1-208ENST00000566482 ARAP2Q8WZ64 1704 aa15.96■□□□□ 0.15
CNEP1R1-208ENST00000566482 TMEM88BA6NKF7 163 aa15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 F8W031 263 aaPredicted RBP15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 ADORA1P30542 326 aa15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 MFSD14BQ5SR56 506 aa15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 CDC37L1Q7L3B6 337 aa15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 KRT26Q7Z3Y9 468 aa15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 USP48Q86UV5 1035 aa15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 DNAJC5GQ8N7S2 189 aa15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 DCPSQ96C86 337 aaKnown RBP15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 AKAP2Q9Y2D5 859 aa15.95■□□□□ 0.14
CNEP1R1-208ENST00000566482 A0A1B0GUL7 405 aa15.94■□□□□ 0.14
CNEP1R1-208ENST00000566482 PHKA1P46020 1223 aa15.94■□□□□ 0.14
CNEP1R1-208ENST00000566482 TIMM10P62072 90 aa15.94■□□□□ 0.14
CNEP1R1-208ENST00000566482 NBPF9Q3BBW0 867 aa15.94■□□□□ 0.14
CNEP1R1-208ENST00000566482 CHMP4BQ9H444 224 aaKnown RBP15.94■□□□□ 0.14
CNEP1R1-208ENST00000566482 TRPM7Q96QT4 1865 aa15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 COL1A1P02452 1464 aaPredicted RBP15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 ADM5C9JUS6 153 aa15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 WNT10BO00744 389 aa15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 SURF6O75683 361 aaKnown RBP15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 OS9Q13438 667 aaPredicted RBP15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 ANGEL2Q5VTE6 544 aaKnown RBP15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 DLK2Q6UY11 383 aa15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 ZBED3Q96IU2 234 aaPredicted RBP15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 NOP58Q9Y2X3 529 aaKnown RBP15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 PITPNM2Q9BZ72 1349 aa15.93■□□□□ 0.14
CNEP1R1-208ENST00000566482 RRP1P56182 461 aaKnown RBP15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 DLGAP5Q15398 846 aa15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 GRIK5Q16478 980 aa15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 CST9Q5W186 159 aa15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 CCDC102BQ68D86 513 aa15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 SULF1Q8IWU6 871 aa15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 TBC1D22AQ8WUA7 517 aa15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 XAGE2Q96GT9 111 aa15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 GNL3LQ9NVN8 582 aaKnown RBP15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 PCDHAC2Q9Y5I4 1007 aa15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 MYH13Q9UKX3 1938 aa15.92■□□□□ 0.14
CNEP1R1-208ENST00000566482 POLR2AP24928 1970 aaKnown RBP15.91■□□□□ 0.14
CNEP1R1-208ENST00000566482 CELF2O95319 508 aaKnown RBP15.91■□□□□ 0.14
CNEP1R1-208ENST00000566482 CFAP100Q494V2 611 aa15.91■□□□□ 0.14
CNEP1R1-208ENST00000566482 MTMR14Q8NCE2 650 aa15.91■□□□□ 0.14
CNEP1R1-208ENST00000566482 KLRG1Q96E93 195 aa15.91■□□□□ 0.14
CNEP1R1-208ENST00000566482 NEUROD6Q96NK8 337 aa15.91■□□□□ 0.14
CNEP1R1-208ENST00000566482 ZNF408Q9H9D4 720 aa15.91■□□□□ 0.14
CNEP1R1-208ENST00000566482 TTF2Q9UNY4 1162 aaKnown RBP15.91■□□□□ 0.14
CNEP1R1-208ENST00000566482 SIRT2Q8IXJ6 389 aa15.9■□□□□ 0.14
CNEP1R1-208ENST00000566482 RPAP2Q8IXW5 612 aaPredicted RBP15.9■□□□□ 0.14
CNEP1R1-208ENST00000566482 WDR66Q8TBY9 1149 aa15.9■□□□□ 0.14
CNEP1R1-208ENST00000566482 GPR108Q9NPR9 543 aa15.9■□□□□ 0.14
CNEP1R1-208ENST00000566482 SCAF8Q9UPN6 1271 aaKnown RBP15.9■□□□□ 0.14
CNEP1R1-208ENST00000566482 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 SEMA3EO15041 775 aa15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 RBM5P52756 815 aaKnown RBP eCLIP15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 TNNI3KQ59H18 835 aa15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 MKRN1Q9UHC7 482 aaKnown RBP15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 SERPINA10Q9UK55 444 aa15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 DENND2AQ9ULE3 1009 aa15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 ABT1Q9ULW3 272 aaKnown RBP15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 EXOC6BQ9Y2D4 811 aa15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 FPGT-TNNI3KV9GXZ4 949 aa15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 AOX1Q06278 1338 aa15.89■□□□□ 0.13
CNEP1R1-208ENST00000566482 CNTNAP1P78357 1384 aa15.88■□□□□ 0.13
CNEP1R1-208ENST00000566482 ZBTB22O15209 634 aa15.88■□□□□ 0.13
CNEP1R1-208ENST00000566482 HMMRO75330 724 aa15.88■□□□□ 0.13
CNEP1R1-208ENST00000566482 RASGRF1Q13972 1273 aa15.88■□□□□ 0.13
CNEP1R1-208ENST00000566482 GORABQ5T7V8 394 aa15.88■□□□□ 0.13
CNEP1R1-208ENST00000566482 CDCA5Q96FF9 252 aa15.88■□□□□ 0.13
CNEP1R1-208ENST00000566482 PRMT6Q96LA8 375 aaPredicted RBP15.88■□□□□ 0.13
CNEP1R1-208ENST00000566482 SUGT1Q9Y2Z0 365 aa15.88■□□□□ 0.13
CNEP1R1-208ENST00000566482 CRKP46108 304 aa15.87■□□□□ 0.13
CNEP1R1-208ENST00000566482 ERC1Q8IUD2 1116 aa15.87■□□□□ 0.13
CNEP1R1-208ENST00000566482 APOBEC3FQ8IUX4 373 aaKnown RBP15.87■□□□□ 0.13
CNEP1R1-208ENST00000566482 TLL2Q9Y6L7 1015 aa15.87■□□□□ 0.13
CNEP1R1-208ENST00000566482 MAST3O60307 1309 aa15.87■□□□□ 0.13
CNEP1R1-208ENST00000566482 ECM29Q5VYK3 1845 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms