RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 GRAPQ13588 217 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 SCARF1Q14162 830 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 NBR1Q14596 966 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 VPS53Q5VIR6 699 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 CREB3L3Q68CJ9 461 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 PRR5LQ6MZQ0 368 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 C15orf52Q6ZUT6 534 aaKnown RBP10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 TMC4Q7Z404 712 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 ZNF589Q86UQ0 364 aaPredicted RBP10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 RASEFQ8IZ41 740 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 NLGN1Q8N2Q7 840 aa10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 GRAPLQ8TC17 118 aaPredicted RBP10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 CELF1Q92879 486 aaKnown RBP10.62□□□□□ -0.71
LSM3P5-201ENST00000566307 MAST3O60307 1309 aa10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 ZMYM6O95789 1325 aa10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 POLRMTO00411 1230 aaKnown RBP10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 CYP2E1P05181 493 aaPredicted RBP10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 ADD2P35612 726 aa10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 NUBP1P53384 320 aa10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 PRPF40BQ6NWY9 871 aaKnown RBP10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 SMIM5Q71RC9 77 aa10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 SPATA5Q8NB90 893 aa10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 GNL3LQ9NVN8 582 aaKnown RBP10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 LRRC37AA6NMS7 1700 aa10.61□□□□□ -0.71
LSM3P5-201ENST00000566307 FKBP4Q02790 459 aaKnown RBP eCLIP10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 RASGRF1Q13972 1273 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 ZNF827Q17R98 1081 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 DCAF8Q5TAQ9 597 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 POTEAQ6S8J7 498 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 RUFY3Q7L099 469 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 FBXO33Q7Z6M2 555 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 CRAMP1Q96RY5 1269 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 LEMD3Q9Y2U8 911 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 CYP46A1Q9Y6A2 500 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 NDUFB9Q9Y6M9 179 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 DUOX1Q9NRD9 1551 aa10.6□□□□□ -0.71
LSM3P5-201ENST00000566307 IRS2Q9Y4H2 1338 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 TCRBV5S4A2TA0A5A2 114 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 BBOX1O75936 387 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 HMGB1P09429 215 aaKnown RBP10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 HSPD1P10809 573 aaKnown RBP10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 KCNJ4P48050 445 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 DDR1Q08345 913 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 MAP3K12Q12852 859 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 ANKRD1Q15327 319 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 CAVIN4Q5BKX8 364 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 CLEC17AQ6ZS10 378 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 HELBQ8NG08 1087 aaPredicted RBP10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 OSBP2Q969R2 916 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 TMX3Q96JJ7 454 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 PIH1D3Q9NQM4 214 aaKnown RBP10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 SH2B1Q9NRF2 756 aaPredicted RBP10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 TFCP2L1Q9NZI6 479 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 CTNNA3Q9UI47 895 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 DENND2AQ9ULE3 1009 aa10.59□□□□□ -0.71
LSM3P5-201ENST00000566307 TAF1P21675 1872 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 HSP90AA1P07900 732 aaKnown RBP10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 PDE6AP16499 860 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 NUCB2P80303 420 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 RAB3GAP1Q15042 981 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 ALX1Q15699 326 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 COL23A1Q86Y22 540 aaPredicted RBP10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 FBXL16Q8N461 479 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 RBM17Q96I25 401 aaKnown RBP10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 FAM84BQ96KN1 310 aaPredicted RBP10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 CAMKK2Q96RR4 588 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 SEC62Q99442 399 aaKnown RBP10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 BRIP1Q9BX63 1249 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 SLKQ9H2G2 1235 aaPredicted RBP10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 PODXL2Q9NZ53 605 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 LIMCH1Q9UPQ0 1083 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 XDHP47989 1333 aa10.58□□□□□ -0.72
LSM3P5-201ENST00000566307 M0R2C6 588 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 NPHP1O15259 732 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 CYP21A2P08686 494 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 PDIA4P13667 645 aaKnown RBP10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 BCAMP50895 628 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 ADCK5Q3MIX3 580 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 SLC9C2Q5TAH2 1124 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 BLOC1S2Q6QNY1 142 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 PI16Q6UXB8 463 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 JAKMIP1Q96N16 626 aaKnown RBP10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 UPF3BQ9BZI7 483 aaKnown RBP10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 PDRG1Q9NUG6 133 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 ANKRD31Q8N7Z5 1873 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 PNPLA7Q6ZV29 1317 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 WDR19Q8NEZ3 1342 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 SALL1Q9NSC2 1324 aa10.57□□□□□ -0.72
LSM3P5-201ENST00000566307 LTBP1Q14766 1721 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 FOXP2O15409 715 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 GPAA1O43292 621 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 GNAT2P19087 354 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 RPS6KB1P23443 525 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 AK2P54819 239 aa10.56□□□□□ -0.72
LSM3P5-201ENST00000566307 WASHC4Q2M389 1173 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms