RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 C20orf194Q5TEA3 1177 aa22.42■■□□□ 1.18
TRADD-205ENST00000566247 SSH3Q8TE77 659 aa22.42■■□□□ 1.18
TRADD-205ENST00000566247 PASKQ96RG2 1323 aa22.41■■□□□ 1.18
TRADD-205ENST00000566247 TFCP2Q12800 502 aa22.41■■□□□ 1.18
TRADD-205ENST00000566247 CHAF1AQ13111 956 aaPredicted RBP22.41■■□□□ 1.18
TRADD-205ENST00000566247 CEP85Q6P2H3 762 aa22.41■■□□□ 1.18
TRADD-205ENST00000566247 AKAP2Q9Y2D5 859 aa22.41■■□□□ 1.18
TRADD-205ENST00000566247 FAM205AQ6ZU69 1335 aa22.4■■□□□ 1.18
TRADD-205ENST00000566247 SURF6O75683 361 aaKnown RBP22.4■■□□□ 1.18
TRADD-205ENST00000566247 MMP14P50281 582 aa22.4■■□□□ 1.18
TRADD-205ENST00000566247 FKBP1AP62942 108 aaKnown RBP22.4■■□□□ 1.18
TRADD-205ENST00000566247 CERS5Q8N5B7 392 aa22.4■■□□□ 1.18
TRADD-205ENST00000566247 DCPSQ96C86 337 aaKnown RBP22.4■■□□□ 1.18
TRADD-205ENST00000566247 PGAP2Q9UHJ9 254 aa22.4■■□□□ 1.18
TRADD-205ENST00000566247 F8W031 263 aaPredicted RBP22.39■■□□□ 1.17
TRADD-205ENST00000566247 HTRA3P83110 453 aa22.39■■□□□ 1.17
TRADD-205ENST00000566247 MFSD14BQ5SR56 506 aa22.39■■□□□ 1.17
TRADD-205ENST00000566247 ZNF646O15015 1829 aaPredicted RBP22.38■■□□□ 1.17
TRADD-205ENST00000566247 SCARF1Q14162 830 aa22.38■■□□□ 1.17
TRADD-205ENST00000566247 CDC37L1Q7L3B6 337 aa22.38■■□□□ 1.17
TRADD-205ENST00000566247 GLIS2Q9BZE0 524 aaPredicted RBP22.38■■□□□ 1.17
TRADD-205ENST00000566247 ZBTB40Q9NUA8 1239 aa22.38■■□□□ 1.17
TRADD-205ENST00000566247 GNL3LQ9NVN8 582 aaKnown RBP22.38■■□□□ 1.17
TRADD-205ENST00000566247 GGA3Q9NZ52 723 aa22.38■■□□□ 1.17
TRADD-205ENST00000566247 TRAF5O00463 557 aa22.37■■□□□ 1.17
TRADD-205ENST00000566247 RRP1P56182 461 aaKnown RBP22.37■■□□□ 1.17
TRADD-205ENST00000566247 A0A1B0GUL7 405 aa22.36■■□□□ 1.17
TRADD-205ENST00000566247 TMEM88BA6NKF7 163 aa22.36■■□□□ 1.17
TRADD-205ENST00000566247 ADORA1P30542 326 aa22.36■■□□□ 1.17
TRADD-205ENST00000566247 TIMM10P62072 90 aa22.36■■□□□ 1.17
TRADD-205ENST00000566247 KRT26Q7Z3Y9 468 aa22.36■■□□□ 1.17
TRADD-205ENST00000566247 TBC1D22AQ8WUA7 517 aa22.36■■□□□ 1.17
TRADD-205ENST00000566247 NEUROD6Q96NK8 337 aa22.36■■□□□ 1.17
TRADD-205ENST00000566247 CREBZFQ9NS37 354 aa22.36■■□□□ 1.17
TRADD-205ENST00000566247 ANGEL2Q5VTE6 544 aaKnown RBP22.35■■□□□ 1.17
TRADD-205ENST00000566247 USP48Q86UV5 1035 aa22.35■■□□□ 1.17
TRADD-205ENST00000566247 SULF1Q8IWU6 871 aa22.35■■□□□ 1.17
TRADD-205ENST00000566247 ASTN2O75129 1339 aaPredicted RBP22.34■■□□□ 1.17
TRADD-205ENST00000566247 HMMRO75330 724 aa22.34■■□□□ 1.17
TRADD-205ENST00000566247 PHKA1P46020 1223 aa22.34■■□□□ 1.17
TRADD-205ENST00000566247 FMR1Q06787 632 aaKnown RBP eCLIP22.34■■□□□ 1.17
TRADD-205ENST00000566247 DLGAP5Q15398 846 aa22.34■■□□□ 1.17
TRADD-205ENST00000566247 NBPF9Q3BBW0 867 aa22.34■■□□□ 1.17
TRADD-205ENST00000566247 GORABQ5T7V8 394 aa22.34■■□□□ 1.17
TRADD-205ENST00000566247 RPAP2Q8IXW5 612 aaPredicted RBP22.34■■□□□ 1.17
TRADD-205ENST00000566247 TTF2Q9UNY4 1162 aaKnown RBP22.34■■□□□ 1.17
TRADD-205ENST00000566247 WNT10BO00744 389 aa22.33■■□□□ 1.17
TRADD-205ENST00000566247 RBM5P52756 815 aaKnown RBP eCLIP22.33■■□□□ 1.17
TRADD-205ENST00000566247 CCDC102BQ68D86 513 aa22.33■■□□□ 1.17
TRADD-205ENST00000566247 XAGE2Q96GT9 111 aa22.33■■□□□ 1.17
TRADD-205ENST00000566247 ZNF408Q9H9D4 720 aa22.33■■□□□ 1.17
TRADD-205ENST00000566247 NOP58Q9Y2X3 529 aaKnown RBP22.33■■□□□ 1.17
TRADD-205ENST00000566247 ADM5C9JUS6 153 aa22.32■■□□□ 1.16
TRADD-205ENST00000566247 CFAP100Q494V2 611 aa22.32■■□□□ 1.16
TRADD-205ENST00000566247 WDR66Q8TBY9 1149 aa22.32■■□□□ 1.16
TRADD-205ENST00000566247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.32■■□□□ 1.16
TRADD-205ENST00000566247 ARAP2Q8WZ64 1704 aa22.31■■□□□ 1.16
TRADD-205ENST00000566247 SEMA3EO15041 775 aa22.31■■□□□ 1.16
TRADD-205ENST00000566247 CELF2O95319 508 aaKnown RBP22.31■■□□□ 1.16
TRADD-205ENST00000566247 ERC1Q8IUD2 1116 aa22.31■■□□□ 1.16
TRADD-205ENST00000566247 DENND2AQ9ULE3 1009 aa22.31■■□□□ 1.16
TRADD-205ENST00000566247 ABT1Q9ULW3 272 aaKnown RBP22.31■■□□□ 1.16
TRADD-205ENST00000566247 EXOC6BQ9Y2D4 811 aa22.31■■□□□ 1.16
TRADD-205ENST00000566247 PITPNM2Q9BZ72 1349 aa22.31■■□□□ 1.16
TRADD-205ENST00000566247 HSP90AB4PQ58FF6 505 aa22.3■■□□□ 1.16
TRADD-205ENST00000566247 TNNI3KQ59H18 835 aa22.3■■□□□ 1.16
TRADD-205ENST00000566247 GPR108Q9NPR9 543 aa22.3■■□□□ 1.16
TRADD-205ENST00000566247 FPGT-TNNI3KV9GXZ4 949 aa22.3■■□□□ 1.16
TRADD-205ENST00000566247 MYO1BO43795 1136 aa22.29■■□□□ 1.16
TRADD-205ENST00000566247 MTMR14Q8NCE2 650 aa22.29■■□□□ 1.16
TRADD-205ENST00000566247 MAST3O60307 1309 aa22.29■■□□□ 1.16
TRADD-205ENST00000566247 COL1A1P02452 1464 aaPredicted RBP22.28■■□□□ 1.16
TRADD-205ENST00000566247 GRIK5Q16478 980 aa22.28■■□□□ 1.16
TRADD-205ENST00000566247 DLK2Q6UY11 383 aa22.28■■□□□ 1.16
TRADD-205ENST00000566247 ZBED3Q96IU2 234 aaPredicted RBP22.28■■□□□ 1.16
TRADD-205ENST00000566247 SERPINA10Q9UK55 444 aa22.28■■□□□ 1.16
TRADD-205ENST00000566247 SUGT1Q9Y2Z0 365 aa22.28■■□□□ 1.16
TRADD-205ENST00000566247 SPDYE2BA6NHP3 402 aa22.27■■□□□ 1.16
TRADD-205ENST00000566247 SPDYE6P0CI01 402 aa22.27■■□□□ 1.16
TRADD-205ENST00000566247 CRKP46108 304 aa22.27■■□□□ 1.16
TRADD-205ENST00000566247 RASGRF1Q13972 1273 aa22.27■■□□□ 1.16
TRADD-205ENST00000566247 CST9Q5W186 159 aa22.27■■□□□ 1.16
TRADD-205ENST00000566247 APOBEC3FQ8IUX4 373 aaKnown RBP22.27■■□□□ 1.16
TRADD-205ENST00000566247 DNAJC5GQ8N7S2 189 aa22.27■■□□□ 1.16
TRADD-205ENST00000566247 KLRG1Q96E93 195 aa22.27■■□□□ 1.16
TRADD-205ENST00000566247 MKRN1Q9UHC7 482 aaKnown RBP22.27■■□□□ 1.16
TRADD-205ENST00000566247 SCAF8Q9UPN6 1271 aaKnown RBP22.27■■□□□ 1.16
TRADD-205ENST00000566247 PCDHAC2Q9Y5I4 1007 aa22.27■■□□□ 1.16
TRADD-205ENST00000566247 MYH13Q9UKX3 1938 aa22.26■■□□□ 1.15
TRADD-205ENST00000566247 APBB1O00213 710 aa22.26■■□□□ 1.15
TRADD-205ENST00000566247 SIRT2Q8IXJ6 389 aa22.26■■□□□ 1.15
TRADD-205ENST00000566247 TEKT1Q969V4 418 aa22.26■■□□□ 1.15
TRADD-205ENST00000566247 CDCA5Q96FF9 252 aa22.26■■□□□ 1.15
TRADD-205ENST00000566247 CLRN2A0PK11 232 aa22.25■■□□□ 1.15
TRADD-205ENST00000566247 CCDC158Q5M9N0 1113 aa22.25■■□□□ 1.15
TRADD-205ENST00000566247 TTC39AQ5SRH9 613 aa22.25■■□□□ 1.15
TRADD-205ENST00000566247 ZGPATQ8N5A5 531 aaKnown RBP22.25■■□□□ 1.15
TRADD-205ENST00000566247 PRMT6Q96LA8 375 aaPredicted RBP22.25■■□□□ 1.15
TRADD-205ENST00000566247 DBNDD2Q9BQY9 259 aa22.25■■□□□ 1.15
TRADD-205ENST00000566247 VEZTQ9HBM0 779 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms