RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 SEC31BQ9NQW1 1179 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 PRR12Q9ULL5 1215 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 TLR6Q9Y2C9 796 aa7.61□□□□□ -1.19
CNOT1-209ENST00000566240 CANXP27824 592 aaKnown RBP7.6□□□□□ -1.19
CNOT1-209ENST00000566240 ATP11AP98196 1134 aa7.6□□□□□ -1.19
CNOT1-209ENST00000566240 KCNMA1Q12791 1236 aa7.6□□□□□ -1.19
CNOT1-209ENST00000566240 PCSK7Q16549 785 aa7.6□□□□□ -1.19
CNOT1-209ENST00000566240 GIMAP6Q6P9H5 292 aa7.6□□□□□ -1.19
CNOT1-209ENST00000566240 FBXL19Q6PCT2 694 aa7.6□□□□□ -1.19
CNOT1-209ENST00000566240 NOP9Q86U38 636 aaKnown RBP7.6□□□□□ -1.19
CNOT1-209ENST00000566240 RHOVQ96L33 236 aa7.6□□□□□ -1.19
CNOT1-209ENST00000566240 ZNF576Q9H609 170 aa7.6□□□□□ -1.19
CNOT1-209ENST00000566240 KCNQ5Q9NR82 932 aa7.6□□□□□ -1.19
CNOT1-209ENST00000566240 DNAJB12Q9NXW2 375 aaKnown RBP7.6□□□□□ -1.19
CNOT1-209ENST00000566240 CADPSQ9ULU8 1353 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 ENC1O14682 589 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 GHRHP01286 108 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 PF4P02776 101 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 FAM160A1Q05DH4 1040 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 FAAP100Q0VG06 881 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 TTBK2Q6IQ55 1244 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 SYT9Q86SS6 491 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 GPR161Q8N6U8 529 aaKnown RBP7.59□□□□□ -1.19
CNOT1-209ENST00000566240 NT5C1AQ9BXI3 368 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 UBE2OQ9C0C9 1292 aaKnown RBP7.59□□□□□ -1.19
CNOT1-209ENST00000566240 RBSNQ9H1K0 784 aa7.59□□□□□ -1.19
CNOT1-209ENST00000566240 SUPT16HQ9Y5B9 1047 aaKnown RBP7.59□□□□□ -1.19
CNOT1-209ENST00000566240 GPR25O00155 361 aa7.58□□□□□ -1.2
CNOT1-209ENST00000566240 GREM1O60565 184 aa7.58□□□□□ -1.2
CNOT1-209ENST00000566240 SSBP05455 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
CNOT1-209ENST00000566240 GARTP22102 1010 aa7.58□□□□□ -1.2
CNOT1-209ENST00000566240 NASPP49321 788 aaPredicted RBP7.58□□□□□ -1.2
CNOT1-209ENST00000566240 LMNB2Q03252 620 aa7.58□□□□□ -1.2
CNOT1-209ENST00000566240 TBC1D8BQ0IIM8 1120 aa7.58□□□□□ -1.2
CNOT1-209ENST00000566240 CAMK2GQ13555 558 aaPredicted RBP7.58□□□□□ -1.2
CNOT1-209ENST00000566240 AGMOQ6ZNB7 445 aa7.58□□□□□ -1.2
CNOT1-209ENST00000566240 POP1Q99575 1024 aaKnown RBP7.58□□□□□ -1.2
CNOT1-209ENST00000566240 GINM1Q9NU53 330 aa7.58□□□□□ -1.2
CNOT1-209ENST00000566240 EFR3BQ9Y2G0 817 aa7.58□□□□□ -1.2
CNOT1-209ENST00000566240 CDC14CA4D256 554 aa7.57□□□□□ -1.2
CNOT1-209ENST00000566240 PAGE1O75459 146 aa7.57□□□□□ -1.2
CNOT1-209ENST00000566240 SMNDC1O75940 238 aaKnown RBP eCLIP7.57□□□□□ -1.2
CNOT1-209ENST00000566240 RPS26P62854 115 aaKnown RBP7.57□□□□□ -1.2
CNOT1-209ENST00000566240 SUZ12Q15022 739 aaKnown RBP7.57□□□□□ -1.2
CNOT1-209ENST00000566240 SNAP47Q5SQN1 464 aa7.57□□□□□ -1.2
CNOT1-209ENST00000566240 ZNF468Q5VIY5 522 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-209ENST00000566240 CEP135Q66GS9 1140 aa7.57□□□□□ -1.2
CNOT1-209ENST00000566240 VWA5B2Q8N398 1253 aa7.57□□□□□ -1.2
CNOT1-209ENST00000566240 GOLM1Q8NBJ4 401 aa7.57□□□□□ -1.2
CNOT1-209ENST00000566240 BSNDQ8WZ55 320 aa7.57□□□□□ -1.2
CNOT1-209ENST00000566240 PUS7Q96PZ0 661 aaKnown RBP7.57□□□□□ -1.2
CNOT1-209ENST00000566240 MUC3BQ9H195 1237 aa7.57□□□□□ -1.2
CNOT1-209ENST00000566240 TMEM39AQ9NV64 488 aa7.57□□□□□ -1.2
CNOT1-209ENST00000566240 GPN3Q9UHW5 284 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-209ENST00000566240 C2CD2LO14523 706 aa7.56□□□□□ -1.2
CNOT1-209ENST00000566240 SIN3BO75182 1162 aa7.56□□□□□ -1.2
CNOT1-209ENST00000566240 EIF2AK2P19525 551 aaKnown RBP7.56□□□□□ -1.2
CNOT1-209ENST00000566240 TFE3P19532 575 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-209ENST00000566240 COL9A2Q14055 689 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-209ENST00000566240 PCNX4Q63HM2 1172 aa7.56□□□□□ -1.2
CNOT1-209ENST00000566240 CLEC4MQ9H2X3 399 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-209ENST00000566240 ZSWIM4Q9H7M6 989 aa7.56□□□□□ -1.2
CNOT1-209ENST00000566240 UBP1Q9NZI7 540 aa7.56□□□□□ -1.2
CNOT1-209ENST00000566240 BMP4P12644 408 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 CPB1P15086 417 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 SOX9P48436 509 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 ZNF157P51786 506 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-209ENST00000566240 PCBP4P57723 403 aaKnown RBP7.55□□□□□ -1.2
CNOT1-209ENST00000566240 PPP2R3AQ06190 1150 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 APOBRQ0VD83 1088 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 SV2AQ7L0J3 742 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 FAM35AQ86V20 835 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 CKAP2LQ8IYA6 745 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 MICALL1Q8N3F8 863 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 OSBPL2Q9H1P3 480 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 STRIP2Q9ULQ0 834 aa7.55□□□□□ -1.2
CNOT1-209ENST00000566240 FAM196AQ6ZSG2 479 aa7.54□□□□□ -1.2
CNOT1-209ENST00000566240 TRIM42Q8IWZ5 723 aa7.54□□□□□ -1.2
CNOT1-209ENST00000566240 TNFRSF25Q93038 417 aa7.54□□□□□ -1.2
CNOT1-209ENST00000566240 NKD1Q969G9 470 aa7.54□□□□□ -1.2
CNOT1-209ENST00000566240 PLD4Q96BZ4 506 aa7.54□□□□□ -1.2
CNOT1-209ENST00000566240 COL25A1Q9BXS0 654 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-209ENST00000566240 PIF1Q9H611 641 aa7.54□□□□□ -1.2
CNOT1-209ENST00000566240 ZNF408Q9H9D4 720 aa7.54□□□□□ -1.2
CNOT1-209ENST00000566240 SAMM50Q9Y512 469 aa7.54□□□□□ -1.2
CNOT1-209ENST00000566240 HMGB1P09429 215 aaKnown RBP7.53□□□□□ -1.2
CNOT1-209ENST00000566240 LMNB1P20700 586 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 BMP6P22004 513 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 CRKP46108 304 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 PCDH1Q08174 1060 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 ZNF423Q2M1K9 1284 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 RNFT1Q5M7Z0 435 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 NBPF6Q5VWK0 638 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 TMEM151AQ8N4L1 468 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 NANOS1Q8WY41 292 aaKnown RBP7.53□□□□□ -1.2
CNOT1-209ENST00000566240 NBPF4Q96M43 638 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 AVENQ9NQS1 362 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-209ENST00000566240 SLC6A14Q9UN76 642 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 MRVI1Q9Y6F6 885 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms