RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 TTC39AQ5SRH9 613 aa18.67■□□□□ 0.58
KNOP1-203ENST00000565844 L3MBTL3Q96JM7 780 aaPredicted RBP18.67■□□□□ 0.58
KNOP1-203ENST00000565844 FAM84BQ96KN1 310 aaPredicted RBP18.67■□□□□ 0.58
KNOP1-203ENST00000565844 ECHDC1Q9NTX5 307 aa18.67■□□□□ 0.58
KNOP1-203ENST00000565844 TTC41PQ6P2S7 1318 aa18.66■□□□□ 0.58
KNOP1-203ENST00000565844 G3V3G9 751 aa18.66■□□□□ 0.58
KNOP1-203ENST00000565844 KIAA2012Q0VF49 1180 aa18.66■□□□□ 0.58
KNOP1-203ENST00000565844 DCAF8Q5TAQ9 597 aa18.66■□□□□ 0.58
KNOP1-203ENST00000565844 TSHZ3Q63HK5 1081 aa18.66■□□□□ 0.58
KNOP1-203ENST00000565844 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
KNOP1-203ENST00000565844 HACL1Q9UJ83 578 aa18.66■□□□□ 0.58
KNOP1-203ENST00000565844 CLEC11AQ9Y240 323 aa18.66■□□□□ 0.58
KNOP1-203ENST00000565844 ADAMTSL1Q8N6G6 1762 aa18.66■□□□□ 0.58
KNOP1-203ENST00000565844 EPHX2P34913 555 aa18.65■□□□□ 0.58
KNOP1-203ENST00000565844 RGS3P49796 1198 aa18.65■□□□□ 0.58
KNOP1-203ENST00000565844 PDE1AP54750 535 aa18.65■□□□□ 0.58
KNOP1-203ENST00000565844 EIF6P56537 245 aaKnown RBP18.65■□□□□ 0.58
KNOP1-203ENST00000565844 FBXO33Q7Z6M2 555 aa18.65■□□□□ 0.58
KNOP1-203ENST00000565844 VPS33BQ9H267 617 aa18.65■□□□□ 0.58
KNOP1-203ENST00000565844 GNL3LQ9NVN8 582 aaKnown RBP18.65■□□□□ 0.58
KNOP1-203ENST00000565844 AKAP11Q9UKA4 1901 aa18.65■□□□□ 0.58
KNOP1-203ENST00000565844 UQCRFS1P1P0C7P4 283 aa18.64■□□□□ 0.57
KNOP1-203ENST00000565844 DOK7Q18PE1 504 aa18.64■□□□□ 0.57
KNOP1-203ENST00000565844 NIM1KQ8IY84 436 aa18.64■□□□□ 0.57
KNOP1-203ENST00000565844 COA1Q9GZY4 146 aa18.64■□□□□ 0.57
KNOP1-203ENST00000565844 STAP2Q9UGK3 403 aa18.64■□□□□ 0.57
KNOP1-203ENST00000565844 IQSEC3Q9UPP2 1182 aaPredicted RBP18.64■□□□□ 0.57
KNOP1-203ENST00000565844 AOX1Q06278 1338 aa18.63■□□□□ 0.57
KNOP1-203ENST00000565844 ARID4AP29374 1257 aaPredicted RBP18.63■□□□□ 0.57
KNOP1-203ENST00000565844 LDHDQ86WU2 507 aa18.63■□□□□ 0.57
KNOP1-203ENST00000565844 GPC2Q8N158 579 aa18.63■□□□□ 0.57
KNOP1-203ENST00000565844 DBNDD1Q9H9R9 158 aa18.63■□□□□ 0.57
KNOP1-203ENST00000565844 AK9Q5TCS8 1911 aa18.63■□□□□ 0.57
KNOP1-203ENST00000565844 PSME4Q14997 1843 aa18.62■□□□□ 0.57
KNOP1-203ENST00000565844 ERC2O15083 957 aa18.62■□□□□ 0.57
KNOP1-203ENST00000565844 FRAT2O75474 233 aaPredicted RBP18.62■□□□□ 0.57
KNOP1-203ENST00000565844 ATP5JP18859 108 aa18.62■□□□□ 0.57
KNOP1-203ENST00000565844 ZNF512BQ96KM6 892 aaPredicted RBP18.62■□□□□ 0.57
KNOP1-203ENST00000565844 CD209Q9NNX6 404 aa18.62■□□□□ 0.57
KNOP1-203ENST00000565844 SCN9AQ15858 1988 aa18.62■□□□□ 0.57
KNOP1-203ENST00000565844 COL1A1P02452 1464 aaPredicted RBP18.61■□□□□ 0.57
KNOP1-203ENST00000565844 ECE2O60344 883 aa18.61■□□□□ 0.57
KNOP1-203ENST00000565844 GLRX3O76003 335 aaKnown RBP18.61■□□□□ 0.57
KNOP1-203ENST00000565844 IL1R1P14778 569 aa18.61■□□□□ 0.57
KNOP1-203ENST00000565844 RASGRF1Q13972 1273 aa18.61■□□□□ 0.57
KNOP1-203ENST00000565844 SCARF1Q14162 830 aa18.61■□□□□ 0.57
KNOP1-203ENST00000565844 MAP1SQ66K74 1059 aaPredicted RBP18.61■□□□□ 0.57
KNOP1-203ENST00000565844 TDRD7Q8NHU6 1098 aaKnown RBP18.61■□□□□ 0.57
KNOP1-203ENST00000565844 PI4K2BQ8TCG2 481 aa18.61■□□□□ 0.57
KNOP1-203ENST00000565844 OSBPL3Q9H4L5 887 aa18.61■□□□□ 0.57
KNOP1-203ENST00000565844 MKRN1Q9UHC7 482 aaKnown RBP18.61■□□□□ 0.57
KNOP1-203ENST00000565844 ZNF646O15015 1829 aaPredicted RBP18.61■□□□□ 0.57
KNOP1-203ENST00000565844 SEMA3EO15041 775 aa18.6■□□□□ 0.57
KNOP1-203ENST00000565844 EPS15P42566 896 aa18.6■□□□□ 0.57
KNOP1-203ENST00000565844 MCAMP43121 646 aa18.6■□□□□ 0.57
KNOP1-203ENST00000565844 BOLA2Q9H3K6 86 aa18.6■□□□□ 0.57
KNOP1-203ENST00000565844 LMOD1P29536 600 aaPredicted RBP18.59■□□□□ 0.57
KNOP1-203ENST00000565844 SCNN1DP51172 638 aa18.59■□□□□ 0.57
KNOP1-203ENST00000565844 PI16Q6UXB8 463 aa18.59■□□□□ 0.57
KNOP1-203ENST00000565844 SPATA5Q8NB90 893 aa18.59■□□□□ 0.57
KNOP1-203ENST00000565844 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.59■□□□□ 0.57
KNOP1-203ENST00000565844 SNRKQ9NRH2 765 aa18.59■□□□□ 0.57
KNOP1-203ENST00000565844 HMG20BQ9P0W2 317 aa18.59■□□□□ 0.57
KNOP1-203ENST00000565844 DENND2AQ9ULE3 1009 aa18.59■□□□□ 0.57
KNOP1-203ENST00000565844 CHAF1AQ13111 956 aaPredicted RBP18.58■□□□□ 0.57
KNOP1-203ENST00000565844 PODNQ7Z5L7 613 aa18.58■□□□□ 0.57
KNOP1-203ENST00000565844 JMYQ8N9B5 988 aa18.58■□□□□ 0.57
KNOP1-203ENST00000565844 DNAJC2Q99543 621 aaKnown RBP18.58■□□□□ 0.57
KNOP1-203ENST00000565844 NDUFB9Q9Y6M9 179 aa18.58■□□□□ 0.57
KNOP1-203ENST00000565844 MYO5AQ9Y4I1 1855 aaKnown RBP18.58■□□□□ 0.57
KNOP1-203ENST00000565844 DOCK2Q92608 1830 aa18.58■□□□□ 0.56
KNOP1-203ENST00000565844 RAD17O75943 681 aa18.57■□□□□ 0.56
KNOP1-203ENST00000565844 TTC22Q5TAA0 569 aa18.57■□□□□ 0.56
KNOP1-203ENST00000565844 FBXW7Q969H0 707 aa18.57■□□□□ 0.56
KNOP1-203ENST00000565844 HAUS7Q99871 368 aa18.57■□□□□ 0.56
KNOP1-203ENST00000565844 ZNRF3Q9ULT6 936 aa18.57■□□□□ 0.56
KNOP1-203ENST00000565844 JAG2Q9Y219 1238 aa18.57■□□□□ 0.56
KNOP1-203ENST00000565844 TRPM7Q96QT4 1865 aa18.57■□□□□ 0.56
KNOP1-203ENST00000565844 PDS5AQ29RF7 1337 aaKnown RBP18.57■□□□□ 0.56
KNOP1-203ENST00000565844 PASKQ96RG2 1323 aa18.57■□□□□ 0.56
KNOP1-203ENST00000565844 YDJCA8MPS7 323 aa18.56■□□□□ 0.56
KNOP1-203ENST00000565844 MAP4K4O95819 1239 aaPredicted RBP18.56■□□□□ 0.56
KNOP1-203ENST00000565844 ZAP70P43403 619 aa18.56■□□□□ 0.56
KNOP1-203ENST00000565844 FMR1Q06787 632 aaKnown RBP eCLIP18.56■□□□□ 0.56
KNOP1-203ENST00000565844 CXCL9Q07325 125 aa18.56■□□□□ 0.56
KNOP1-203ENST00000565844 CREBZFQ9NS37 354 aa18.56■□□□□ 0.56
KNOP1-203ENST00000565844 MYH7P12883 1935 aa18.56■□□□□ 0.56
KNOP1-203ENST00000565844 ZBTB22O15209 634 aa18.55■□□□□ 0.56
KNOP1-203ENST00000565844 ITGBL1O95965 494 aaPredicted RBP18.55■□□□□ 0.56
KNOP1-203ENST00000565844 GTF2IP78347 998 aa18.55■□□□□ 0.56
KNOP1-203ENST00000565844 PNMA8AQ86V59 439 aaPredicted RBP18.55■□□□□ 0.56
KNOP1-203ENST00000565844 CNTROBQ8N137 903 aa18.55■□□□□ 0.56
KNOP1-203ENST00000565844 KCNQ5Q9NR82 932 aa18.55■□□□□ 0.56
KNOP1-203ENST00000565844 PAG1Q9NWQ8 432 aa18.55■□□□□ 0.56
KNOP1-203ENST00000565844 MAST2Q6P0Q8 1798 aa18.55■□□□□ 0.56
KNOP1-203ENST00000565844 TRIM6-TRIM34B2RNG4 842 aa18.55■□□□□ 0.56
KNOP1-203ENST00000565844 GOLIM4O00461 696 aa18.55■□□□□ 0.56
KNOP1-203ENST00000565844 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
KNOP1-203ENST00000565844 EDC3Q96F86 508 aaKnown RBP18.55■□□□□ 0.56
KNOP1-203ENST00000565844 FAM205AQ6ZU69 1335 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms