RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 ABCA6Q8N139 1617 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 ADGRF5Q8IZF2 1346 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 RBM47A0AV96 593 aaKnown RBP6.33□□□□□ -1.4
CAPN3-214ENST00000565274 VGLL3A8MV65 326 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 GPR37L1O60883 481 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 MAP2K1Q02750 393 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-214ENST00000565274 UBAP2LQ14157 1087 aaKnown RBP6.33□□□□□ -1.4
CAPN3-214ENST00000565274 CFAP70Q5T0N1 1121 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 WDR63Q8IWG1 891 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.33□□□□□ -1.4
CAPN3-214ENST00000565274 GOLGA6L1Q8N7Z2 621 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 ZNF513Q8N8E2 541 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-214ENST00000565274 VTI1AQ96AJ9 217 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 GPATCH3Q96I76 525 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 RAI14Q9P0K7 980 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 SERPINA10Q9UK55 444 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 FRMD4BQ9Y2L6 1034 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 KIDINS220Q9ULH0 1771 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 POGZQ7Z3K3 1410 aa6.33□□□□□ -1.4
CAPN3-214ENST00000565274 CFAP74Q9C0B2 1584 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 CGNL1Q0VF96 1302 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 BNIP3LO60238 219 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 CT47B1P0C2W7 299 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-214ENST00000565274 FGFR3P22607 806 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 BDNFP23560 247 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 GYS2P54840 703 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 KCNA1Q09470 495 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 TLR1Q15399 786 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 C8orf34Q49A92 452 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 ESCO1Q5FWF5 840 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 FAM43AQ8N2R8 423 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 BORCS6Q96GS4 357 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 JADE2Q9NQC1 790 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 GEMIN8Q9NWZ8 242 aaKnown RBP6.32□□□□□ -1.4
CAPN3-214ENST00000565274 ATXN7L1Q9ULK2 861 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-214ENST00000565274 HRH3Q9Y5N1 445 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 NEO1Q92859 1461 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 NPATQ14207 1427 aa6.32□□□□□ -1.4
CAPN3-214ENST00000565274 PPRC1Q5VV67 1664 aaKnown RBP6.31□□□□□ -1.4
CAPN3-214ENST00000565274 CCDC194A0A1B0GVG4 234 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 PARNO95453 639 aaKnown RBP6.31□□□□□ -1.4
CAPN3-214ENST00000565274 TCF3P15923 654 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 PLA2G4AP47712 749 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 ZKSCAN8Q15776 578 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-214ENST00000565274 OXLD1Q5BKU9 147 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 CYB5RLQ6IPT4 315 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 CREBRFQ8IUR6 639 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 BANK1Q8NDB2 785 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 FRAT1Q92837 279 aaPredicted RBP6.31□□□□□ -1.4
CAPN3-214ENST00000565274 AIDAQ96BJ3 306 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 C8orf37Q96NL8 207 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 IRF2BPLQ9H1B7 796 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 ETNK1Q9HBU6 452 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 DOLKQ9UPQ8 538 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 KIF1BO60333 1816 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 RIMBP3CA6NJZ7 1639 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 RIMBP3BA6NNM3 1639 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 RIMBP3Q9UFD9 1639 aa6.31□□□□□ -1.4
CAPN3-214ENST00000565274 MED14O60244 1454 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 NLRP1Q9C000 1473 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 NEURL1BA8MQ27 555 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 APAF1O14727 1248 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 PLIN1O60240 522 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 SLC20A2Q08357 652 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 LBRQ14739 615 aaKnown RBP6.3□□□□□ -1.4
CAPN3-214ENST00000565274 UTP14CQ5TAP6 766 aaKnown RBP6.3□□□□□ -1.4
CAPN3-214ENST00000565274 C20orf194Q5TEA3 1177 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 LINC00114Q6XXX2 140 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 SMAP1Q8IYB5 467 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-214ENST00000565274 RHBDD1Q8TEB9 315 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 SNRNP27Q8WVK2 155 aaKnown RBP6.3□□□□□ -1.4
CAPN3-214ENST00000565274 RUNDC1Q96C34 613 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 CCDC97Q96F63 343 aaPredicted RBP6.3□□□□□ -1.4
CAPN3-214ENST00000565274 BTBD6Q96KE9 485 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 FRMPD1Q5SYB0 1578 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 ABCC3O15438 1527 aa6.3□□□□□ -1.4
CAPN3-214ENST00000565274 MAPK8IP3Q9UPT6 1336 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 IQSEC2Q5JU85 1478 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 PIK3C2BO00750 1634 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 CFAP69A5D8W1 941 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 C1QTNF9BB2RNN3 333 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 EIF3JO75822 258 aaKnown RBP6.29□□□□□ -1.4
CAPN3-214ENST00000565274 HSP90AA1P07900 732 aaKnown RBP6.29□□□□□ -1.4
CAPN3-214ENST00000565274 SSR1P43307 286 aaKnown RBP6.29□□□□□ -1.4
CAPN3-214ENST00000565274 USP4Q13107 963 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 UVSSAQ2YD98 709 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 SLFNL1Q499Z3 407 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 TAF3Q5VWG9 929 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 CD109Q6YHK3 1445 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 SLCO4C1Q6ZQN7 724 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 TBC1D9Q6ZT07 1266 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 AMOTL1Q8IY63 956 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 GNL3LQ9NVN8 582 aaKnown RBP6.29□□□□□ -1.4
CAPN3-214ENST00000565274 HECW2Q9P2P5 1572 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 NRBP1Q9UHY1 535 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 COMMD10Q9Y6G5 202 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 ANKRD36BQ8N2N9 1353 aa6.29□□□□□ -1.4
CAPN3-214ENST00000565274 U2SURPO15042 1029 aaKnown RBP6.28□□□□□ -1.4
CAPN3-214ENST00000565274 HOXB4P17483 251 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-214ENST00000565274 COPB2P35606 906 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms