RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CCDC93Q567U6 631 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 AKAP4Q5JQC9 854 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ADALQ6DHV7 355 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 SYNE3Q6ZMZ3 975 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 SMARCE1Q969G3 411 aa23.75■■□□□ 1.39
MAP1LC3B-206ENST00000564844 SASH3O75995 380 aa23.74■■□□□ 1.39
MAP1LC3B-206ENST00000564844 PNOCQ13519 176 aa23.74■■□□□ 1.39
MAP1LC3B-206ENST00000564844 FKBP4Q02790 459 aaKnown RBP eCLIP23.74■■□□□ 1.39
MAP1LC3B-206ENST00000564844 CCDC150Q8NCX0 1101 aa23.74■■□□□ 1.39
MAP1LC3B-206ENST00000564844 CARMIL3Q8ND23 1372 aa23.74■■□□□ 1.39
MAP1LC3B-206ENST00000564844 CACNA1FO60840 1977 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 KIF28PB7ZC32 967 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 GNG11P61952 73 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 NCAPHQ15003 741 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 DESI2Q9BSY9 194 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 KIF2AO00139 706 aaPredicted RBP23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 KARSQ15046 597 aaKnown RBP23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 HOXB7P09629 217 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 PFKFB1P16118 471 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 KRBA2Q6ZNG9 492 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 CLIC6Q96NY7 704 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 WDR24Q96S15 920 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 IRX2Q9BZI1 471 aaPredicted RBP23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 HDAC5Q9UQL6 1122 aa23.73■■□□□ 1.39
MAP1LC3B-206ENST00000564844 OAS2P29728 719 aaKnown RBP23.72■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ADKP55263 362 aaKnown RBP23.72■■□□□ 1.39
MAP1LC3B-206ENST00000564844 TPM4P67936 248 aa23.72■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ZNF594Q96JF6 807 aaPredicted RBP23.72■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ARGLU1Q9NWB6 273 aaPredicted RBP23.72■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.72■■□□□ 1.39
MAP1LC3B-206ENST00000564844 A0A087WZG4 1122 aa23.72■■□□□ 1.39
MAP1LC3B-206ENST00000564844 CERS3Q8IU89 383 aa23.72■■□□□ 1.39
MAP1LC3B-206ENST00000564844 ADGRL3Q9HAR2 1447 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 CPLX1O14810 134 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 WDHD1O75717 1129 aaPredicted RBP23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 HSPD1P10809 573 aaKnown RBP23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 PDIA6Q15084 440 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 LMBR1LQ6UX01 489 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 IP6K1Q92551 441 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 DDX21Q9NR30 783 aaKnown RBP eCLIP23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 WASHC4Q2M389 1173 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 TRIM65Q6PJ69 517 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 FANCLQ9NW38 375 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 IMPACTQ9P2X3 320 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 DENND2AQ9ULE3 1009 aa23.71■■□□□ 1.39
MAP1LC3B-206ENST00000564844 RGPD8O14715 1765 aaPredicted RBP23.7■■□□□ 1.39
MAP1LC3B-206ENST00000564844 KLF18A0A0U1RQI7 1052 aa23.7■■□□□ 1.39
MAP1LC3B-206ENST00000564844 LLPHQ9BRT6 129 aaKnown RBP23.7■■□□□ 1.39
MAP1LC3B-206ENST00000564844 GOLGA8BA8MQT2 603 aa23.7■■□□□ 1.38
MAP1LC3B-206ENST00000564844 SKIDA1Q1XH10 827 aa23.7■■□□□ 1.38
MAP1LC3B-206ENST00000564844 PHF8Q9UPP1 1060 aa23.7■■□□□ 1.38
MAP1LC3B-206ENST00000564844 FMN2Q9NZ56 1722 aa23.7■■□□□ 1.38
MAP1LC3B-206ENST00000564844 RAD51AP2Q09MP3 1159 aa23.7■■□□□ 1.38
MAP1LC3B-206ENST00000564844 PSDA5PKW4 1024 aaPredicted RBP23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 TOP1P11387 765 aaKnown RBP23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 KBTBD3Q8NAB2 608 aa23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 NFATC2IPQ8NCF5 419 aa23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 PAG1Q9NWQ8 432 aa23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 FOXN1O15353 648 aa23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 NLRP12P59046 1061 aa23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 EXOSC10Q01780 885 aaKnown RBP23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 RTEL1Q9NZ71 1219 aa23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 MROH7-TTC4A0A0A0MT08 1334 aa23.69■■□□□ 1.38
MAP1LC3B-206ENST00000564844 ZNF827Q17R98 1081 aa23.68■■□□□ 1.38
MAP1LC3B-206ENST00000564844 MYSM1Q5VVJ2 828 aa23.68■■□□□ 1.38
MAP1LC3B-206ENST00000564844 NLRP2Q9NX02 1062 aa23.68■■□□□ 1.38
MAP1LC3B-206ENST00000564844 NWD1Q149M9 1564 aa23.68■■□□□ 1.38
MAP1LC3B-206ENST00000564844 UBE2Q2LH0YL09 131 aa23.68■■□□□ 1.38
MAP1LC3B-206ENST00000564844 TFRCP02786 760 aaKnown RBP23.68■■□□□ 1.38
MAP1LC3B-206ENST00000564844 HAUS7Q99871 368 aa23.68■■□□□ 1.38
MAP1LC3B-206ENST00000564844 TADA3O75528 432 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 ZRANB2O95218 330 aaKnown RBP eCLIP23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 ANKRD13DQ6ZTN6 518 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 C10orf67Q8IYJ2 551 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 TRMT44Q8IYL2 757 aaKnown RBP23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 HSD3B7Q9H2F3 369 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 PARP3Q9Y6F1 533 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 NEDD4P46934 1319 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 TRIM66O15016 1216 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 SYKP43405 635 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 LMAN1P49257 510 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 SMC1AQ14683 1233 aaKnown RBP23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 REXO1L1PQ8IX06 675 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 CPLX3Q8WVH0 158 aa23.67■■□□□ 1.38
MAP1LC3B-206ENST00000564844 M0R2C6 588 aa23.66■■□□□ 1.38
MAP1LC3B-206ENST00000564844 ATP2B1P20020 1258 aa23.66■■□□□ 1.38
MAP1LC3B-206ENST00000564844 TOGARAM2Q6ZUX3 1019 aa23.66■■□□□ 1.38
MAP1LC3B-206ENST00000564844 ORAI2Q96SN7 254 aa23.66■■□□□ 1.38
MAP1LC3B-206ENST00000564844 PUF60Q9UHX1 559 aaKnown RBP23.66■■□□□ 1.38
MAP1LC3B-206ENST00000564844 LCMT1Q9UIC8 334 aa23.66■■□□□ 1.38
MAP1LC3B-206ENST00000564844 A0A0U1RQJ8 604 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 ATRIPQ8WXE1 791 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 CRYBG1Q9Y4K1 1723 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 TBC1D8O95759 1140 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 MCM6Q14566 821 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 MTF1Q14872 753 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 WWC2Q6AWC2 1192 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 PHKBQ93100 1093 aa23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 HMGB1P09429 215 aaKnown RBP23.65■■□□□ 1.38
MAP1LC3B-206ENST00000564844 CASQ1P31415 396 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms