RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 HSPA6P17066 643 aa21.43■■□□□ 1.02
USB1-209ENST00000564387 SAMD7Q7Z3H4 446 aa21.43■■□□□ 1.02
USB1-209ENST00000564387 GPR108Q9NPR9 543 aa21.43■■□□□ 1.02
USB1-209ENST00000564387 SURF6O75683 361 aaKnown RBP21.42■■□□□ 1.02
USB1-209ENST00000564387 PASKQ96RG2 1323 aa21.42■■□□□ 1.02
USB1-209ENST00000564387 A0A1B0GUL7 405 aa21.41■■□□□ 1.02
USB1-209ENST00000564387 TIMM10P62072 90 aa21.41■■□□□ 1.02
USB1-209ENST00000564387 VPS37DQ86XT2 251 aa21.41■■□□□ 1.02
USB1-209ENST00000564387 TBC1D10BQ4KMP7 808 aaPredicted RBP21.4■■□□□ 1.02
USB1-209ENST00000564387 CNTROBQ8N137 903 aa21.4■■□□□ 1.02
USB1-209ENST00000564387 MYOZ2Q9NPC6 264 aa21.4■■□□□ 1.02
USB1-209ENST00000564387 CLEC11AQ9Y240 323 aa21.4■■□□□ 1.02
USB1-209ENST00000564387 KIF4BQ2VIQ3 1234 aa21.39■■□□□ 1.01
USB1-209ENST00000564387 MAP1SQ66K74 1059 aaPredicted RBP21.39■■□□□ 1.01
USB1-209ENST00000564387 OGFOD1Q8N543 542 aa21.39■■□□□ 1.01
USB1-209ENST00000564387 FBXW7Q969H0 707 aa21.39■■□□□ 1.01
USB1-209ENST00000564387 ZBED3Q96IU2 234 aaPredicted RBP21.39■■□□□ 1.01
USB1-209ENST00000564387 SEMA3EO15041 775 aa21.38■■□□□ 1.01
USB1-209ENST00000564387 HMMRO75330 724 aa21.38■■□□□ 1.01
USB1-209ENST00000564387 ADORA1P30542 326 aa21.38■■□□□ 1.01
USB1-209ENST00000564387 KIAA0825Q8IV33 1275 aa21.38■■□□□ 1.01
USB1-209ENST00000564387 MTMR14Q8NCE2 650 aa21.38■■□□□ 1.01
USB1-209ENST00000564387 XAGE2Q96GT9 111 aa21.38■■□□□ 1.01
USB1-209ENST00000564387 PHKA1P46020 1223 aa21.37■■□□□ 1.01
USB1-209ENST00000564387 MFSD14BQ5SR56 506 aa21.37■■□□□ 1.01
USB1-209ENST00000564387 CCDC102BQ68D86 513 aa21.37■■□□□ 1.01
USB1-209ENST00000564387 TBC1D22AQ8WUA7 517 aa21.37■■□□□ 1.01
USB1-209ENST00000564387 IQSEC3Q9UPP2 1182 aaPredicted RBP21.37■■□□□ 1.01
USB1-209ENST00000564387 COL1A1P02452 1464 aaPredicted RBP21.37■■□□□ 1.01
USB1-209ENST00000564387 PDS5AQ29RF7 1337 aaKnown RBP21.36■■□□□ 1.01
USB1-209ENST00000564387 APLP1P51693 650 aa21.36■■□□□ 1.01
USB1-209ENST00000564387 HSP90AB4PQ58FF6 505 aa21.36■■□□□ 1.01
USB1-209ENST00000564387 TNNI3KQ59H18 835 aa21.36■■□□□ 1.01
USB1-209ENST00000564387 GNL3LQ9NVN8 582 aaKnown RBP21.36■■□□□ 1.01
USB1-209ENST00000564387 HDAC9Q9UKV0 1011 aa21.36■■□□□ 1.01
USB1-209ENST00000564387 JAG2Q9Y219 1238 aa21.36■■□□□ 1.01
USB1-209ENST00000564387 SUGT1Q9Y2Z0 365 aa21.36■■□□□ 1.01
USB1-209ENST00000564387 FPGT-TNNI3KV9GXZ4 949 aa21.36■■□□□ 1.01
USB1-209ENST00000564387 CEP350Q5VT06 3117 aa21.36■■□□□ 1.01
USB1-209ENST00000564387 RBM26Q5T8P6 1007 aaKnown RBP21.35■■□□□ 1.01
USB1-209ENST00000564387 ERC1Q8IUD2 1116 aa21.35■■□□□ 1.01
USB1-209ENST00000564387 EXOC6BQ9Y2D4 811 aa21.35■■□□□ 1.01
USB1-209ENST00000564387 PITPNM2Q9BZ72 1349 aa21.34■■□□□ 1.01
USB1-209ENST00000564387 SALL1Q9NSC2 1324 aa21.34■■□□□ 1.01
USB1-209ENST00000564387 WNT10BO00744 389 aa21.34■■□□□ 1.01
USB1-209ENST00000564387 FRAT2O75474 233 aaPredicted RBP21.34■■□□□ 1.01
USB1-209ENST00000564387 OS9Q13438 667 aaPredicted RBP21.34■■□□□ 1.01
USB1-209ENST00000564387 SCARF1Q14162 830 aa21.34■■□□□ 1.01
USB1-209ENST00000564387 CDC37L1Q7L3B6 337 aa21.34■■□□□ 1.01
USB1-209ENST00000564387 WDR66Q8TBY9 1149 aa21.34■■□□□ 1.01
USB1-209ENST00000564387 MRIQ9BWK5 157 aa21.34■■□□□ 1.01
USB1-209ENST00000564387 DENND2AQ9ULE3 1009 aa21.34■■□□□ 1.01
USB1-209ENST00000564387 MYH13Q9UKX3 1938 aa21.33■■□□□ 1.01
USB1-209ENST00000564387 GRIK5Q16478 980 aa21.33■■□□□ 1.01
USB1-209ENST00000564387 NEUROD6Q96NK8 337 aa21.33■■□□□ 1.01
USB1-209ENST00000564387 ASTN2O75129 1339 aaPredicted RBP21.32■■□□□ 1
USB1-209ENST00000564387 ARID4AP29374 1257 aaPredicted RBP21.32■■□□□ 1
USB1-209ENST00000564387 HDLBPQ00341 1268 aaKnown RBP21.32■■□□□ 1
USB1-209ENST00000564387 CHAF1AQ13111 956 aaPredicted RBP21.32■■□□□ 1
USB1-209ENST00000564387 RASGRF1Q13972 1273 aa21.32■■□□□ 1
USB1-209ENST00000564387 NBPF9Q3BBW0 867 aa21.32■■□□□ 1
USB1-209ENST00000564387 EAF2Q96CJ1 260 aaPredicted RBP21.32■■□□□ 1
USB1-209ENST00000564387 CRBNQ96SW2 442 aa21.32■■□□□ 1
USB1-209ENST00000564387 SERPINA10Q9UK55 444 aa21.32■■□□□ 1
USB1-209ENST00000564387 POLR2AP24928 1970 aaKnown RBP21.32■■□□□ 1
USB1-209ENST00000564387 RAB11FIP3O75154 756 aa21.31■■□□□ 1
USB1-209ENST00000564387 AAMPQ13685 434 aa21.31■■□□□ 1
USB1-209ENST00000564387 RHPN1Q8TCX5 695 aa21.31■■□□□ 1
USB1-209ENST00000564387 ZNF512BQ96KM6 892 aaPredicted RBP21.31■■□□□ 1
USB1-209ENST00000564387 GLIS2Q9BZE0 524 aaPredicted RBP21.31■■□□□ 1
USB1-209ENST00000564387 GGA3Q9NZ52 723 aa21.31■■□□□ 1
USB1-209ENST00000564387 TTF2Q9UNY4 1162 aaKnown RBP21.31■■□□□ 1
USB1-209ENST00000564387 PCDHB15Q9Y5E8 787 aa21.31■■□□□ 1
USB1-209ENST00000564387 DCPSQ96C86 337 aaKnown RBP21.3■■□□□ 1
USB1-209ENST00000564387 KIF1BPQ96EK5 621 aa21.3■■□□□ 1
USB1-209ENST00000564387 DBNDD2Q9BQY9 259 aa21.3■■□□□ 1
USB1-209ENST00000564387 DBNLQ9UJU6 430 aaKnown RBP21.3■■□□□ 1
USB1-209ENST00000564387 SPDYE2BA6NHP3 402 aa21.29■■□□□ 1
USB1-209ENST00000564387 F8W031 263 aaPredicted RBP21.29■■□□□ 1
USB1-209ENST00000564387 TRAF5O00463 557 aa21.29■■□□□ 1
USB1-209ENST00000564387 SPDYE6P0CI01 402 aa21.29■■□□□ 1
USB1-209ENST00000564387 DLGAP5Q15398 846 aa21.29■■□□□ 1
USB1-209ENST00000564387 CFAP100Q494V2 611 aa21.29■■□□□ 1
USB1-209ENST00000564387 ANGEL2Q5VTE6 544 aaKnown RBP21.29■■□□□ 1
USB1-209ENST00000564387 KRT26Q7Z3Y9 468 aa21.29■■□□□ 1
USB1-209ENST00000564387 DCTPP1Q9H773 170 aa21.29■■□□□ 1
USB1-209ENST00000564387 CREBZFQ9NS37 354 aa21.29■■□□□ 1
USB1-209ENST00000564387 SUPT16HQ9Y5B9 1047 aaKnown RBP21.29■■□□□ 1
USB1-209ENST00000564387 TRPM7Q96QT4 1865 aa21.28■■□□□ 1
USB1-209ENST00000564387 UQCRFS1P1P0C7P4 283 aa21.28■■□□□ 1
USB1-209ENST00000564387 FMR1Q06787 632 aaKnown RBP eCLIP21.28■■□□□ 1
USB1-209ENST00000564387 CST9Q5W186 159 aa21.28■■□□□ 1
USB1-209ENST00000564387 USP48Q86UV5 1035 aa21.28■■□□□ 1
USB1-209ENST00000564387 DNAJC5GQ8N7S2 189 aa21.28■■□□□ 1
USB1-209ENST00000564387 PRMT6Q96LA8 375 aaPredicted RBP21.28■■□□□ 1
USB1-209ENST00000564387 HMG20BQ9P0W2 317 aa21.28■■□□□ 1
USB1-209ENST00000564387 PCDHAC2Q9Y5I4 1007 aa21.28■■□□□ 1
USB1-209ENST00000564387 ECM29Q5VYK3 1845 aa21.27■■□□□ 1
USB1-209ENST00000564387 TMEM88BA6NKF7 163 aa21.27■■□□□ 1
USB1-209ENST00000564387 CRKP46108 304 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms