RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 TARSP26639 723 aaKnown RBP9.09□□□□□ -0.95
HERPUD1-208ENST00000563911 VWA5B2Q8N398 1253 aa9.09□□□□□ -0.95
HERPUD1-208ENST00000563911 TRERF1Q96PN7 1200 aa9.09□□□□□ -0.95
HERPUD1-208ENST00000563911 ZFYVE28Q9HCC9 887 aa9.09□□□□□ -0.95
HERPUD1-208ENST00000563911 ABI2Q9NYB9 513 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-208ENST00000563911 KIAA1522Q9P206 1035 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-208ENST00000563911 ATXN7L1Q9ULK2 861 aaPredicted RBP9.09□□□□□ -0.95
HERPUD1-208ENST00000563911 GRIN2CQ14957 1233 aa9.08□□□□□ -0.96
HERPUD1-208ENST00000563911 PARP2Q9UGN5 583 aa9.08□□□□□ -0.96
HERPUD1-208ENST00000563911 FAM135AQ9P2D6 1515 aa9.08□□□□□ -0.96
HERPUD1-208ENST00000563911 RNF17Q9BXT8 1623 aaKnown RBP9.08□□□□□ -0.96
HERPUD1-208ENST00000563911 SETD1AO15047 1707 aaKnown RBP9.08□□□□□ -0.96
HERPUD1-208ENST00000563911 GPR25O00155 361 aa9.07□□□□□ -0.96
HERPUD1-208ENST00000563911 SPEM2Q0P670 501 aa9.07□□□□□ -0.96
HERPUD1-208ENST00000563911 USPL1Q5W0Q7 1092 aa9.07□□□□□ -0.96
HERPUD1-208ENST00000563911 SV2AQ7L0J3 742 aa9.07□□□□□ -0.96
HERPUD1-208ENST00000563911 C1orf127Q8N9H9 656 aa9.07□□□□□ -0.96
HERPUD1-208ENST00000563911 CFHR5Q9BXR6 569 aa9.07□□□□□ -0.96
HERPUD1-208ENST00000563911 CNTN3Q9P232 1028 aa9.07□□□□□ -0.96
HERPUD1-208ENST00000563911 FAM135BQ49AJ0 1406 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 ABCC3O15438 1527 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 RARAP10276 462 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 FGFR3P22607 806 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 FBF1Q8TES7 1133 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 BHMTQ93088 406 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 PMEPA1Q969W9 287 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 FAM161BQ96MY7 647 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 MRS2Q9HD23 443 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 RNF19AQ9NV58 838 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 HCN2Q9UL51 889 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 MTUS2Q5JR59 1369 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 ERVK-7P63135 1459 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 ARHGAP23Q9P227 1491 aa9.06□□□□□ -0.96
HERPUD1-208ENST00000563911 MROH1Q8NDA8 1641 aa9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 POLR3DP05423 398 aaPredicted RBP9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 NFKB1P19838 968 aa9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 CES1P23141 567 aa9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 PSMD2Q13200 908 aa9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 RAB44Q7Z6P3 723 aaPredicted RBP9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 CCDC74AQ96AQ1 378 aa9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 SLC30A3Q99726 388 aa9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 ZFATQ9P243 1243 aa9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 UBR1Q8IWV7 1749 aa9.05□□□□□ -0.96
HERPUD1-208ENST00000563911 SYNMO15061 1565 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 CAMSAP2Q08AD1 1489 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 CCDC141Q6ZP82 1450 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 TMEM94Q12767 1356 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 EREGO14944 169 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 MMP20O60882 483 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 NEUROD1Q13562 356 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 CHRDQ9H2X0 955 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 NLRP2Q9NX02 1062 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 PRR12Q9ULL5 1215 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 CEP162Q5TB80 1403 aa9.04□□□□□ -0.96
HERPUD1-208ENST00000563911 SCAF11Q99590 1463 aaKnown RBP9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 PHF20L1A8MW92 1017 aa9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 ITGAEP38570 1179 aa9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 DAB2P98082 770 aa9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 CTBSQ01459 385 aa9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 TMC4Q7Z404 712 aa9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 EPS8L3Q8TE67 593 aaKnown RBP9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 NANOS1Q8WY41 292 aaKnown RBP9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 EFCC1Q9HA90 598 aa9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 MAP3K1Q13233 1512 aa9.03□□□□□ -0.96
HERPUD1-208ENST00000563911 SLIT1O75093 1534 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 SORBS3O60504 671 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 CYP2E1P05181 493 aaPredicted RBP9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 PSAPP07602 524 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 GNA15P30679 374 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 IRS1P35568 1242 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 VEGFBP49765 207 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 FAM182BQ5T319 152 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 OR13H1Q8NG92 308 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 SLC26A8Q96RN1 970 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 KANSL3Q9P2N6 904 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 NXF1Q9UBU9 619 aaKnown RBP9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 SPG7Q9UQ90 795 aa9.02□□□□□ -0.97
HERPUD1-208ENST00000563911 ROBO1Q9Y6N7 1651 aa9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 VAMP1P23763 118 aa9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 TSNAXIP1Q2TAA8 658 aa9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 PI16Q6UXB8 463 aa9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 FRMD6Q96NE9 622 aa9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 NPHS2Q9NP85 383 aa9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 TLR7Q9NYK1 1049 aaKnown RBP9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 VTI1BQ9UEU0 232 aa9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 CFAP65Q6ZU64 1925 aaKnown RBP9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 LRP6O75581 1613 aa9.01□□□□□ -0.97
HERPUD1-208ENST00000563911 TET3O43151 1660 aa9□□□□□ -0.97
HERPUD1-208ENST00000563911 SRCAPQ6ZRS2 3230 aa9□□□□□ -0.97
HERPUD1-208ENST00000563911 GADD45BO75293 160 aaPredicted RBP9□□□□□ -0.97
HERPUD1-208ENST00000563911 MAP3K6O95382 1288 aa9□□□□□ -0.97
HERPUD1-208ENST00000563911 BMP4P12644 408 aa9□□□□□ -0.97
HERPUD1-208ENST00000563911 KCNA6P17658 529 aa9□□□□□ -0.97
HERPUD1-208ENST00000563911 GALNT12Q8IXK2 581 aa9□□□□□ -0.97
HERPUD1-208ENST00000563911 IGFLR1Q9H665 355 aa9□□□□□ -0.97
HERPUD1-208ENST00000563911 EHBP1L1Q8N3D4 1523 aa9□□□□□ -0.97
HERPUD1-208ENST00000563911 CEP152O94986 1710 aa9□□□□□ -0.97
HERPUD1-208ENST00000563911 PLAURQ03405 335 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms