RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 C6orf229H3BNL8 230 aa23.34■■□□□ 1.33
SYNGR3-203ENST00000563869 EGFRP00533 1210 aa23.34■■□□□ 1.33
SYNGR3-203ENST00000563869 KCNJ4P48050 445 aa23.34■■□□□ 1.33
SYNGR3-203ENST00000563869 CCDC102AQ96A19 550 aa23.34■■□□□ 1.33
SYNGR3-203ENST00000563869 DCPSQ96C86 337 aaKnown RBP23.34■■□□□ 1.33
SYNGR3-203ENST00000563869 CEP126Q9P2H0 1117 aa23.34■■□□□ 1.33
SYNGR3-203ENST00000563869 POLLQ9UGP5 575 aa23.34■■□□□ 1.33
SYNGR3-203ENST00000563869 AKAP2Q9Y2D5 859 aa23.34■■□□□ 1.33
SYNGR3-203ENST00000563869 NOP58Q9Y2X3 529 aaKnown RBP23.34■■□□□ 1.33
SYNGR3-203ENST00000563869 AKAP11Q9UKA4 1901 aa23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 COL4A1P02462 1669 aa23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 PNMA6EA0A0J9YXQ4 647 aa23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 ECE2O60344 883 aa23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 RAB11FIP3O75154 756 aa23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 GPSM2P81274 684 aa23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 CHRNDQ07001 517 aa23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 OS9Q13438 667 aaPredicted RBP23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 METTL24Q5JXM2 366 aa23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 RIPOR2Q9Y4F9 1068 aa23.33■■□□□ 1.33
SYNGR3-203ENST00000563869 UBE4AQ14139 1066 aa23.32■■□□□ 1.32
SYNGR3-203ENST00000563869 RWDD1Q9H446 243 aaPredicted RBP23.32■■□□□ 1.32
SYNGR3-203ENST00000563869 ADM5C9JUS6 153 aa23.31■■□□□ 1.32
SYNGR3-203ENST00000563869 SURF6O75683 361 aaKnown RBP23.31■■□□□ 1.32
SYNGR3-203ENST00000563869 KIF23Q02241 960 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-203ENST00000563869 HDAC1Q13547 482 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-203ENST00000563869 RBM26Q5T8P6 1007 aaKnown RBP23.31■■□□□ 1.32
SYNGR3-203ENST00000563869 ZNF594Q96JF6 807 aaPredicted RBP23.31■■□□□ 1.32
SYNGR3-203ENST00000563869 KCNQ5Q9NR82 932 aa23.31■■□□□ 1.32
SYNGR3-203ENST00000563869 SCN9AQ15858 1988 aa23.31■■□□□ 1.32
SYNGR3-203ENST00000563869 PDE8BO95263 885 aa23.3■■□□□ 1.32
SYNGR3-203ENST00000563869 ZNF157P51786 506 aaPredicted RBP23.3■■□□□ 1.32
SYNGR3-203ENST00000563869 DOK7Q18PE1 504 aa23.3■■□□□ 1.32
SYNGR3-203ENST00000563869 EXOC6Q8TAG9 804 aa23.3■■□□□ 1.32
SYNGR3-203ENST00000563869 PUM3Q15397 648 aaKnown RBP23.29■■□□□ 1.32
SYNGR3-203ENST00000563869 KIF4BQ2VIQ3 1234 aa23.29■■□□□ 1.32
SYNGR3-203ENST00000563869 TBC1D16Q8TBP0 767 aa23.29■■□□□ 1.32
SYNGR3-203ENST00000563869 GCC1Q96CN9 775 aa23.29■■□□□ 1.32
SYNGR3-203ENST00000563869 ZC3H12CQ9C0D7 883 aaKnown RBP23.29■■□□□ 1.32
SYNGR3-203ENST00000563869 ZBTB47Q9UFB7 747 aaPredicted RBP23.29■■□□□ 1.32
SYNGR3-203ENST00000563869 ZNF804BA4D1E1 1349 aa23.29■■□□□ 1.32
SYNGR3-203ENST00000563869 MED23Q9ULK4 1368 aa23.28■■□□□ 1.32
SYNGR3-203ENST00000563869 UFL1O94874 794 aa23.28■■□□□ 1.32
SYNGR3-203ENST00000563869 C15orf52Q6ZUT6 534 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-203ENST00000563869 SIL1Q9H173 461 aa23.28■■□□□ 1.32
SYNGR3-203ENST00000563869 GPR108Q9NPR9 543 aa23.28■■□□□ 1.32
SYNGR3-203ENST00000563869 RNF186Q9NXI6 227 aa23.28■■□□□ 1.32
SYNGR3-203ENST00000563869 TNRC18O15417 2968 aaPredicted RBP23.27■■□□□ 1.32
SYNGR3-203ENST00000563869 TRPA1O75762 1119 aa23.27■■□□□ 1.32
SYNGR3-203ENST00000563869 SLC10A3P09131 477 aa23.27■■□□□ 1.32
SYNGR3-203ENST00000563869 VIL1P09327 827 aaKnown RBP23.27■■□□□ 1.32
SYNGR3-203ENST00000563869 IFIT1P09914 478 aaKnown RBP23.27■■□□□ 1.32
SYNGR3-203ENST00000563869 SULF1Q8IWU6 871 aa23.27■■□□□ 1.32
SYNGR3-203ENST00000563869 KIF1BPQ96EK5 621 aa23.27■■□□□ 1.32
SYNGR3-203ENST00000563869 PCDH10Q9P2E7 1040 aa23.27■■□□□ 1.32
SYNGR3-203ENST00000563869 PSME4Q14997 1843 aa23.26■■□□□ 1.31
SYNGR3-203ENST00000563869 G3V3G9 751 aa23.26■■□□□ 1.31
SYNGR3-203ENST00000563869 SLC5A1P13866 664 aa23.26■■□□□ 1.31
SYNGR3-203ENST00000563869 DCAF8Q5TAQ9 597 aa23.26■■□□□ 1.31
SYNGR3-203ENST00000563869 ATG9AQ7Z3C6 839 aa23.26■■□□□ 1.31
SYNGR3-203ENST00000563869 LPIN2Q92539 896 aa23.26■■□□□ 1.31
SYNGR3-203ENST00000563869 GGA3Q9NZ52 723 aa23.26■■□□□ 1.31
SYNGR3-203ENST00000563869 LRRC24Q50LG9 513 aa23.25■■□□□ 1.31
SYNGR3-203ENST00000563869 CAVIN4Q5BKX8 364 aa23.25■■□□□ 1.31
SYNGR3-203ENST00000563869 KLHDC4Q8TBB5 520 aa23.25■■□□□ 1.31
SYNGR3-203ENST00000563869 CSRNP1Q96S65 589 aa23.25■■□□□ 1.31
SYNGR3-203ENST00000563869 DCTPP1Q9H773 170 aa23.25■■□□□ 1.31
SYNGR3-203ENST00000563869 PA2G4Q9UQ80 394 aaKnown RBP23.25■■□□□ 1.31
SYNGR3-203ENST00000563869 ARAP2Q8WZ64 1704 aa23.25■■□□□ 1.31
SYNGR3-203ENST00000563869 ZNF609O15014 1411 aa23.25■■□□□ 1.31
SYNGR3-203ENST00000563869 SIRT2Q8IXJ6 389 aa23.24■■□□□ 1.31
SYNGR3-203ENST00000563869 VGLL2Q8N8G2 317 aa23.24■■□□□ 1.31
SYNGR3-203ENST00000563869 CDCA5Q96FF9 252 aa23.24■■□□□ 1.31
SYNGR3-203ENST00000563869 PUS3Q9BZE2 481 aaKnown RBP23.24■■□□□ 1.31
SYNGR3-203ENST00000563869 PCDHB15Q9Y5E8 787 aa23.24■■□□□ 1.31
SYNGR3-203ENST00000563869 ZNF804AQ7Z570 1209 aa23.23■■□□□ 1.31
SYNGR3-203ENST00000563869 REM2Q8IYK8 340 aaPredicted RBP23.23■■□□□ 1.31
SYNGR3-203ENST00000563869 CLASRPQ8N2M8 674 aaKnown RBP23.23■■□□□ 1.31
SYNGR3-203ENST00000563869 ASTN2O75129 1339 aaPredicted RBP23.23■■□□□ 1.31
SYNGR3-203ENST00000563869 ZNF280AP59817 542 aaPredicted RBP23.22■■□□□ 1.31
SYNGR3-203ENST00000563869 ATP2B3Q16720 1220 aa23.22■■□□□ 1.31
SYNGR3-203ENST00000563869 AGBL3Q8NEM8 1001 aa23.22■■□□□ 1.31
SYNGR3-203ENST00000563869 GNL3LQ9NVN8 582 aaKnown RBP23.22■■□□□ 1.31
SYNGR3-203ENST00000563869 MYH13Q9UKX3 1938 aa23.21■■□□□ 1.31
SYNGR3-203ENST00000563869 ZBTB22O15209 634 aa23.21■■□□□ 1.31
SYNGR3-203ENST00000563869 IRX6P78412 446 aaPredicted RBP23.21■■□□□ 1.31
SYNGR3-203ENST00000563869 PODNQ7Z5L7 613 aa23.21■■□□□ 1.31
SYNGR3-203ENST00000563869 VPS37DQ86XT2 251 aa23.21■■□□□ 1.31
SYNGR3-203ENST00000563869 LRRCC1Q9C099 1032 aa23.21■■□□□ 1.31
SYNGR3-203ENST00000563869 COA1Q9GZY4 146 aa23.21■■□□□ 1.31
SYNGR3-203ENST00000563869 PAPPA2Q9BXP8 1791 aa23.21■■□□□ 1.31
SYNGR3-203ENST00000563869 SOX10P56693 466 aa23.2■■□□□ 1.3
SYNGR3-203ENST00000563869 FKBP1BP68106 108 aa23.2■■□□□ 1.3
SYNGR3-203ENST00000563869 SCARF1Q14162 830 aa23.2■■□□□ 1.3
SYNGR3-203ENST00000563869 ANGEL2Q5VTE6 544 aaKnown RBP23.2■■□□□ 1.3
SYNGR3-203ENST00000563869 RSBN1LQ6PCB5 846 aaPredicted RBP23.2■■□□□ 1.3
SYNGR3-203ENST00000563869 CTU1Q7Z7A3 348 aaKnown RBP23.2■■□□□ 1.3
SYNGR3-203ENST00000563869 RASAL3Q86YV0 1011 aa23.2■■□□□ 1.3
SYNGR3-203ENST00000563869 EXOC6BQ9Y2D4 811 aa23.2■■□□□ 1.3
SYNGR3-203ENST00000563869 PDE4DIPQ5VU43 2346 aa23.2■■□□□ 1.3
SYNGR3-203ENST00000563869 TAF5LO75529 589 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms