RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 FAM9BQ8IZU0 186 aa10.89□□□□□ -0.67
SMG1-209ENST00000563836 NGLY1Q96IV0 654 aa10.89□□□□□ -0.67
SMG1-209ENST00000563836 ATXN7L1Q9ULK2 861 aaPredicted RBP10.89□□□□□ -0.67
SMG1-209ENST00000563836 GJA3Q9Y6H8 435 aa10.89□□□□□ -0.67
SMG1-209ENST00000563836 EDC4Q6P2E9 1401 aaKnown RBP10.89□□□□□ -0.67
SMG1-209ENST00000563836 ATXN7O15265 892 aaPredicted RBP10.88□□□□□ -0.67
SMG1-209ENST00000563836 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMG1-209ENST00000563836 COL26A1Q96A83 441 aa10.88□□□□□ -0.67
SMG1-209ENST00000563836 VTI1AQ96AJ9 217 aa10.88□□□□□ -0.67
SMG1-209ENST00000563836 COG3Q96JB2 828 aa10.88□□□□□ -0.67
SMG1-209ENST00000563836 QTRT2Q9H974 415 aaKnown RBP10.88□□□□□ -0.67
SMG1-209ENST00000563836 MBIPQ9NS73 344 aa10.88□□□□□ -0.67
SMG1-209ENST00000563836 ANKRD26Q9UPS8 1709 aa10.88□□□□□ -0.67
SMG1-209ENST00000563836 TOPAZ1Q8N9V7 1692 aa10.88□□□□□ -0.67
SMG1-209ENST00000563836 ACEP12821 1306 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 TTC21AQ8NDW8 1320 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 MON2Q7Z3U7 1717 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 FAM157BP0CG42 384 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 ATP2B4P23634 1241 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 LRRC69Q6ZNQ3 347 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 ABHD17AQ96GS6 310 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 MYO19Q96H55 970 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMG1-209ENST00000563836 ANKIB1Q9P2G1 1089 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 USTQ9Y2C2 406 aa10.87□□□□□ -0.67
SMG1-209ENST00000563836 RGPD8O14715 1765 aaPredicted RBP10.87□□□□□ -0.67
SMG1-209ENST00000563836 DCCP43146 1447 aa10.86□□□□□ -0.67
SMG1-209ENST00000563836 PPP2R1AP30153 589 aa10.86□□□□□ -0.67
SMG1-209ENST00000563836 TNP2Q05952 138 aa10.86□□□□□ -0.67
SMG1-209ENST00000563836 HIF1AQ16665 826 aa10.86□□□□□ -0.67
SMG1-209ENST00000563836 PMFBP1Q8TBY8 1022 aa10.86□□□□□ -0.67
SMG1-209ENST00000563836 SUSD3Q96L08 255 aa10.86□□□□□ -0.67
SMG1-209ENST00000563836 NEUROD4Q9HD90 331 aa10.86□□□□□ -0.67
SMG1-209ENST00000563836 TMEM94Q12767 1356 aa10.86□□□□□ -0.67
SMG1-209ENST00000563836 KIF1AQ12756 1690 aa10.85□□□□□ -0.67
SMG1-209ENST00000563836 INSM1Q01101 510 aaPredicted RBP10.85□□□□□ -0.67
SMG1-209ENST00000563836 SRSF11Q05519 484 aaKnown RBP10.85□□□□□ -0.67
SMG1-209ENST00000563836 HSH2DQ96JZ2 352 aa10.85□□□□□ -0.67
SMG1-209ENST00000563836 HCN2Q9UL51 889 aa10.85□□□□□ -0.67
SMG1-209ENST00000563836 NUDCQ9Y266 331 aa10.85□□□□□ -0.67
SMG1-209ENST00000563836 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
SMG1-209ENST00000563836 EFSO43281 561 aa10.84□□□□□ -0.67
SMG1-209ENST00000563836 PTCD1O75127 700 aaKnown RBP10.84□□□□□ -0.67
SMG1-209ENST00000563836 NEFMP07197 916 aa10.84□□□□□ -0.67
SMG1-209ENST00000563836 SLURP2P0DP57 97 aa10.84□□□□□ -0.67
SMG1-209ENST00000563836 MAPTP10636 758 aaKnown RBP10.84□□□□□ -0.67
SMG1-209ENST00000563836 MX2P20592 715 aa10.84□□□□□ -0.67
SMG1-209ENST00000563836 FGFR3P22607 806 aa10.84□□□□□ -0.67
SMG1-209ENST00000563836 LORP23490 312 aaPredicted RBP10.84□□□□□ -0.67
SMG1-209ENST00000563836 TNNT2P45379 298 aaPredicted RBP10.84□□□□□ -0.67
SMG1-209ENST00000563836 ZNF280CQ8ND82 737 aa10.84□□□□□ -0.67
SMG1-209ENST00000563836 GGNBP2Q9H3C7 697 aa10.84□□□□□ -0.67
SMG1-209ENST00000563836 PRR36Q9H6K5 1346 aa10.84□□□□□ -0.67
SMG1-209ENST00000563836 DCDC2BA2VCK2 349 aa10.83□□□□□ -0.68
SMG1-209ENST00000563836 CARNS1A5YM72 827 aa10.83□□□□□ -0.68
SMG1-209ENST00000563836 KHNYNO15037 678 aaKnown RBP10.83□□□□□ -0.68
SMG1-209ENST00000563836 SSFA2P28290 1259 aa10.83□□□□□ -0.68
SMG1-209ENST00000563836 HNRNPUQ00839 825 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMG1-209ENST00000563836 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
SMG1-209ENST00000563836 USP6P35125 1406 aa10.83□□□□□ -0.68
SMG1-209ENST00000563836 TTC21BQ7Z4L5 1316 aa10.83□□□□□ -0.68
SMG1-209ENST00000563836 CD163L1Q9NR16 1453 aa10.82□□□□□ -0.68
SMG1-209ENST00000563836 POLR3AO14802 1390 aaPredicted RBP10.82□□□□□ -0.68
SMG1-209ENST00000563836 FYB1O15117 783 aa10.82□□□□□ -0.68
SMG1-209ENST00000563836 LAMC2Q13753 1193 aa10.82□□□□□ -0.68
SMG1-209ENST00000563836 IER5Q5VY09 327 aa10.82□□□□□ -0.68
SMG1-209ENST00000563836 CAPN12Q6ZSI9 719 aa10.82□□□□□ -0.68
SMG1-209ENST00000563836 RETREG2Q8NC44 543 aa10.82□□□□□ -0.68
SMG1-209ENST00000563836 LRFN2Q9ULH4 789 aa10.82□□□□□ -0.68
SMG1-209ENST00000563836 BCS1LQ9Y276 419 aa10.82□□□□□ -0.68
SMG1-209ENST00000563836 STRCP1A6NGW2 1772 aa10.81□□□□□ -0.68
SMG1-209ENST00000563836 ADAMTS2O95450 1211 aa10.81□□□□□ -0.68
SMG1-209ENST00000563836 COX20Q5RI15 118 aa10.81□□□□□ -0.68
SMG1-209ENST00000563836 FAM182BQ5T319 152 aa10.81□□□□□ -0.68
SMG1-209ENST00000563836 MKNK1Q9BUB5 465 aa10.81□□□□□ -0.68
SMG1-209ENST00000563836 KLK14Q9P0G3 267 aa10.81□□□□□ -0.68
SMG1-209ENST00000563836 NSFL1CQ9UNZ2 370 aaKnown RBP10.81□□□□□ -0.68
SMG1-209ENST00000563836 ZNF335Q9H4Z2 1342 aaPredicted RBP10.81□□□□□ -0.68
SMG1-209ENST00000563836 TGFBR3LH3BV60 316 aa10.8□□□□□ -0.68
SMG1-209ENST00000563836 PPM1GO15355 546 aaPredicted RBP10.8□□□□□ -0.68
SMG1-209ENST00000563836 CTBSQ01459 385 aa10.8□□□□□ -0.68
SMG1-209ENST00000563836 TYRO3Q06418 890 aa10.8□□□□□ -0.68
SMG1-209ENST00000563836 DGKZQ13574 1117 aa10.8□□□□□ -0.68
SMG1-209ENST00000563836 C11orf91Q3C1V1 193 aa10.8□□□□□ -0.68
SMG1-209ENST00000563836 ABTB2Q8N961 1025 aa10.8□□□□□ -0.68
SMG1-209ENST00000563836 DMGDHQ9UI17 866 aaKnown RBP10.8□□□□□ -0.68
SMG1-209ENST00000563836 NPHP3Q7Z494 1330 aa10.8□□□□□ -0.68
SMG1-209ENST00000563836 MAP2P11137 1827 aaKnown RBP10.79□□□□□ -0.68
SMG1-209ENST00000563836 C2CD2LO14523 706 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 MAP2K3P46734 347 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 MTHFSP49914 203 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 C16orf46Q6P387 395 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 BTLAQ7Z6A9 289 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 NME9Q86XW9 330 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 ZSCAN1Q8NBB4 408 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 PNISRQ8TF01 805 aaKnown RBP10.79□□□□□ -0.68
SMG1-209ENST00000563836 CEP63Q96MT8 703 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 SAP130Q9H0E3 1048 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 STRN4Q9NRL3 753 aa10.79□□□□□ -0.68
SMG1-209ENST00000563836 C1orf167Q5SNV9 1468 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms