RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 HLFQ16534 295 aa14.77□□□□□ -0.05
HDGFL3-204ENST00000563790 AEBP1Q8IUX7 1158 aa14.77□□□□□ -0.05
HDGFL3-204ENST00000563790 HELBQ8NG08 1087 aaPredicted RBP14.77□□□□□ -0.05
HDGFL3-204ENST00000563790 NBPF3Q9H094 633 aa14.77□□□□□ -0.05
HDGFL3-204ENST00000563790 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.77□□□□□ -0.05
HDGFL3-204ENST00000563790 FAM86C2PA6NEL3 165 aa14.76□□□□□ -0.05
HDGFL3-204ENST00000563790 USP17L8P0C7I0 530 aa14.76□□□□□ -0.05
HDGFL3-204ENST00000563790 BMP1P13497 986 aa14.76□□□□□ -0.05
HDGFL3-204ENST00000563790 PIP4K2AP48426 406 aaPredicted RBP14.76□□□□□ -0.05
HDGFL3-204ENST00000563790 BRI3BPQ8WY22 251 aa14.76□□□□□ -0.05
HDGFL3-204ENST00000563790 GMLQ99445 158 aa14.76□□□□□ -0.05
HDGFL3-204ENST00000563790 BRWD1Q9NSI6 2320 aa14.76□□□□□ -0.05
HDGFL3-204ENST00000563790 COL1A1P02452 1464 aaPredicted RBP14.76□□□□□ -0.05
HDGFL3-204ENST00000563790 GPR179Q6PRD1 2367 aa14.75□□□□□ -0.05
HDGFL3-204ENST00000563790 PSMC4P43686 418 aa14.75□□□□□ -0.05
HDGFL3-204ENST00000563790 RSBN1LQ6PCB5 846 aaPredicted RBP14.75□□□□□ -0.05
HDGFL3-204ENST00000563790 ZNF790Q6PG37 636 aa14.75□□□□□ -0.05
HDGFL3-204ENST00000563790 KCNH6Q9H252 994 aa14.75□□□□□ -0.05
HDGFL3-204ENST00000563790 NCOR2Q9Y618 2525 aa14.75□□□□□ -0.05
HDGFL3-204ENST00000563790 WDHD1O75717 1129 aaPredicted RBP14.74□□□□□ -0.05
HDGFL3-204ENST00000563790 FAM43AQ8N2R8 423 aa14.74□□□□□ -0.05
HDGFL3-204ENST00000563790 MAST4O15021 2626 aa14.73□□□□□ -0.05
HDGFL3-204ENST00000563790 RIMBP2O15034 1052 aa14.73□□□□□ -0.05
HDGFL3-204ENST00000563790 GRIN2CQ14957 1233 aa14.73□□□□□ -0.05
HDGFL3-204ENST00000563790 DOK7Q18PE1 504 aa14.73□□□□□ -0.05
HDGFL3-204ENST00000563790 AKNAD1Q5T1N1 836 aa14.73□□□□□ -0.05
HDGFL3-204ENST00000563790 NLRP3Q96P20 1036 aa14.73□□□□□ -0.05
HDGFL3-204ENST00000563790 COL4A1P02462 1669 aa14.73□□□□□ -0.05
HDGFL3-204ENST00000563790 FAM208BQ5VWN6 2430 aa14.73□□□□□ -0.05
HDGFL3-204ENST00000563790 MAP1BP46821 2468 aaKnown RBP14.72□□□□□ -0.05
HDGFL3-204ENST00000563790 PPP1R12BO60237 982 aaPredicted RBP14.72□□□□□ -0.05
HDGFL3-204ENST00000563790 C11orf49Q9H6J7 331 aa14.72□□□□□ -0.05
HDGFL3-204ENST00000563790 LRRC37A2A6NM11 1700 aa14.72□□□□□ -0.05
HDGFL3-204ENST00000563790 AK9Q5TCS8 1911 aa14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 PRR33A8MZF0 331 aa14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 WNT10BO00744 389 aa14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 INHAP05111 366 aa14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 POTEEQ6S8J3 1075 aa14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 APOBEC3FQ8IUX4 373 aaKnown RBP14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 PPM1EQ8WY54 764 aa14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 FBXL18Q96ME1 805 aa14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 FMNL2Q96PY5 1086 aa14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 ZCCHC17Q9NP64 241 aaKnown RBP14.71□□□□□ -0.05
HDGFL3-204ENST00000563790 ZNF292O60281 2723 aa14.71□□□□□ -0.06
HDGFL3-204ENST00000563790 MYO15AQ9UKN7 3530 aa14.7□□□□□ -0.06
HDGFL3-204ENST00000563790 CCL15-CCL14A0A0B4J2E2 113 aa14.7□□□□□ -0.06
HDGFL3-204ENST00000563790 FMNL1O95466 1100 aaPredicted RBP14.7□□□□□ -0.06
HDGFL3-204ENST00000563790 PRKCZQ05513 592 aa14.7□□□□□ -0.06
HDGFL3-204ENST00000563790 CCL15Q16663 113 aa14.7□□□□□ -0.06
HDGFL3-204ENST00000563790 ERMP1Q7Z2K6 904 aa14.7□□□□□ -0.06
HDGFL3-204ENST00000563790 LBHD1Q9BQE6 289 aaPredicted RBP14.7□□□□□ -0.06
HDGFL3-204ENST00000563790 FLNBO75369 2602 aaKnown RBP14.7□□□□□ -0.06
HDGFL3-204ENST00000563790 UBN2Q6ZU65 1347 aa14.69□□□□□ -0.06
HDGFL3-204ENST00000563790 DMXL1Q9Y485 3027 aa14.69□□□□□ -0.06
HDGFL3-204ENST00000563790 C17orf99Q6UX52 265 aa14.69□□□□□ -0.06
HDGFL3-204ENST00000563790 TMC4Q7Z404 712 aa14.69□□□□□ -0.06
HDGFL3-204ENST00000563790 VPS13AQ96RL7 3174 aa14.68□□□□□ -0.06
HDGFL3-204ENST00000563790 PLXNA1Q9UIW2 1896 aa14.68□□□□□ -0.06
HDGFL3-204ENST00000563790 ADCY3O60266 1144 aa14.68□□□□□ -0.06
HDGFL3-204ENST00000563790 NTSR2O95665 410 aa14.68□□□□□ -0.06
HDGFL3-204ENST00000563790 ITGB8P26012 769 aa14.68□□□□□ -0.06
HDGFL3-204ENST00000563790 SHHQ15465 462 aa14.68□□□□□ -0.06
HDGFL3-204ENST00000563790 KHSRPQ92945 711 aaKnown RBP eCLIP14.68□□□□□ -0.064e-6■□□□□ 8.2
HDGFL3-204ENST00000563790 OPTNQ96CV9 577 aa14.68□□□□□ -0.06
HDGFL3-204ENST00000563790 POLLQ9UGP5 575 aa14.68□□□□□ -0.06
HDGFL3-204ENST00000563790 USP16Q9Y5T5 823 aa14.68□□□□□ -0.06
HDGFL3-204ENST00000563790 PFASO15067 1338 aa14.67□□□□□ -0.06
HDGFL3-204ENST00000563790 GTF2A2P52657 109 aa14.67□□□□□ -0.06
HDGFL3-204ENST00000563790 SUSD4Q5VX71 490 aa14.67□□□□□ -0.06
HDGFL3-204ENST00000563790 ANKRD13AQ8IZ07 590 aa14.67□□□□□ -0.06
HDGFL3-204ENST00000563790 L3MBTL2Q969R5 705 aa14.67□□□□□ -0.06
HDGFL3-204ENST00000563790 EYA3Q99504 573 aa14.67□□□□□ -0.06
HDGFL3-204ENST00000563790 CXXC1Q9P0U4 656 aaPredicted RBP14.67□□□□□ -0.06
HDGFL3-204ENST00000563790 GVINP1Q7Z2Y8 2422 aa14.66□□□□□ -0.06
HDGFL3-204ENST00000563790 C6orf229H3BNL8 230 aa14.66□□□□□ -0.06
HDGFL3-204ENST00000563790 GRAPQ13588 217 aa14.66□□□□□ -0.06
HDGFL3-204ENST00000563790 SULT6B1Q6IMI4 303 aa14.66□□□□□ -0.06
HDGFL3-204ENST00000563790 NBPF10Q6P3W6 841 aaKnown RBP14.66□□□□□ -0.06
HDGFL3-204ENST00000563790 GRAPLQ8TC17 118 aaPredicted RBP14.66□□□□□ -0.06
HDGFL3-204ENST00000563790 PXYLP1Q8TE99 480 aa14.66□□□□□ -0.06
HDGFL3-204ENST00000563790 PI4K2BG5E9Z4 385 aa14.65□□□□□ -0.06
HDGFL3-204ENST00000563790 ELNP15502 786 aa14.65□□□□□ -0.06
HDGFL3-204ENST00000563790 IREB2P48200 963 aaKnown RBP14.65□□□□□ -0.06
HDGFL3-204ENST00000563790 KCTD2Q14681 263 aa14.65□□□□□ -0.06
HDGFL3-204ENST00000563790 SLC10A5Q5PT55 438 aa14.65□□□□□ -0.06
HDGFL3-204ENST00000563790 NSFL1CQ9UNZ2 370 aaKnown RBP14.65□□□□□ -0.06
HDGFL3-204ENST00000563790 PRRC2BQ5JSZ5 2229 aaKnown RBP14.65□□□□□ -0.06
HDGFL3-204ENST00000563790 FRMPD3Q5JV73 1810 aa14.64□□□□□ -0.07
HDGFL3-204ENST00000563790 C9orf50Q5SZB4 431 aa14.64□□□□□ -0.07
HDGFL3-204ENST00000563790 PHOX2BQ99453 314 aa14.64□□□□□ -0.07
HDGFL3-204ENST00000563790 GAS2L1Q99501 681 aaPredicted RBP14.64□□□□□ -0.07
HDGFL3-204ENST00000563790 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDGFL3-204ENST00000563790 IGSF5Q9NSI5 407 aa14.64□□□□□ -0.07
HDGFL3-204ENST00000563790 GABRQQ9UN88 632 aa14.64□□□□□ -0.07
HDGFL3-204ENST00000563790 USP24Q9UPU5 2620 aa14.64□□□□□ -0.07
HDGFL3-204ENST00000563790 ERVV-1B6SEH8 477 aa14.63□□□□□ -0.07
HDGFL3-204ENST00000563790 USP2O75604 605 aaPredicted RBP14.63□□□□□ -0.07
HDGFL3-204ENST00000563790 GPTP24298 496 aa14.63□□□□□ -0.07
HDGFL3-204ENST00000563790 DDX46Q7L014 1031 aaKnown RBP14.63□□□□□ -0.07
HDGFL3-204ENST00000563790 DEFB129Q9H1M3 183 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms