RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 SIK1P57059 783 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 TSPYL6Q8N831 410 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 C8orf58Q8NAV2 365 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 SMARCC1Q92922 1105 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 GLMNQ92990 594 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 CALR3Q96L12 384 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 FMNL2Q96PY5 1086 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 KLF16Q9BXK1 252 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 MYH16Q9H6N6 1097 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 LRRC4BQ9NT99 713 aa6.72□□□□□ -1.33
HERPUD1-207ENST00000563781 PLSCR1O15162 318 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 AVPP01185 164 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 EXOSC9Q06265 439 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 DHX9Q08211 1270 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 ITPK1Q13572 414 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 RNF20Q5VTR2 975 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 DEFB132Q7Z7B7 95 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 CCDC125Q86Z20 511 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 CCDC116Q8IYX3 515 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 TTC5Q8N0Z6 440 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 CAMKK2Q96RR4 588 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 UBR2Q8IWV8 1755 aa6.71□□□□□ -1.34
HERPUD1-207ENST00000563781 CICQ96RK0 1608 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 ERVH48-1M5A8F1 160 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 KCNQ4P56696 695 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 RAB15P59190 212 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 EZH2Q15910 746 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 TXNRD1Q16881 649 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 TSGA10IPQ3SY00 556 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 SLFNL1Q499Z3 407 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 PKDCCQ504Y2 493 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 PPP1R26Q5T8A7 1209 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 DNAJC10Q8IXB1 793 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 LINC00116Q8NCU8 138 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 VIRMAQ69YN4 1812 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 TJP1Q07157 1748 aa6.7□□□□□ -1.34
HERPUD1-207ENST00000563781 ZNF831Q5JPB2 1677 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 PIK3CDO00329 1044 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 VAMP4O75379 141 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 HOXB7P09629 217 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 SNRPA1P09661 255 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 CYP19A1P11511 503 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 BAG6P46379 1132 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 TWISTNBQ3B726 338 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 SLC27A3Q5K4L6 730 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 RNF135Q8IUD6 432 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 CCDC85AQ96PX6 553 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 CCNL1Q9UK58 526 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 USP16Q9Y5T5 823 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 LY75O60449 1722 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 RGPD3A6NKT7 1758 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 RGPD4Q7Z3J3 1758 aa6.69□□□□□ -1.34
HERPUD1-207ENST00000563781 C5P01031 1676 aa6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 ELL2O00472 640 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 TIMP2P16035 220 aa6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 SMCPP49901 116 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 WDR4P57081 412 aaKnown RBP6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 SF3B2Q13435 895 aaKnown RBP6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 ZNF827Q17R98 1081 aa6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 NBPF10Q6P3W6 841 aaKnown RBP6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 INTS5Q6P9B9 1019 aaKnown RBP6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 SND1Q7KZF4 910 aaKnown RBP eCLIP6.68□□□□□ -1.343e-8■■■■□ 26.2
HERPUD1-207ENST00000563781 LRP10Q7Z4F1 713 aa6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 AMIGO3Q86WK7 504 aa6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 NBPF15Q8N660 670 aa6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 UCN2Q96RP3 112 aa6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 TMPRSS4Q9NRS4 437 aa6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 SOS1Q07889 1333 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 CNTNAP4Q9C0A0 1308 aa6.68□□□□□ -1.34
HERPUD1-207ENST00000563781 ZIC2O95409 532 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 A1BGP04217 495 aa6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 CRKLP46109 303 aaKnown RBP6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 PIP4K2AP48426 406 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 PROSER3Q2NL68 480 aa6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 ITPKCQ96DU7 683 aa6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 TEX13AQ9BXU3 409 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 PGPEP1Q9NXJ5 209 aa6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 ZBTB1Q9Y2K1 713 aa6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 PCDHB11Q9Y5F2 797 aa6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 ERBB4Q15303 1308 aa6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 RREB1Q92766 1687 aa6.67□□□□□ -1.34
HERPUD1-207ENST00000563781 TCERG1O14776 1098 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 CAPN5O15484 640 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 EIF5BO60841 1220 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 LILRA1O75019 489 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 STARD3NLO95772 234 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 ANXA1P04083 346 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 CT47B1P0C2W7 299 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 SKIP12755 728 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 EIF2S2P20042 333 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 RARSP54136 660 aaKnown RBP6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 CTC1Q2NKJ3 1217 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 MAP7D1Q3KQU3 841 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 TRAF7Q6Q0C0 670 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 TBC1D9Q6ZT07 1266 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 SMIM5Q71RC9 77 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 CRIPAKQ8N1N5 446 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 PLPP7Q8NBV4 271 aa6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 ZNF784Q8NCA9 323 aaPredicted RBP6.66□□□□□ -1.34
HERPUD1-207ENST00000563781 SSH1Q8WYL5 1049 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms