RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 ZNF589Q86UQ0 364 aaPredicted RBP14.71□□□□□ -0.05
CCDC187-201ENST00000563590 ZNF396Q96N95 335 aaPredicted RBP14.71□□□□□ -0.05
CCDC187-201ENST00000563590 TOP1P11387 765 aaKnown RBP14.71□□□□□ -0.06
CCDC187-201ENST00000563590 CCDC12Q8WUD4 166 aaPredicted RBP14.71□□□□□ -0.06
CCDC187-201ENST00000563590 LCMT1Q9UIC8 334 aa14.71□□□□□ -0.06
CCDC187-201ENST00000563590 FHOD1Q9Y613 1164 aa14.71□□□□□ -0.06
CCDC187-201ENST00000563590 A0A087WZG4 1122 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 E2F4Q16254 413 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 SEC62Q99442 399 aaKnown RBP14.7□□□□□ -0.06
CCDC187-201ENST00000563590 SLC3A2P08195 630 aaKnown RBP14.7□□□□□ -0.06
CCDC187-201ENST00000563590 UBASH3AP57075 661 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 EAF2Q96CJ1 260 aaPredicted RBP14.7□□□□□ -0.06
CCDC187-201ENST00000563590 USP28Q96RU2 1077 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 GOLPH3LQ9H4A5 285 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 BICC1Q9H694 974 aaKnown RBP14.7□□□□□ -0.06
CCDC187-201ENST00000563590 CAVIN2O95810 425 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 CABP4P57796 275 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 DPCR1Q3MIW9 517 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 E4F1Q66K89 784 aaPredicted RBP14.7□□□□□ -0.06
CCDC187-201ENST00000563590 CCDC150Q8NCX0 1101 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 DEF6Q9H4E7 631 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 AXIN2Q9Y2T1 843 aa14.7□□□□□ -0.06
CCDC187-201ENST00000563590 ADCY9O60503 1353 aa14.69□□□□□ -0.06
CCDC187-201ENST00000563590 CTAGE5O15320 804 aa14.69□□□□□ -0.06
CCDC187-201ENST00000563590 RHOXF2BP0C7M4 288 aa14.69□□□□□ -0.06
CCDC187-201ENST00000563590 ETF1P62495 437 aaKnown RBP14.69□□□□□ -0.06
CCDC187-201ENST00000563590 RHOXF2Q9BQY4 288 aa14.69□□□□□ -0.06
CCDC187-201ENST00000563590 SRRTQ9BXP5 876 aaKnown RBP14.69□□□□□ -0.06
CCDC187-201ENST00000563590 MARCKSP29966 332 aaPredicted RBP14.69□□□□□ -0.06
CCDC187-201ENST00000563590 TIMM10P62072 90 aa14.69□□□□□ -0.06
CCDC187-201ENST00000563590 DHX40Q8IX18 779 aaKnown RBP14.69□□□□□ -0.06
CCDC187-201ENST00000563590 DHX37Q8IY37 1157 aaKnown RBP14.69□□□□□ -0.06
CCDC187-201ENST00000563590 LZTFL1Q9NQ48 299 aa14.69□□□□□ -0.06
CCDC187-201ENST00000563590 ZNF594Q96JF6 807 aaPredicted RBP14.69□□□□□ -0.06
CCDC187-201ENST00000563590 NEK1Q96PY6 1258 aa14.69□□□□□ -0.06
CCDC187-201ENST00000563590 RRP15Q9Y3B9 282 aaKnown RBP14.69□□□□□ -0.06
CCDC187-201ENST00000563590 HIP1O00291 1037 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 GOLIM4O00461 696 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 CPLX1O14810 134 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 APOBRQ0VD83 1088 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 SART3Q15020 963 aaKnown RBP14.68□□□□□ -0.06
CCDC187-201ENST00000563590 ORC3Q9UBD5 711 aaPredicted RBP14.68□□□□□ -0.06
CCDC187-201ENST00000563590 DBF4Q9UBU7 674 aaPredicted RBP14.68□□□□□ -0.06
CCDC187-201ENST00000563590 NRXN3Q9Y4C0 1643 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 JAKMIP3Q5VZ66 844 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 WWC2Q6AWC2 1192 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 DESI2Q9BSY9 194 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 FAM53CQ9NYF3 392 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 ADGRL3Q9HAR2 1447 aa14.68□□□□□ -0.06
CCDC187-201ENST00000563590 SASH1O94885 1247 aa14.67□□□□□ -0.06
CCDC187-201ENST00000563590 EIF4A1P60842 406 aaKnown RBP14.67□□□□□ -0.06
CCDC187-201ENST00000563590 PPP2R3AQ06190 1150 aa14.67□□□□□ -0.06
CCDC187-201ENST00000563590 TTC31Q49AM3 519 aaPredicted RBP14.67□□□□□ -0.06
CCDC187-201ENST00000563590 ERC1Q8IUD2 1116 aa14.67□□□□□ -0.06
CCDC187-201ENST00000563590 ARHGAP23Q9P227 1491 aa14.67□□□□□ -0.06
CCDC187-201ENST00000563590 ATP1A3P13637 1013 aa14.67□□□□□ -0.06
CCDC187-201ENST00000563590 MTX1Q13505 466 aa14.67□□□□□ -0.06
CCDC187-201ENST00000563590 CRYBG1Q9Y4K1 1723 aa14.67□□□□□ -0.06
CCDC187-201ENST00000563590 LOC102724159A0A0B4J2E5 919 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 CCP110O43303 1012 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 PWP2Q15269 919 aaKnown RBP14.66□□□□□ -0.06
CCDC187-201ENST00000563590 RRP12Q5JTH9 1297 aaKnown RBP14.66□□□□□ -0.06
CCDC187-201ENST00000563590 MRPS27Q92552 414 aaKnown RBP14.66□□□□□ -0.06
CCDC187-201ENST00000563590 SUCLG2Q96I99 432 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 GIGYF1O75420 1035 aaPredicted RBP14.66□□□□□ -0.06
CCDC187-201ENST00000563590 FAM160A1Q05DH4 1040 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 SLC4A8Q2Y0W8 1093 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 OLFM4Q6UX06 510 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 PES1O00541 588 aaKnown RBP14.66□□□□□ -0.06
CCDC187-201ENST00000563590 ZSCAN12O43309 604 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 FANCCQ00597 558 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 ARMCX5Q6P1M9 558 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 GDAP1L1Q96MZ0 367 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 ZSCAN16Q9H4T2 348 aaPredicted RBP14.66□□□□□ -0.06
CCDC187-201ENST00000563590 PDE11AQ9HCR9 933 aa14.66□□□□□ -0.06
CCDC187-201ENST00000563590 SLIT1O75093 1534 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 PTPDC1A2A3K4 754 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 KIF4BQ2VIQ3 1234 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 ARHGEF25Q86VW2 580 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 ADAM21Q9UKJ8 722 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 ADD1P35611 737 aaKnown RBP14.65□□□□□ -0.06
CCDC187-201ENST00000563590 NBPF11Q86T75 865 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 MICALL1Q8N3F8 863 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 TAF5LO75529 589 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 AXDND1Q5T1B0 1012 aaPredicted RBP14.65□□□□□ -0.06
CCDC187-201ENST00000563590 LMBR1LQ6UX01 489 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 BABAM1Q9NWV8 329 aa14.65□□□□□ -0.06
CCDC187-201ENST00000563590 IQSEC3Q9UPP2 1182 aaPredicted RBP14.65□□□□□ -0.06
CCDC187-201ENST00000563590 MED23Q9ULK4 1368 aa14.64□□□□□ -0.07
CCDC187-201ENST00000563590 TPM1P09493 284 aa14.64□□□□□ -0.07
CCDC187-201ENST00000563590 H2AFXP16104 143 aaPredicted RBP14.64□□□□□ -0.07
CCDC187-201ENST00000563590 RXRAP19793 462 aa14.64□□□□□ -0.07
CCDC187-201ENST00000563590 SCRN1Q12765 414 aa14.64□□□□□ -0.07
CCDC187-201ENST00000563590 ALDH8A1Q9H2A2 487 aaPredicted RBP14.64□□□□□ -0.07
CCDC187-201ENST00000563590 HMG20BQ9P0W2 317 aa14.64□□□□□ -0.07
CCDC187-201ENST00000563590 ADKP55263 362 aaKnown RBP14.64□□□□□ -0.07
CCDC187-201ENST00000563590 AKAP17AQ02040 695 aaKnown RBP14.64□□□□□ -0.07
CCDC187-201ENST00000563590 LRRFIP1Q32MZ4 808 aaKnown RBP14.64□□□□□ -0.07
CCDC187-201ENST00000563590 BRINP3Q76B58 766 aa14.64□□□□□ -0.07
CCDC187-201ENST00000563590 RCOR1Q9UKL0 485 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms