RNA–Protein interactions for RNA: ENST00000563557.1

AC009097.3-201, humanhuman

BASIC

Gene AC009097.3, Length 1,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009097.3-201ENST00000563557 KCNK4Q9NYG8 393 aa8.43□□□□□ -1.06
AC009097.3-201ENST00000563557 METTL12A8MUP2 240 aa8.42□□□□□ -1.06
AC009097.3-201ENST00000563557 SOX1O00570 391 aaPredicted RBP8.42□□□□□ -1.06
AC009097.3-201ENST00000563557 ALX3O95076 343 aa8.42□□□□□ -1.06
AC009097.3-201ENST00000563557 IKBKEQ14164 716 aa8.42□□□□□ -1.06
AC009097.3-201ENST00000563557 DSC3Q14574 896 aa8.42□□□□□ -1.06
AC009097.3-201ENST00000563557 ZSCAN29Q8IWY8 852 aaPredicted RBP8.42□□□□□ -1.06
AC009097.3-201ENST00000563557 SLC7A3Q8WY07 619 aa8.42□□□□□ -1.06
AC009097.3-201ENST00000563557 TCF12Q99081 682 aa8.42□□□□□ -1.06
AC009097.3-201ENST00000563557 A0A096LPE4 126 aa8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 DDX3YO15523 660 aaKnown RBP8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 SPRED3Q2MJR0 410 aa8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 FOXD4L6Q3SYB3 417 aaPredicted RBP8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 HGSNATQ68CP4 663 aa8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 FOXD4L3Q6VB84 417 aaPredicted RBP8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 EHD4Q9H223 541 aa8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 NPHS2Q9NP85 383 aa8.41□□□□□ -1.06
AC009097.3-201ENST00000563557 TREHO43280 583 aa8.4□□□□□ -1.06
AC009097.3-201ENST00000563557 GADD45BO75293 160 aaPredicted RBP8.4□□□□□ -1.06
AC009097.3-201ENST00000563557 GRIA4P48058 902 aa8.4□□□□□ -1.06
AC009097.3-201ENST00000563557 C19orf57Q0VDD7 668 aa8.4□□□□□ -1.06
AC009097.3-201ENST00000563557 DUOXA2Q1HG44 320 aa8.4□□□□□ -1.06
AC009097.3-201ENST00000563557 K7ELQ4 463 aaPredicted RBP8.39□□□□□ -1.07
AC009097.3-201ENST00000563557 EPS8L3Q8TE67 593 aaKnown RBP8.39□□□□□ -1.07
AC009097.3-201ENST00000563557 TP53INP1Q96A56 240 aa8.39□□□□□ -1.07
AC009097.3-201ENST00000563557 SSBP4Q9BWG4 385 aaPredicted RBP8.39□□□□□ -1.07
AC009097.3-201ENST00000563557 ADAM23O75077 832 aa8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 ADAM11O75078 769 aa8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 WISP1O95388 367 aa8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 ESRRAP11474 423 aaPredicted RBP8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 RSPO4Q2I0M5 234 aaPredicted RBP8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 NKAPLQ5M9Q1 402 aa8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 KRTAP1-3Q8IUG1 177 aa8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 ASB16Q96NS5 453 aa8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 SEMA6BQ9H3T3 888 aa8.38□□□□□ -1.07
AC009097.3-201ENST00000563557 NLRP12P59046 1061 aa8.37□□□□□ -1.07
AC009097.3-201ENST00000563557 KIAA1211Q6ZU35 1233 aa8.37□□□□□ -1.07
AC009097.3-201ENST00000563557 ACAD11Q709F0 780 aa8.37□□□□□ -1.07
AC009097.3-201ENST00000563557 AGGF1Q8N302 714 aaeCLIP8.37□□□□□ -1.07
AC009097.3-201ENST00000563557 FOXD4L4Q8WXT5 416 aaPredicted RBP8.37□□□□□ -1.07
AC009097.3-201ENST00000563557 MEGF10Q96KG7 1140 aa8.37□□□□□ -1.07
AC009097.3-201ENST00000563557 NLRP2Q9NX02 1062 aa8.37□□□□□ -1.07
AC009097.3-201ENST00000563557 PPP4R2Q9NY27 417 aa8.37□□□□□ -1.07
AC009097.3-201ENST00000563557 PNMA6FA0A0J9YX94 578 aa8.36□□□□□ -1.07
AC009097.3-201ENST00000563557 PCDH1Q08174 1060 aa8.36□□□□□ -1.07
AC009097.3-201ENST00000563557 ENOX2Q16206 610 aaKnown RBP8.36□□□□□ -1.07
AC009097.3-201ENST00000563557 ZNF423Q2M1K9 1284 aa8.36□□□□□ -1.07
AC009097.3-201ENST00000563557 DZIP1LQ8IYY4 767 aaKnown RBP8.36□□□□□ -1.07
AC009097.3-201ENST00000563557 CLEC4MQ9H2X3 399 aaPredicted RBP8.36□□□□□ -1.07
AC009097.3-201ENST00000563557 SOX17Q9H6I2 414 aaPredicted RBP8.36□□□□□ -1.07
AC009097.3-201ENST00000563557 TMEM238LA0A1B0GVL6 79 aa8.35□□□□□ -1.07
AC009097.3-201ENST00000563557 GLB1P16278 677 aa8.35□□□□□ -1.07
AC009097.3-201ENST00000563557 GSTM4Q03013 218 aa8.35□□□□□ -1.07
AC009097.3-201ENST00000563557 UBASH3BQ8TF42 649 aa8.35□□□□□ -1.07
AC009097.3-201ENST00000563557 TRAK1Q9UPV9 953 aa8.35□□□□□ -1.07
AC009097.3-201ENST00000563557 EIF4EBP3O60516 100 aaPredicted RBP8.34□□□□□ -1.07
AC009097.3-201ENST00000563557 H2AFB1P0C5Y9 115 aa8.34□□□□□ -1.07
AC009097.3-201ENST00000563557 H2AFB2P0C5Z0 115 aa8.34□□□□□ -1.07
AC009097.3-201ENST00000563557 ITPKAP23677 461 aa8.34□□□□□ -1.07
AC009097.3-201ENST00000563557 MAPK8P45983 427 aa8.34□□□□□ -1.07
AC009097.3-201ENST00000563557 GRM2Q14416 872 aa8.34□□□□□ -1.07
AC009097.3-201ENST00000563557 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.34□□□□□ -1.07
AC009097.3-201ENST00000563557 Q6ZS46 218 aa8.34□□□□□ -1.07
AC009097.3-201ENST00000563557 SND1Q7KZF4 910 aaKnown RBP eCLIP8.34□□□□□ -1.07
AC009097.3-201ENST00000563557 PTPN12Q05209 780 aaKnown RBP8.33□□□□□ -1.08
AC009097.3-201ENST00000563557 PRPF40BQ6NWY9 871 aaKnown RBP8.33□□□□□ -1.08
AC009097.3-201ENST00000563557 PI16Q6UXB8 463 aa8.33□□□□□ -1.08
AC009097.3-201ENST00000563557 GLIS3Q8NEA6 775 aa8.33□□□□□ -1.08
AC009097.3-201ENST00000563557 PSMG3-AS1Q96PY0 264 aa8.33□□□□□ -1.08
AC009097.3-201ENST00000563557 UBL7Q96S82 380 aaPredicted RBP8.33□□□□□ -1.08
AC009097.3-201ENST00000563557 CEP41Q9BYV8 373 aa8.33□□□□□ -1.08
AC009097.3-201ENST00000563557 ABCB6Q9NP58 842 aa8.33□□□□□ -1.08
AC009097.3-201ENST00000563557 DYRK3O43781 588 aa8.32□□□□□ -1.08
AC009097.3-201ENST00000563557 FMR1Q06787 632 aaKnown RBP eCLIP8.32□□□□□ -1.08
AC009097.3-201ENST00000563557 RUSC1Q9BVN2 902 aa8.32□□□□□ -1.08
AC009097.3-201ENST00000563557 BCO2Q9BYV7 579 aa8.32□□□□□ -1.08
AC009097.3-201ENST00000563557 ZNF576Q9H609 170 aa8.32□□□□□ -1.08
AC009097.3-201ENST00000563557 MEGF11A6BM72 1044 aa8.31□□□□□ -1.08
AC009097.3-201ENST00000563557 DDX54Q8TDD1 881 aaKnown RBP8.31□□□□□ -1.08
AC009097.3-201ENST00000563557 USP26Q9BXU7 913 aa8.31□□□□□ -1.08
AC009097.3-201ENST00000563557 RNF208Q9H0X6 261 aa8.31□□□□□ -1.08
AC009097.3-201ENST00000563557 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
AC009097.3-201ENST00000563557 LOC100289279A0A1B0GTE1 492 aa8.3□□□□□ -1.08
AC009097.3-201ENST00000563557 B3GALT4O96024 378 aa8.3□□□□□ -1.08
AC009097.3-201ENST00000563557 FCGRTP55899 365 aa8.3□□□□□ -1.08
AC009097.3-201ENST00000563557 RPS26P11Q5JNZ5 115 aaPredicted RBP8.3□□□□□ -1.08
AC009097.3-201ENST00000563557 ALG1LQ6GMV1 187 aa8.3□□□□□ -1.08
AC009097.3-201ENST00000563557 NXPE4Q6UWF7 544 aa8.3□□□□□ -1.08
AC009097.3-201ENST00000563557 SETDB2Q96T68 719 aa8.3□□□□□ -1.08
AC009097.3-201ENST00000563557 ZFYVE1Q9HBF4 777 aa8.3□□□□□ -1.08
AC009097.3-201ENST00000563557 CYP11A1P05108 521 aa8.29□□□□□ -1.08
AC009097.3-201ENST00000563557 EXOSC6Q5RKV6 272 aaKnown RBP8.29□□□□□ -1.08
AC009097.3-201ENST00000563557 NUTM2GQ5VZR2 741 aa8.29□□□□□ -1.08
AC009097.3-201ENST00000563557 DTHD1Q6ZMT9 781 aa8.29□□□□□ -1.08
AC009097.3-201ENST00000563557 FBF1Q8TES7 1133 aa8.29□□□□□ -1.08
AC009097.3-201ENST00000563557 GZF1Q9H116 711 aaPredicted RBP8.29□□□□□ -1.08
AC009097.3-201ENST00000563557 SART1O43290 800 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms