RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 HVCN1Q96D96 273 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 MAP3K14Q99558 947 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 YY1AP1Q9H869 796 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 PCDHGB3Q9Y5G1 929 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 MAGED1Q9Y5V3 778 aaPredicted RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 GTPBP10A4D1E9 387 aaKnown RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 PLCG2P16885 1265 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 STT3AP46977 705 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 IRX5P78411 483 aaPredicted RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 SFSWAPQ12872 951 aaKnown RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 DPYDQ12882 1025 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 PAK2Q13177 524 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 TSHZ3Q63HK5 1081 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 MKNK1Q9BUB5 465 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 TMEM106CQ9BVX2 250 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 CYLDQ9NQC7 956 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 MKS1Q9NXB0 559 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 CDV3Q9UKY7 258 aaKnown RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 SMTNL1A8MU46 457 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 TRPC1P48995 793 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 FOXK1P85037 733 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 PUM3Q15397 648 aaKnown RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 TAF3Q5VWG9 929 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 UNC5DQ6UXZ4 953 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 PNMA8AQ86V59 439 aaPredicted RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 C2orf49Q9BVC5 232 aaPredicted RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 DHX36Q9H2U1 1008 aaKnown RBP5.68□□□□□ -1.5
SMG1-207ENST00000563235 GINM1Q9NU53 330 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 SUN2Q9UH99 717 aa5.68□□□□□ -1.5
SMG1-207ENST00000563235 DNMBPQ6XZF7 1577 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 SHROOM2Q13796 1616 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 NBPF7P0C2Y1 421 aaPredicted RBP5.67□□□□□ -1.5
SMG1-207ENST00000563235 INHBEP58166 350 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 FAM133BQ5BKY9 247 aaKnown RBP5.67□□□□□ -1.5
SMG1-207ENST00000563235 CCDC73Q6ZRK6 1079 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 ANKS3Q6ZW76 656 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 VPS37DQ86XT2 251 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 ARL6IP6Q8N6S5 226 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 HNRNPLLQ8WVV9 542 aaKnown RBP5.67□□□□□ -1.5
SMG1-207ENST00000563235 ZNF594Q96JF6 807 aaPredicted RBP5.67□□□□□ -1.5
SMG1-207ENST00000563235 ASPSCR1Q9BZE9 553 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 RABL2AQ9UBK7 228 aaPredicted RBP5.67□□□□□ -1.5
SMG1-207ENST00000563235 USP25Q9UHP3 1055 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 MORC2Q9Y6X9 1032 aaPredicted RBP5.67□□□□□ -1.5
SMG1-207ENST00000563235 MPHOSPH10O00566 681 aaKnown RBP5.67□□□□□ -1.5
SMG1-207ENST00000563235 IL4RP24394 825 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 RENBPP51606 427 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 CLDN10P78369 228 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 C11orf74Q86VG3 221 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 DZIP3Q86Y13 1208 aaKnown RBP5.67□□□□□ -1.5
SMG1-207ENST00000563235 ANKMY2Q8IV38 441 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 IQCF2Q8IXL9 164 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 FEZ1Q99689 392 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 SMAD5Q99717 465 aaKnown RBP5.67□□□□□ -1.5
SMG1-207ENST00000563235 CNNM2Q9H8M5 875 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 COMMD8Q9NX08 183 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 DCAF16Q9NXF7 216 aa5.67□□□□□ -1.5
SMG1-207ENST00000563235 C11orf95C9JLR9 678 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 GOLGA6L22H0YM25 854 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 SKILP12757 684 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 GYS1P13807 737 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 PPP2R5CQ13362 524 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 FXNQ16595 210 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 MILR1Q7Z6M3 343 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 SYMPKQ92797 1274 aaKnown RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 OSBPL5Q9H0X9 879 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 SUDS3Q9H7L9 328 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 CENPJQ9HC77 1338 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 RASSF10A6NK89 507 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 NUTM2BA6NNL0 878 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 NUTM2EB1AL46 878 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 ELL2O00472 640 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 KLF4O43474 513 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 SKIP12755 728 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 PSMA3P25788 255 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 MZF1P28698 734 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 SOX11P35716 441 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 KCNH2Q12809 1159 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 GRM1Q13255 1194 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 SLC10A5Q5PT55 438 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 NUTM2DQ5VT03 806 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 MMS22LQ6ZRQ5 1243 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 NUTM2AQ8IVF1 878 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 IFNL2Q8IZJ0 200 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 ARL10Q8N8L6 244 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 FAM210AQ96ND0 272 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 IWS1Q96ST2 819 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 CCDC94Q9BW85 323 aaPredicted RBP5.66□□□□□ -1.5
SMG1-207ENST00000563235 OCEL1Q9H607 264 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 TMEM260Q9NX78 707 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 TSKSQ9UJT2 592 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 MROH2BQ7Z745 1585 aa5.66□□□□□ -1.5
SMG1-207ENST00000563235 SNPHO15079 494 aa5.65□□□□□ -1.5
SMG1-207ENST00000563235 RAB33AQ14088 237 aa5.65□□□□□ -1.5
SMG1-207ENST00000563235 CDCA2Q69YH5 1023 aaPredicted RBP5.65□□□□□ -1.5
SMG1-207ENST00000563235 CDC37L1Q7L3B6 337 aa5.65□□□□□ -1.5
SMG1-207ENST00000563235 KRT26Q7Z3Y9 468 aa5.65□□□□□ -1.5
SMG1-207ENST00000563235 KCT2Q8NC54 265 aa5.65□□□□□ -1.5
SMG1-207ENST00000563235 GIMAP8Q8ND71 665 aaPredicted RBP5.65□□□□□ -1.5
SMG1-207ENST00000563235 PHC3Q8NDX5 983 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms