RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 CWC27Q6UX04 472 aaKnown RBP16.81■□□□□ 0.28
CLK3-209ENST00000562670 DPP8Q6V1X1 898 aaPredicted RBP16.81■□□□□ 0.28
CLK3-209ENST00000562670 SLC51AQ86UW1 340 aa16.81■□□□□ 0.28
CLK3-209ENST00000562670 TDRD7Q8NHU6 1098 aaKnown RBP16.81■□□□□ 0.28
CLK3-209ENST00000562670 EYA3Q99504 573 aa16.81■□□□□ 0.28
CLK3-209ENST00000562670 USP26Q9BXU7 913 aa16.81■□□□□ 0.28
CLK3-209ENST00000562670 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
CLK3-209ENST00000562670 A0A0D9SFI3 127 aa16.8■□□□□ 0.28
CLK3-209ENST00000562670 PSDA5PKW4 1024 aaPredicted RBP16.8■□□□□ 0.28
CLK3-209ENST00000562670 DPEP1P16444 411 aa16.8■□□□□ 0.28
CLK3-209ENST00000562670 UBE3CQ15386 1083 aa16.8■□□□□ 0.28
CLK3-209ENST00000562670 TXNRD3Q86VQ6 643 aa16.8■□□□□ 0.28
CLK3-209ENST00000562670 IL17RAQ96F46 866 aa16.8■□□□□ 0.28
CLK3-209ENST00000562670 FAM227BQ96M60 508 aa16.8■□□□□ 0.28
CLK3-209ENST00000562670 IL25Q9H293 177 aa16.8■□□□□ 0.28
CLK3-209ENST00000562670 ADD2P35612 726 aa16.79■□□□□ 0.28
CLK3-209ENST00000562670 MAP3K12Q12852 859 aa16.79■□□□□ 0.28
CLK3-209ENST00000562670 MCMDC2Q4G0Z9 681 aa16.79■□□□□ 0.28
CLK3-209ENST00000562670 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
CLK3-209ENST00000562670 SUPT20HQ8NEM7 779 aa16.79■□□□□ 0.28
CLK3-209ENST00000562670 APPBP2Q92624 585 aa16.79■□□□□ 0.28
CLK3-209ENST00000562670 COA1Q9GZY4 146 aa16.79■□□□□ 0.28
CLK3-209ENST00000562670 PIH1D3Q9NQM4 214 aaKnown RBP16.79■□□□□ 0.28
CLK3-209ENST00000562670 C6orf229H3BNL8 230 aa16.78■□□□□ 0.28
CLK3-209ENST00000562670 WASHC4Q2M389 1173 aa16.78■□□□□ 0.28
CLK3-209ENST00000562670 CCDC93Q567U6 631 aa16.78■□□□□ 0.28
CLK3-209ENST00000562670 WDR66Q8TBY9 1149 aa16.78■□□□□ 0.28
CLK3-209ENST00000562670 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
CLK3-209ENST00000562670 SPON1Q9HCB6 807 aa16.78■□□□□ 0.28
CLK3-209ENST00000562670 CD209Q9NNX6 404 aa16.78■□□□□ 0.28
CLK3-209ENST00000562670 ANO2Q9NQ90 1003 aa16.78■□□□□ 0.28
CLK3-209ENST00000562670 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
CLK3-209ENST00000562670 PDE6AP16499 860 aa16.77■□□□□ 0.28
CLK3-209ENST00000562670 KIAA1211Q6ZU35 1233 aa16.77■□□□□ 0.28
CLK3-209ENST00000562670 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.28
CLK3-209ENST00000562670 PSMD1Q99460 953 aa16.77■□□□□ 0.28
CLK3-209ENST00000562670 PIM2Q9P1W9 311 aa16.77■□□□□ 0.28
CLK3-209ENST00000562670 MAST3O60307 1309 aa16.76■□□□□ 0.27
CLK3-209ENST00000562670 FAM205AQ6ZU69 1335 aa16.76■□□□□ 0.27
CLK3-209ENST00000562670 MYO5AQ9Y4I1 1855 aaKnown RBP16.76■□□□□ 0.27
CLK3-209ENST00000562670 A0A0G2JLW4 131 aa16.76■□□□□ 0.27
CLK3-209ENST00000562670 TCRBV5S4A2TA0A5A2 114 aa16.76■□□□□ 0.27
CLK3-209ENST00000562670 IDH1O75874 414 aaKnown RBP16.76■□□□□ 0.27
CLK3-209ENST00000562670 MCCP23508 829 aa16.76■□□□□ 0.27
CLK3-209ENST00000562670 ANP32AP39687 249 aaKnown RBP16.76■□□□□ 0.27
CLK3-209ENST00000562670 ANAPC15P60006 121 aa16.76■□□□□ 0.27
CLK3-209ENST00000562670 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
CLK3-209ENST00000562670 ZC3H12CQ9C0D7 883 aaKnown RBP16.76■□□□□ 0.27
CLK3-209ENST00000562670 VPS33BQ9H267 617 aa16.76■□□□□ 0.27
CLK3-209ENST00000562670 FRAT2O75474 233 aaPredicted RBP16.75■□□□□ 0.27
CLK3-209ENST00000562670 SLC9C2Q5TAH2 1124 aa16.75■□□□□ 0.27
CLK3-209ENST00000562670 SPTY2D1Q68D10 685 aaPredicted RBP16.75■□□□□ 0.27
CLK3-209ENST00000562670 OLFM4Q6UX06 510 aa16.75■□□□□ 0.27
CLK3-209ENST00000562670 ZNF589Q86UQ0 364 aaPredicted RBP16.75■□□□□ 0.27
CLK3-209ENST00000562670 TBC1D22AQ8WUA7 517 aa16.75■□□□□ 0.27
CLK3-209ENST00000562670 ARFGEF1Q9Y6D6 1849 aa16.75■□□□□ 0.27
CLK3-209ENST00000562670 KIAA2012Q0VF49 1180 aa16.74■□□□□ 0.27
CLK3-209ENST00000562670 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
CLK3-209ENST00000562670 OSBP2Q969R2 916 aa16.74■□□□□ 0.27
CLK3-209ENST00000562670 GPR101Q96P66 508 aaPredicted RBP16.74■□□□□ 0.27
CLK3-209ENST00000562670 DSCC1Q9BVC3 393 aa16.74■□□□□ 0.27
CLK3-209ENST00000562670 WWC3Q9ULE0 1092 aa16.74■□□□□ 0.27
CLK3-209ENST00000562670 IQSEC3Q9UPP2 1182 aaPredicted RBP16.74■□□□□ 0.27
CLK3-209ENST00000562670 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
CLK3-209ENST00000562670 ZNF532Q9HCE3 1301 aa16.73■□□□□ 0.27
CLK3-209ENST00000562670 HSPA4P34932 840 aa16.73■□□□□ 0.27
CLK3-209ENST00000562670 DALRD3Q5D0E6 543 aaKnown RBP16.73■□□□□ 0.27
CLK3-209ENST00000562670 PODNQ7Z5L7 613 aa16.73■□□□□ 0.27
CLK3-209ENST00000562670 KCNB2Q92953 911 aa16.73■□□□□ 0.27
CLK3-209ENST00000562670 LRP2BPQ9P2M1 347 aa16.73■□□□□ 0.27
CLK3-209ENST00000562670 FER1L6Q2WGJ9 1857 aa16.73■□□□□ 0.27
CLK3-209ENST00000562670 CCDC88AQ3V6T2 1871 aa16.73■□□□□ 0.27
CLK3-209ENST00000562670 ZNF646O15015 1829 aaPredicted RBP16.73■□□□□ 0.27
CLK3-209ENST00000562670 C21orf2O43822 256 aa16.72■□□□□ 0.27
CLK3-209ENST00000562670 ERICH6Q7L0X2 663 aa16.72■□□□□ 0.27
CLK3-209ENST00000562670 PSME4Q14997 1843 aa16.72■□□□□ 0.27
CLK3-209ENST00000562670 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
CLK3-209ENST00000562670 LTBP3Q9NS15 1303 aa16.71■□□□□ 0.27
CLK3-209ENST00000562670 M0R2C6 588 aa16.71■□□□□ 0.27
CLK3-209ENST00000562670 CHGBP05060 677 aa16.71■□□□□ 0.27
CLK3-209ENST00000562670 FKBP1AP62942 108 aaKnown RBP16.71■□□□□ 0.27
CLK3-209ENST00000562670 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
CLK3-209ENST00000562670 MAGEB6Q8N7X4 407 aa16.71■□□□□ 0.27
CLK3-209ENST00000562670 NSUN4Q96CB9 384 aaKnown RBP16.71■□□□□ 0.27
CLK3-209ENST00000562670 SEC62Q99442 399 aaKnown RBP16.71■□□□□ 0.27
CLK3-209ENST00000562670 KIF2CQ99661 725 aa16.71■□□□□ 0.27
CLK3-209ENST00000562670 ABCF2Q9UG63 623 aa16.71■□□□□ 0.27
CLK3-209ENST00000562670 RPAP1Q9BWH6 1393 aaPredicted RBP16.71■□□□□ 0.27
CLK3-209ENST00000562670 GPAA1O43292 621 aa16.7■□□□□ 0.26
CLK3-209ENST00000562670 PTH1RQ03431 593 aa16.7■□□□□ 0.26
CLK3-209ENST00000562670 CERS3Q8IU89 383 aa16.7■□□□□ 0.26
CLK3-209ENST00000562670 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
CLK3-209ENST00000562670 PUS7LQ9H0K6 701 aaKnown RBP16.7■□□□□ 0.26
CLK3-209ENST00000562670 RAI14Q9P0K7 980 aa16.7■□□□□ 0.26
CLK3-209ENST00000562670 U3KPZ7 1027 aaPredicted RBP16.7■□□□□ 0.26
CLK3-209ENST00000562670 CHD4Q14839 1912 aa16.69■□□□□ 0.26
CLK3-209ENST00000562670 LDHBP07195 334 aaKnown RBP16.69■□□□□ 0.26
CLK3-209ENST00000562670 GNAT2P19087 354 aa16.69■□□□□ 0.26
CLK3-209ENST00000562670 GSTO1P78417 241 aa16.69■□□□□ 0.26
CLK3-209ENST00000562670 NECTIN1Q15223 517 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms