RNA–Protein interactions for RNA: ENST00000562576.5

CNEP1R1-204, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 5 BASIC

Gene CNEP1R1, Length 656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-204ENST00000562576 IGF2BP3O00425 579 aaKnown RBP eCLIP9.21□□□□□ -0.94
CNEP1R1-204ENST00000562576 U2SURPO15042 1029 aaKnown RBP9.21□□□□□ -0.94
CNEP1R1-204ENST00000562576 ECE2O60344 883 aa9.21□□□□□ -0.94
CNEP1R1-204ENST00000562576 BBOX1O75936 387 aa9.21□□□□□ -0.94
CNEP1R1-204ENST00000562576 WASHC4Q2M389 1173 aa9.21□□□□□ -0.94
CNEP1R1-204ENST00000562576 MXD3Q9BW11 206 aa9.21□□□□□ -0.94
CNEP1R1-204ENST00000562576 PRO3102Q9H379 93 aa9.21□□□□□ -0.94
CNEP1R1-204ENST00000562576 SCN9AQ15858 1988 aa9.21□□□□□ -0.94
CNEP1R1-204ENST00000562576 VIL1P09327 827 aaKnown RBP9.2□□□□□ -0.94
CNEP1R1-204ENST00000562576 TTLL12Q14166 644 aaPredicted RBP9.2□□□□□ -0.94
CNEP1R1-204ENST00000562576 NBPF9Q3BBW0 867 aa9.2□□□□□ -0.94
CNEP1R1-204ENST00000562576 AMER1Q5JTC6 1135 aaPredicted RBP9.2□□□□□ -0.94
CNEP1R1-204ENST00000562576 CFHR5Q9BXR6 569 aa9.2□□□□□ -0.94
CNEP1R1-204ENST00000562576 IRX2Q9BZI1 471 aaPredicted RBP9.2□□□□□ -0.94
CNEP1R1-204ENST00000562576 NSFL1CQ9UNZ2 370 aaKnown RBP9.2□□□□□ -0.94
CNEP1R1-204ENST00000562576 RBBP6Q7Z6E9 1792 aaKnown RBP9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 SOWAHBA6NEL2 793 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 C6orf229H3BNL8 230 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 ANXA1P04083 346 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 COL9A1P20849 921 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 ZNF280AP59817 542 aaPredicted RBP9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 CAMK2BQ13554 666 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 PROX2Q3B8N5 592 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 SPRYD7Q5W111 196 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 Q7L0L9 218 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 GAS2L2Q8NHY3 880 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 CELF1Q92879 486 aaKnown RBP9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 ZNF333Q96JL9 665 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 TMX4Q9H1E5 349 aaPredicted RBP9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 LAMB2P55268 1798 aa9.19□□□□□ -0.94
CNEP1R1-204ENST00000562576 LAMA3Q16787 3333 aa9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 GRAPQ13588 217 aa9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 GRAPLQ8TC17 118 aaPredicted RBP9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 SH3TC2Q8TF17 1288 aa9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 DPF3Q92784 378 aa9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 CLMNQ96JQ2 1002 aa9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 GMLQ99445 158 aa9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 PTPN18Q99952 460 aa9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 UTP14AQ9BVJ6 771 aaKnown RBP9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 PTCH2Q9Y6C5 1203 aa9.18□□□□□ -0.94
CNEP1R1-204ENST00000562576 PITPNM2Q9BZ72 1349 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 RPS12P25398 132 aaKnown RBP9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 PRKAR2BP31323 418 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 GJA5P36382 358 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 FKBP1BP68106 108 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 CRHR2Q13324 411 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 PROSER3Q2NL68 480 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 C6orf132Q5T0Z8 1188 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 GIGYF2Q6Y7W6 1299 aaKnown RBP9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 KIF6Q6ZMV9 814 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 TBC1D16Q8TBP0 767 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 SHISA4Q96DD7 197 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 EFCC1Q9HA90 598 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 MYOZ2Q9NPC6 264 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 KIAA1468Q9P260 1216 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 RAPGEFL1Q9UHV5 662 aa9.17□□□□□ -0.94
CNEP1R1-204ENST00000562576 COL3A1P02461 1466 aaPredicted RBP9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 ZNF609O15014 1411 aa9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 IBTKQ9P2D0 1353 aaPredicted RBP9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 SLC4A8Q2Y0W8 1093 aa9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 CC2D1BQ5T0F9 858 aaKnown RBP9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 LDLRAD1Q5T700 205 aa9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 DDX46Q7L014 1031 aaKnown RBP9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 LRP10Q7Z4F1 713 aa9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 PPP1R42Q7Z4L9 355 aa9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 ZFRQ96KR1 1074 aaKnown RBP9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 SPTBN5Q9NRC6 3674 aaKnown RBP9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 KDM3BQ7LBC6 1761 aa9.16□□□□□ -0.94
CNEP1R1-204ENST00000562576 SREBF2Q12772 1141 aa9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 PDIA6Q15084 440 aa9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 MTFR1Q15390 333 aa9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 NLRP10Q86W26 655 aa9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 ARHGAP39Q9C0H5 1083 aa9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 RSPH6AQ9H0K4 717 aa9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 STAP2Q9UGK3 403 aa9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 ANGEL1Q9UNK9 670 aaKnown RBP9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 KNSTRNQ9Y448 316 aa9.15□□□□□ -0.94
CNEP1R1-204ENST00000562576 ZSWIM8A7E2V4 1837 aa9.15□□□□□ -0.95
CNEP1R1-204ENST00000562576 SASH1O94885 1247 aa9.14□□□□□ -0.95
CNEP1R1-204ENST00000562576 USP17L8P0C7I0 530 aa9.14□□□□□ -0.95
CNEP1R1-204ENST00000562576 HSPA5P11021 654 aaKnown RBP9.14□□□□□ -0.95
CNEP1R1-204ENST00000562576 ERO1AQ96HE7 468 aa9.14□□□□□ -0.95
CNEP1R1-204ENST00000562576 VCANP13611 3396 aa9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 BCAMP50895 628 aa9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 EIF4A1P60842 406 aaKnown RBP9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 SP3Q02447 781 aa9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 TAF7Q15545 349 aaPredicted RBP9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 SLC9C1Q4G0N8 1177 aa9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 PARP10Q53GL7 1025 aa9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 WNK4Q96J92 1243 aa9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 TRMT112Q9UI30 125 aaKnown RBP9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 PCDHAC2Q9Y5I4 1007 aa9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 LRRC37AA6NMS7 1700 aa9.13□□□□□ -0.95
CNEP1R1-204ENST00000562576 ANKRD36CQ5JPF3 1778 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 AOX1Q06278 1338 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 WNT10BO00744 389 aa9.12□□□□□ -0.95
CNEP1R1-204ENST00000562576 DPYSL4O14531 572 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms