RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 ADGRA2Q96PE1 1338 aa12.84□□□□□ -0.35
AC010542.3-202ENST00000561728 MTHFSDQ2M296 383 aaKnown RBP12.83□□□□□ -0.36
AC010542.3-202ENST00000561728 KIF6Q6ZMV9 814 aa12.83□□□□□ -0.36
AC010542.3-202ENST00000561728 ANKRD13AQ8IZ07 590 aa12.83□□□□□ -0.36
AC010542.3-202ENST00000561728 NECAB3Q96P71 396 aaPredicted RBP12.83□□□□□ -0.36
AC010542.3-202ENST00000561728 C11orf49Q9H6J7 331 aa12.83□□□□□ -0.36
AC010542.3-202ENST00000561728 COL1A1P02452 1464 aaPredicted RBP12.83□□□□□ -0.36
AC010542.3-202ENST00000561728 SASH1O94885 1247 aa12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 INHAP05111 366 aa12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 SNRPA1P09661 255 aaKnown RBP12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 CTGFP29279 349 aa12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 PRKCZQ05513 592 aa12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 ELP3Q9H9T3 547 aa12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 PAK6Q9NQU5 681 aaPredicted RBP12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 NUP98P52948 1817 aa12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 MAP3K15Q6ZN16 1313 aa12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 LRRC37AA6NMS7 1700 aa12.82□□□□□ -0.36
AC010542.3-202ENST00000561728 CACNA1BQ00975 2339 aa12.81□□□□□ -0.36
AC010542.3-202ENST00000561728 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
AC010542.3-202ENST00000561728 KCNQ3O43525 872 aa12.81□□□□□ -0.36
AC010542.3-202ENST00000561728 DSG3P32926 999 aa12.81□□□□□ -0.36
AC010542.3-202ENST00000561728 GPSM2P81274 684 aa12.81□□□□□ -0.36
AC010542.3-202ENST00000561728 SLC10A5Q5PT55 438 aa12.81□□□□□ -0.36
AC010542.3-202ENST00000561728 DEFB129Q9H1M3 183 aa12.81□□□□□ -0.36
AC010542.3-202ENST00000561728 USP17L3A6NCW0 530 aa12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 USP17L4A6NCW7 530 aa12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 BTBD11A6QL63 1104 aa12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 ADCY3O60266 1144 aa12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 GPR37L1O60883 481 aa12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 SMAD3P84022 425 aaKnown RBP12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 NHLH1Q02575 133 aa12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 SUPT20HL1Q3ZLR7 823 aa12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 PARP10Q53GL7 1025 aa12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 USP17L1Q7RTZ2 530 aa12.8□□□□□ -0.36
AC010542.3-202ENST00000561728 TBC1D16Q8TBP0 767 aa12.79□□□□□ -0.36
AC010542.3-202ENST00000561728 UTP14AQ9BVJ6 771 aaKnown RBP12.79□□□□□ -0.36
AC010542.3-202ENST00000561728 ZCCHC17Q9NP64 241 aaKnown RBP12.79□□□□□ -0.36
AC010542.3-202ENST00000561728 FAM86C2PA6NEL3 165 aa12.78□□□□□ -0.36
AC010542.3-202ENST00000561728 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
AC010542.3-202ENST00000561728 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
AC010542.3-202ENST00000561728 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
AC010542.3-202ENST00000561728 CPA4Q9UI42 421 aa12.78□□□□□ -0.36
AC010542.3-202ENST00000561728 ANKRD36CQ5JPF3 1778 aa12.78□□□□□ -0.36
AC010542.3-202ENST00000561728 TCF20Q9UGU0 1960 aaKnown RBP12.78□□□□□ -0.36
AC010542.3-202ENST00000561728 SMIM22K7EJ46 135 aa12.77□□□□□ -0.37
AC010542.3-202ENST00000561728 ABCB7O75027 752 aa12.77□□□□□ -0.37
AC010542.3-202ENST00000561728 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
AC010542.3-202ENST00000561728 ELNP15502 786 aa12.77□□□□□ -0.37
AC010542.3-202ENST00000561728 FCGRTP55899 365 aa12.77□□□□□ -0.37
AC010542.3-202ENST00000561728 PPP2R3BQ9Y5P8 575 aa12.77□□□□□ -0.37
AC010542.3-202ENST00000561728 PSME4Q14997 1843 aa12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 USP2O75604 605 aaPredicted RBP12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 HMOX1P09601 288 aa12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 GRIN2CQ14957 1233 aa12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 PODNQ7Z5L7 613 aa12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 IL17REQ8NFR9 667 aa12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 PXYLP1Q8TE99 480 aa12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 SIPA1L3O60292 1781 aaPredicted RBP12.76□□□□□ -0.37
AC010542.3-202ENST00000561728 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
AC010542.3-202ENST00000561728 ST18O60284 1047 aa12.75□□□□□ -0.37
AC010542.3-202ENST00000561728 UFL1O94874 794 aa12.75□□□□□ -0.37
AC010542.3-202ENST00000561728 CETPP11597 493 aa12.75□□□□□ -0.37
AC010542.3-202ENST00000561728 IL13P35225 146 aa12.75□□□□□ -0.37
AC010542.3-202ENST00000561728 LAMB2P55268 1798 aa12.75□□□□□ -0.37
AC010542.3-202ENST00000561728 DDX60LQ5H9U9 1706 aaKnown RBP12.75□□□□□ -0.37
AC010542.3-202ENST00000561728 GAS2L1Q99501 681 aaPredicted RBP12.75□□□□□ -0.37
AC010542.3-202ENST00000561728 GABRQQ9UN88 632 aa12.75□□□□□ -0.37
AC010542.3-202ENST00000561728 GNAT3A8MTJ3 354 aa12.74□□□□□ -0.37
AC010542.3-202ENST00000561728 MMP14P50281 582 aa12.74□□□□□ -0.37
AC010542.3-202ENST00000561728 SHHQ15465 462 aa12.74□□□□□ -0.37
AC010542.3-202ENST00000561728 POTEEQ6S8J3 1075 aa12.74□□□□□ -0.37
AC010542.3-202ENST00000561728 TTLL7Q6ZT98 887 aa12.74□□□□□ -0.37
AC010542.3-202ENST00000561728 ZBTB38Q8NAP3 1195 aaPredicted RBP12.74□□□□□ -0.37
AC010542.3-202ENST00000561728 C11orf16Q9NQ32 467 aa12.74□□□□□ -0.37
AC010542.3-202ENST00000561728 MYO3BQ8WXR4 1341 aa12.73□□□□□ -0.37
AC010542.3-202ENST00000561728 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
AC010542.3-202ENST00000561728 AKNAD1Q5T1N1 836 aa12.73□□□□□ -0.37
AC010542.3-202ENST00000561728 GIGYF2Q6Y7W6 1299 aaKnown RBP12.73□□□□□ -0.37
AC010542.3-202ENST00000561728 FBXW7Q969H0 707 aa12.73□□□□□ -0.37
AC010542.3-202ENST00000561728 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
AC010542.3-202ENST00000561728 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
AC010542.3-202ENST00000561728 BAHCC1Q9P281 2608 aa12.73□□□□□ -0.37
AC010542.3-202ENST00000561728 PFASO15067 1338 aa12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 FLT3LGP49771 235 aa12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 PDE3AQ14432 1141 aa12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 NBPF12Q5TAG4 269 aaPredicted RBP12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 CELF1Q92879 486 aaKnown RBP12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 CFAP54Q96N23 3096 aa12.72□□□□□ -0.37
AC010542.3-202ENST00000561728 OTOFQ9HC10 1997 aa12.71□□□□□ -0.37
AC010542.3-202ENST00000561728 BMP1P13497 986 aa12.71□□□□□ -0.37
AC010542.3-202ENST00000561728 NEUROD1Q13562 356 aa12.71□□□□□ -0.37
AC010542.3-202ENST00000561728 CCDC85BQ15834 202 aaPredicted RBP12.71□□□□□ -0.37
AC010542.3-202ENST00000561728 C9orf50Q5SZB4 431 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms