RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-215ENST00000561367 PDE8BO95263 885 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 ATP2B4P23634 1241 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 IRX6P78412 446 aaPredicted RBP12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 CHRNDQ07001 517 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 UBE4AQ14139 1066 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 GPR162Q16538 588 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 METTL24Q5JXM2 366 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 DPP8Q6V1X1 898 aaPredicted RBP12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 ZNF594Q96JF6 807 aaPredicted RBP12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 EYA3Q99504 573 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 DCTPP1Q9H773 170 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 GPR108Q9NPR9 543 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 EMILIN3Q9NT22 766 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 ANKIB1Q9P2G1 1089 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 CEP126Q9P2H0 1117 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 SLX4Q8IY92 1834 aa12.23□□□□□ -0.45
KNSTRN-215ENST00000561367 FKBP4Q02790 459 aaKnown RBP eCLIP12.22□□□□□ -0.45
KNSTRN-215ENST00000561367 OS9Q13438 667 aaPredicted RBP12.22□□□□□ -0.45
KNSTRN-215ENST00000561367 LRRC24Q50LG9 513 aa12.22□□□□□ -0.45
KNSTRN-215ENST00000561367 ATG9AQ7Z3C6 839 aa12.22□□□□□ -0.45
KNSTRN-215ENST00000561367 KIF1BPQ96EK5 621 aa12.22□□□□□ -0.45
KNSTRN-215ENST00000561367 GGA1Q9UJY5 639 aa12.22□□□□□ -0.45
KNSTRN-215ENST00000561367 NSFL1CQ9UNZ2 370 aaKnown RBP12.22□□□□□ -0.45
KNSTRN-215ENST00000561367 TBC1D12O60347 775 aa12.21□□□□□ -0.45
KNSTRN-215ENST00000561367 KCNJ4P48050 445 aa12.21□□□□□ -0.45
KNSTRN-215ENST00000561367 PUM3Q15397 648 aaKnown RBP12.21□□□□□ -0.45
KNSTRN-215ENST00000561367 C15orf52Q6ZUT6 534 aaKnown RBP12.21□□□□□ -0.45
KNSTRN-215ENST00000561367 VGLL2Q8N8G2 317 aa12.21□□□□□ -0.45
KNSTRN-215ENST00000561367 KLHDC4Q8TBB5 520 aa12.21□□□□□ -0.45
KNSTRN-215ENST00000561367 SIL1Q9H173 461 aa12.21□□□□□ -0.45
KNSTRN-215ENST00000561367 TAOK3Q9H2K8 898 aa12.21□□□□□ -0.45
KNSTRN-215ENST00000561367 PA2G4Q9UQ80 394 aaKnown RBP12.21□□□□□ -0.45
KNSTRN-215ENST00000561367 MED23Q9ULK4 1368 aa12.2□□□□□ -0.46
KNSTRN-215ENST00000561367 ZNF804BA4D1E1 1349 aa12.2□□□□□ -0.46
KNSTRN-215ENST00000561367 GPSM2P81274 684 aa12.2□□□□□ -0.46
KNSTRN-215ENST00000561367 LSM11P83369 360 aaKnown RBP eCLIP12.2□□□□□ -0.46
KNSTRN-215ENST00000561367 TBC1D16Q8TBP0 767 aa12.2□□□□□ -0.46
KNSTRN-215ENST00000561367 LPIN2Q92539 896 aa12.2□□□□□ -0.46
KNSTRN-215ENST00000561367 PUS3Q9BZE2 481 aaKnown RBP12.2□□□□□ -0.46
KNSTRN-215ENST00000561367 COL4A1P02462 1669 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 C6orf229H3BNL8 230 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 UFL1O94874 794 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 IFIT1P09914 478 aaKnown RBP12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 YBX3P16989 372 aaKnown RBP eCLIP12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 ARHGAP27Q6ZUM4 889 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 SMC5Q8IY18 1101 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 CLASRPQ8N2M8 674 aaKnown RBP12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 SPRYD3Q8NCJ5 442 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 LRRCC1Q9C099 1032 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 ZC3H12CQ9C0D7 883 aaKnown RBP12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 LTBP1Q14766 1721 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
KNSTRN-215ENST00000561367 ZC3H4Q9UPT8 1303 aaKnown RBP12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 NFKBIEO00221 500 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 SASH1O94885 1247 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 SLC5A1P13866 664 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 LMNB1P20700 586 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 FGFR2P21802 821 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 KIAA2012Q0VF49 1180 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 WASHC4Q2M389 1173 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 CAVIN4Q5BKX8 364 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 RHPN1Q8TCX5 695 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 TAF1P21675 1872 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 FER1L6Q2WGJ9 1857 aa12.18□□□□□ -0.46
KNSTRN-215ENST00000561367 SPEF2Q9C093 1822 aa12.17□□□□□ -0.46
KNSTRN-215ENST00000561367 PBX2P40425 430 aa12.17□□□□□ -0.46
KNSTRN-215ENST00000561367 IARSP41252 1262 aaKnown RBP12.17□□□□□ -0.46
KNSTRN-215ENST00000561367 TFCP2Q12800 502 aa12.17□□□□□ -0.46
KNSTRN-215ENST00000561367 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
KNSTRN-215ENST00000561367 PPP4R2Q9NY27 417 aa12.17□□□□□ -0.46
KNSTRN-215ENST00000561367 POLLQ9UGP5 575 aa12.17□□□□□ -0.46
KNSTRN-215ENST00000561367 DUOX1Q9NRD9 1551 aa12.17□□□□□ -0.46
KNSTRN-215ENST00000561367 A0A1B0GUL7 405 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 TAF5LO75529 589 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 TNNI3KQ59H18 835 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 CENPQQ7L2Z9 268 aaPredicted RBP12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 ZNF804AQ7Z570 1209 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 PODNQ7Z5L7 613 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 HELBQ8NG08 1087 aaPredicted RBP12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 JDP2Q8WYK2 163 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 CCDC136Q96JN2 1154 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 COA1Q9GZY4 146 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 WWC3Q9ULE0 1092 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 FPGT-TNNI3KV9GXZ4 949 aa12.16□□□□□ -0.46
KNSTRN-215ENST00000561367 A0A1B0GUL6 1792 aa12.15□□□□□ -0.46
KNSTRN-215ENST00000561367 ZNF609O15014 1411 aa12.15□□□□□ -0.46
KNSTRN-215ENST00000561367 PPIP5K2O43314 1243 aa12.15□□□□□ -0.46
KNSTRN-215ENST00000561367 LARGE2Q8N3Y3 721 aa12.15□□□□□ -0.46
KNSTRN-215ENST00000561367 GNL3LQ9NVN8 582 aaKnown RBP12.15□□□□□ -0.46
KNSTRN-215ENST00000561367 GOLGB1Q14789 3259 aaKnown RBP12.15□□□□□ -0.46
KNSTRN-215ENST00000561367 SEMA3EO15041 775 aa12.14□□□□□ -0.47
KNSTRN-215ENST00000561367 IGHDP01880 384 aa12.14□□□□□ -0.47
KNSTRN-215ENST00000561367 IFIT2P09913 472 aaKnown RBP12.14□□□□□ -0.47
KNSTRN-215ENST00000561367 HIBADHP31937 336 aaKnown RBP12.14□□□□□ -0.47
KNSTRN-215ENST00000561367 PSEN2P49810 448 aa12.14□□□□□ -0.47
KNSTRN-215ENST00000561367 CCDC158Q5M9N0 1113 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms