RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 NOB1Q9ULX3 412 aaKnown RBP6.98□□□□□ -1.29
ZEB1-220ENST00000560909 SUPT16HQ9Y5B9 1047 aaKnown RBP6.98□□□□□ -1.29
ZEB1-220ENST00000560909 ABCC4O15439 1325 aa6.98□□□□□ -1.29
ZEB1-220ENST00000560909 C5P01031 1676 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 ERVV-1B6SEH8 477 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 TRIM27P14373 513 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 GCGRP47871 477 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 TJP1Q07157 1748 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 TRIM28Q13263 835 aaKnown RBP6.97□□□□□ -1.29
ZEB1-220ENST00000560909 ZKSCAN2Q63HK3 967 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 INTS3Q68E01 1043 aaKnown RBP6.97□□□□□ -1.29
ZEB1-220ENST00000560909 KRTAP5-3Q6L8H2 238 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 ALYREFQ86V81 257 aaKnown RBP6.97□□□□□ -1.29
ZEB1-220ENST00000560909 MPNDQ8N594 471 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 API5Q9BZZ5 524 aaKnown RBP6.97□□□□□ -1.29
ZEB1-220ENST00000560909 PHAXQ9H814 394 aaKnown RBP6.97□□□□□ -1.29
ZEB1-220ENST00000560909 ZBTB1Q9Y2K1 713 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 RGPD3A6NKT7 1758 aaPredicted RBP6.97□□□□□ -1.29
ZEB1-220ENST00000560909 RGPD4Q7Z3J3 1758 aa6.97□□□□□ -1.29
ZEB1-220ENST00000560909 ADCY9O60503 1353 aa6.96□□□□□ -1.29
ZEB1-220ENST00000560909 TNS1Q9HBL0 1735 aaKnown RBP6.96□□□□□ -1.29
ZEB1-220ENST00000560909 SLC35F4A4IF30 521 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 TTLL8A6PVC2 850 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 TCERG1O14776 1098 aaKnown RBP6.96□□□□□ -1.3
ZEB1-220ENST00000560909 ANXA1P04083 346 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 BCRP11274 1271 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 MS4A1P11836 297 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 RLBP1P12271 317 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 KCNQ4P56696 695 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 GAS6Q14393 721 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 KSR2Q6VAB6 950 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 COPS6Q7L5N1 327 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.96□□□□□ -1.3
ZEB1-220ENST00000560909 PLBD2Q8NHP8 589 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 PXYLP1Q8TE99 480 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 XAGE3Q8WTP9 111 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 BCL2L13Q9BXK5 485 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 CACNA1FO60840 1977 aa6.96□□□□□ -1.3
ZEB1-220ENST00000560909 MYH14Q7Z406 1995 aaKnown RBP6.95□□□□□ -1.3
ZEB1-220ENST00000560909 ATP10DQ9P241 1426 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 A0A087WZG4 1122 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 PI4KAP2A4QPH2 592 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 FIGNL2A6NMB9 653 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 CAMTA2O94983 1202 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 COL8A1P27658 744 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 SSFA2P28290 1259 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 EZH2Q15910 746 aaKnown RBP6.95□□□□□ -1.3
ZEB1-220ENST00000560909 BEND3Q5T5X7 828 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 CLEC4GQ6UXB4 293 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 TTLL7Q6ZT98 887 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 AMIGO3Q86WK7 504 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 DZIP1LQ8IYY4 767 aaKnown RBP6.95□□□□□ -1.3
ZEB1-220ENST00000560909 MEIOBQ8N635 442 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 PI4KAP1Q8N8J0 262 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 MAP3K15Q6ZN16 1313 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 LAMB4A4D0S4 1761 aa6.95□□□□□ -1.3
ZEB1-220ENST00000560909 PXDNLA1KZ92 1463 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 COL5A3P25940 1745 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-220ENST00000560909 DDX11L8A8MPP1 907 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 C1QTNF9BB2RNN3 333 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 PLIN1O60240 522 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 ALDH1L1O75891 902 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 DDX58O95786 925 aaKnown RBP6.94□□□□□ -1.3
ZEB1-220ENST00000560909 MYL6BP14649 208 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 CANXP27824 592 aaKnown RBP6.94□□□□□ -1.3
ZEB1-220ENST00000560909 PIP4K2AP48426 406 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-220ENST00000560909 SF3B2Q13435 895 aaKnown RBP6.94□□□□□ -1.3
ZEB1-220ENST00000560909 FKBP5Q13451 457 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-220ENST00000560909 AAMPQ13685 434 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 DOC2BQ14184 412 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 ZNF827Q17R98 1081 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 GRIPAP1Q4V328 841 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 C20orf194Q5TEA3 1177 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 ERICH6BQ5W0A0 696 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 GIGYF2Q6Y7W6 1299 aaKnown RBP6.94□□□□□ -1.3
ZEB1-220ENST00000560909 DEFB132Q7Z7B7 95 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 FLAD1Q8NFF5 587 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 DNAAF4Q8WXU2 420 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 ISCA1Q9BUE6 129 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 METTL22Q9BUU2 404 aaPredicted RBP6.94□□□□□ -1.3
ZEB1-220ENST00000560909 NARFQ9UHQ1 456 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 TNNQ9UQP3 1299 aa6.94□□□□□ -1.3
ZEB1-220ENST00000560909 RTCBQ9Y3I0 505 aaKnown RBP6.94□□□□□ -1.3
ZEB1-220ENST00000560909 F6X3S4 739 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 ZBTB7BO15156 539 aaPredicted RBP6.93□□□□□ -1.3
ZEB1-220ENST00000560909 GNPATO15228 680 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 IGKV5-2P06315 115 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 CCT4P50991 539 aaKnown RBP6.93□□□□□ -1.3
ZEB1-220ENST00000560909 FZD5Q13467 585 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 TCIRG1Q13488 830 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 SLC15A2Q16348 729 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 ZNF34Q8IZ26 560 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 LINS1Q8NG48 757 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 MAP3K2Q9Y2U5 619 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 UTYO14607 1347 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 COL15A1P39059 1388 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 C4BP0C0L5 1744 aa6.93□□□□□ -1.3
ZEB1-220ENST00000560909 TAF1LQ8IZX4 1826 aa6.92□□□□□ -1.3
ZEB1-220ENST00000560909 CASP7P55210 303 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms