RNA–Protein interactions for RNA: ENST00000560884.5

CPNE6-219, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-219ENST00000560884 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
CPNE6-219ENST00000560884 ZBED3Q96IU2 234 aaPredicted RBP16.37■□□□□ 0.21
CPNE6-219ENST00000560884 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
CPNE6-219ENST00000560884 JAG2Q9Y219 1238 aa16.37■□□□□ 0.21
CPNE6-219ENST00000560884 ADM5C9JUS6 153 aa16.36■□□□□ 0.21
CPNE6-219ENST00000560884 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
CPNE6-219ENST00000560884 IL15P40933 162 aaPredicted RBP16.36■□□□□ 0.21
CPNE6-219ENST00000560884 MMP14P50281 582 aa16.36■□□□□ 0.21
CPNE6-219ENST00000560884 SCARF1Q14162 830 aa16.36■□□□□ 0.21
CPNE6-219ENST00000560884 ANGEL2Q5VTE6 544 aaKnown RBP16.36■□□□□ 0.21
CPNE6-219ENST00000560884 KRT26Q7Z3Y9 468 aa16.36■□□□□ 0.21
CPNE6-219ENST00000560884 LPIN2Q92539 896 aa16.36■□□□□ 0.21
CPNE6-219ENST00000560884 PITPNM2Q9BZ72 1349 aa16.36■□□□□ 0.21
CPNE6-219ENST00000560884 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
CPNE6-219ENST00000560884 WNT10BO00744 389 aa16.35■□□□□ 0.21
CPNE6-219ENST00000560884 BCAMP50895 628 aa16.35■□□□□ 0.21
CPNE6-219ENST00000560884 NBPF9Q3BBW0 867 aa16.35■□□□□ 0.21
CPNE6-219ENST00000560884 USP48Q86UV5 1035 aa16.35■□□□□ 0.21
CPNE6-219ENST00000560884 OGFOD1Q8N543 542 aa16.35■□□□□ 0.21
CPNE6-219ENST00000560884 DCPSQ96C86 337 aaKnown RBP16.35■□□□□ 0.21
CPNE6-219ENST00000560884 MKRN1Q9UHC7 482 aaKnown RBP16.35■□□□□ 0.21
CPNE6-219ENST00000560884 PAPPA2Q9BXP8 1791 aa16.34■□□□□ 0.21
CPNE6-219ENST00000560884 IFIT1P09914 478 aaKnown RBP16.34■□□□□ 0.21
CPNE6-219ENST00000560884 SLC5A1P13866 664 aa16.34■□□□□ 0.21
CPNE6-219ENST00000560884 POLA2Q14181 598 aa16.34■□□□□ 0.21
CPNE6-219ENST00000560884 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
CPNE6-219ENST00000560884 CAVIN4Q5BKX8 364 aa16.34■□□□□ 0.21
CPNE6-219ENST00000560884 C1orf115Q9H7X2 142 aa16.34■□□□□ 0.21
CPNE6-219ENST00000560884 CEP126Q9P2H0 1117 aa16.34■□□□□ 0.21
CPNE6-219ENST00000560884 IQSEC3Q9UPP2 1182 aaPredicted RBP16.34■□□□□ 0.21
CPNE6-219ENST00000560884 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.34■□□□□ 0.21
CPNE6-219ENST00000560884 CELF2O95319 508 aaKnown RBP16.33■□□□□ 0.2
CPNE6-219ENST00000560884 MFSD14BQ5SR56 506 aa16.33■□□□□ 0.2
CPNE6-219ENST00000560884 MTMR14Q8NCE2 650 aa16.33■□□□□ 0.2
CPNE6-219ENST00000560884 SSH3Q8TE77 659 aa16.33■□□□□ 0.2
CPNE6-219ENST00000560884 HDAC9Q9UKV0 1011 aa16.33■□□□□ 0.2
CPNE6-219ENST00000560884 PCDHAC2Q9Y5I4 1007 aa16.33■□□□□ 0.2
CPNE6-219ENST00000560884 TLL2Q9Y6L7 1015 aa16.33■□□□□ 0.2
CPNE6-219ENST00000560884 AOX1Q06278 1338 aa16.32■□□□□ 0.2
CPNE6-219ENST00000560884 GRIK5Q16478 980 aa16.32■□□□□ 0.2
CPNE6-219ENST00000560884 VPS37DQ86XT2 251 aa16.32■□□□□ 0.2
CPNE6-219ENST00000560884 SULF1Q8IWU6 871 aa16.32■□□□□ 0.2
CPNE6-219ENST00000560884 F8W031 263 aaPredicted RBP16.31■□□□□ 0.2
CPNE6-219ENST00000560884 VEGFBP49765 207 aa16.31■□□□□ 0.2
CPNE6-219ENST00000560884 ATP8B2P98198 1209 aa16.31■□□□□ 0.2
CPNE6-219ENST00000560884 TFCP2Q12800 502 aa16.31■□□□□ 0.2
CPNE6-219ENST00000560884 SAPCD2Q86UD0 394 aa16.31■□□□□ 0.2
CPNE6-219ENST00000560884 ZNF408Q9H9D4 720 aa16.31■□□□□ 0.2
CPNE6-219ENST00000560884 ABT1Q9ULW3 272 aaKnown RBP16.31■□□□□ 0.2
CPNE6-219ENST00000560884 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
CPNE6-219ENST00000560884 ZBTB22O15209 634 aa16.3■□□□□ 0.2
CPNE6-219ENST00000560884 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
CPNE6-219ENST00000560884 MS4A1P11836 297 aa16.3■□□□□ 0.2
CPNE6-219ENST00000560884 ADORA1P30542 326 aa16.3■□□□□ 0.2
CPNE6-219ENST00000560884 CHAF1AQ13111 956 aaPredicted RBP16.3■□□□□ 0.2
CPNE6-219ENST00000560884 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
CPNE6-219ENST00000560884 CDCA5Q96FF9 252 aa16.3■□□□□ 0.2
CPNE6-219ENST00000560884 SCAF8Q9UPN6 1271 aaKnown RBP16.3■□□□□ 0.2
CPNE6-219ENST00000560884 AKAP11Q9UKA4 1901 aa16.29■□□□□ 0.2
CPNE6-219ENST00000560884 PHKA1P46020 1223 aa16.29■□□□□ 0.2
CPNE6-219ENST00000560884 DLGAP5Q15398 846 aa16.29■□□□□ 0.2
CPNE6-219ENST00000560884 DEFB115Q30KQ5 88 aa16.29■□□□□ 0.2
CPNE6-219ENST00000560884 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
CPNE6-219ENST00000560884 CEP85Q6P2H3 762 aa16.29■□□□□ 0.2
CPNE6-219ENST00000560884 TBC1D22AQ8WUA7 517 aa16.29■□□□□ 0.2
CPNE6-219ENST00000560884 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
CPNE6-219ENST00000560884 MYH2Q9UKX2 1941 aa16.28■□□□□ 0.2
CPNE6-219ENST00000560884 A0A1B0GUL7 405 aa16.28■□□□□ 0.2
CPNE6-219ENST00000560884 C20orf194Q5TEA3 1177 aa16.28■□□□□ 0.2
CPNE6-219ENST00000560884 HHIPL1Q96JK4 782 aa16.28■□□□□ 0.2
CPNE6-219ENST00000560884 SERPINA10Q9UK55 444 aa16.28■□□□□ 0.2
CPNE6-219ENST00000560884 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
CPNE6-219ENST00000560884 COG6Q9Y2V7 657 aa16.28■□□□□ 0.2
CPNE6-219ENST00000560884 SSC5DA1L4H1 1573 aa16.28■□□□□ 0.2
CPNE6-219ENST00000560884 LAMB1P07942 1786 aa16.28■□□□□ 0.2
CPNE6-219ENST00000560884 MAST2Q6P0Q8 1798 aa16.28■□□□□ 0.2
CPNE6-219ENST00000560884 FRAT2O75474 233 aaPredicted RBP16.27■□□□□ 0.2
CPNE6-219ENST00000560884 TIMM10P62072 90 aa16.27■□□□□ 0.2
CPNE6-219ENST00000560884 CCDC102BQ68D86 513 aa16.27■□□□□ 0.2
CPNE6-219ENST00000560884 APOBEC3FQ8IUX4 373 aaKnown RBP16.27■□□□□ 0.2
CPNE6-219ENST00000560884 PRMT6Q96LA8 375 aaPredicted RBP16.27■□□□□ 0.2
CPNE6-219ENST00000560884 GBA2Q9HCG7 927 aaPredicted RBP16.27■□□□□ 0.2
CPNE6-219ENST00000560884 DDX19BQ9UMR2 479 aa16.27■□□□□ 0.2
CPNE6-219ENST00000560884 AKAP2Q9Y2D5 859 aa16.27■□□□□ 0.2
CPNE6-219ENST00000560884 NOP58Q9Y2X3 529 aaKnown RBP16.27■□□□□ 0.2
CPNE6-219ENST00000560884 MYO5AQ9Y4I1 1855 aaKnown RBP16.27■□□□□ 0.19
CPNE6-219ENST00000560884 WDR33Q9C0J8 1336 aaKnown RBP16.26■□□□□ 0.19
CPNE6-219ENST00000560884 CYP4F22Q6NT55 531 aa16.26■□□□□ 0.19
CPNE6-219ENST00000560884 XAGE2Q96GT9 111 aa16.26■□□□□ 0.19
CPNE6-219ENST00000560884 CAPNS2Q96L46 248 aa16.26■□□□□ 0.19
CPNE6-219ENST00000560884 ZBTB40Q9NUA8 1239 aa16.26■□□□□ 0.19
CPNE6-219ENST00000560884 PDS5AQ29RF7 1337 aaKnown RBP16.25■□□□□ 0.19
CPNE6-219ENST00000560884 SALL1Q9NSC2 1324 aa16.25■□□□□ 0.19
CPNE6-219ENST00000560884 CLRN2A0PK11 232 aa16.25■□□□□ 0.19
CPNE6-219ENST00000560884 SEMA3EO15041 775 aa16.25■□□□□ 0.19
CPNE6-219ENST00000560884 CRKP46108 304 aa16.25■□□□□ 0.19
CPNE6-219ENST00000560884 HDLBPQ00341 1268 aaKnown RBP16.25■□□□□ 0.19
CPNE6-219ENST00000560884 G3BP1Q13283 466 aaKnown RBP eCLIP16.25■□□□□ 0.19
CPNE6-219ENST00000560884 RASGRF1Q13972 1273 aa16.25■□□□□ 0.19
CPNE6-219ENST00000560884 PDE3AQ14432 1141 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms