RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 TRPM1Q7Z4N2 1603 aa11.35□□□□□ -0.59
TRPM1-212ENST00000560801 ILDR2Q71H61 639 aa11.35□□□□□ -0.59
TRPM1-212ENST00000560801 SPATA5Q8NB90 893 aa11.35□□□□□ -0.59
TRPM1-212ENST00000560801 PPP4R3AQ6IN85 833 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 CDC37L1Q7L3B6 337 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 CCDC82Q8N4S0 544 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 SMC1BQ8NDV3 1235 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 TGFBRAP1Q8WUH2 860 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 CSRNP1Q96S65 589 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
TRPM1-212ENST00000560801 SMC3Q9UQE7 1217 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 SASH1O94885 1247 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 HOXD10P28358 340 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 TNS2Q63HR2 1409 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 OSBPP22059 807 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 FOXD4L5Q5VV16 416 aaPredicted RBP11.34□□□□□ -0.59
TRPM1-212ENST00000560801 FOXD4L4Q8WXT5 416 aaPredicted RBP11.34□□□□□ -0.59
TRPM1-212ENST00000560801 SLC12A7Q9Y666 1083 aa11.34□□□□□ -0.59
TRPM1-212ENST00000560801 ZBED4O75132 1171 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 KDRP35968 1356 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 ZNF827Q17R98 1081 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 VPS37CA5D8V6 355 aaPredicted RBP11.33□□□□□ -0.6
TRPM1-212ENST00000560801 MBD4O95243 580 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 CSPP1Q1MSJ5 1256 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 CFAP100Q494V2 611 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 PHLPP1O60346 1717 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 EPHX2P34913 555 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 CPXCR1Q8N123 301 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 CA8P35219 290 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 TRMT1LQ7Z2T5 733 aaKnown RBP11.33□□□□□ -0.6
TRPM1-212ENST00000560801 CELF1Q92879 486 aaKnown RBP11.33□□□□□ -0.6
TRPM1-212ENST00000560801 CAMKK2Q96RR4 588 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 ATP6V0A2Q9Y487 856 aa11.33□□□□□ -0.6
TRPM1-212ENST00000560801 PDE8BO95263 885 aa11.32□□□□□ -0.6
TRPM1-212ENST00000560801 ATP6V1DQ9Y5K8 247 aa11.32□□□□□ -0.6
TRPM1-212ENST00000560801 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
TRPM1-212ENST00000560801 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
TRPM1-212ENST00000560801 RASSF7Q02833 373 aa11.32□□□□□ -0.6
TRPM1-212ENST00000560801 DBNDD2Q9BQY9 259 aa11.32□□□□□ -0.6
TRPM1-212ENST00000560801 BTDP43251 543 aa11.32□□□□□ -0.6
TRPM1-212ENST00000560801 VWDEQ8N2E2 1590 aa11.32□□□□□ -0.6
TRPM1-212ENST00000560801 TNNI3KQ59H18 835 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 FPGT-TNNI3KV9GXZ4 949 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 PES1O00541 588 aaKnown RBP11.31□□□□□ -0.6
TRPM1-212ENST00000560801 STK3Q13188 491 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 ANKRD1Q15327 319 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 TMEM67Q5HYA8 995 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 DPP9Q86TI2 863 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 UBR1Q8IWV7 1749 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
TRPM1-212ENST00000560801 CKAP2LQ8IYA6 745 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 CCDC12Q8WUD4 166 aaPredicted RBP11.31□□□□□ -0.6
TRPM1-212ENST00000560801 KRT23Q9C075 422 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 SAMM50Q9Y512 469 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 TXLNAP40222 546 aa11.31□□□□□ -0.6
TRPM1-212ENST00000560801 TPD52L1Q16890 204 aaPredicted RBP11.31□□□□□ -0.6
TRPM1-212ENST00000560801 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
TRPM1-212ENST00000560801 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
TRPM1-212ENST00000560801 ZHX3Q9H4I2 956 aa11.3□□□□□ -0.6
TRPM1-212ENST00000560801 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
TRPM1-212ENST00000560801 NOL7Q9UMY1 257 aaKnown RBP11.3□□□□□ -0.6
TRPM1-212ENST00000560801 SEMA3EO15041 775 aa11.3□□□□□ -0.6
TRPM1-212ENST00000560801 RNF113AO15541 343 aaKnown RBP11.3□□□□□ -0.6
TRPM1-212ENST00000560801 DDNO94850 711 aaPredicted RBP11.3□□□□□ -0.6
TRPM1-212ENST00000560801 TBC1D9Q6ZT07 1266 aa11.3□□□□□ -0.6
TRPM1-212ENST00000560801 TTLL11Q8NHH1 800 aa11.3□□□□□ -0.6
TRPM1-212ENST00000560801 WASF1Q92558 559 aa11.3□□□□□ -0.6
TRPM1-212ENST00000560801 GOPCQ9HD26 462 aa11.3□□□□□ -0.6
TRPM1-212ENST00000560801 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRPM1-212ENST00000560801 FOXD4L6Q3SYB3 417 aaPredicted RBP11.3□□□□□ -0.6
TRPM1-212ENST00000560801 FOXD4L3Q6VB84 417 aaPredicted RBP11.3□□□□□ -0.6
TRPM1-212ENST00000560801 SMARCC2Q8TAQ2 1214 aa11.3□□□□□ -0.6
TRPM1-212ENST00000560801 NEK4P51957 841 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 IFIT1BQ5T764 474 aaKnown RBP11.29□□□□□ -0.6
TRPM1-212ENST00000560801 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 MIGA2Q7L4E1 593 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 CNNM2Q9H8M5 875 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 CCDC102BQ68D86 513 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 PLEKHG2Q9H7P9 1386 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 GOLGA6L6A8MZA4 724 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 MATR3P43243 847 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRPM1-212ENST00000560801 GNAQP50148 359 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 LRRC24Q50LG9 513 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 BEND3Q5T5X7 828 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 TSHZ3Q63HK5 1081 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 PTF1AQ7RTS3 328 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 GPSM2P81274 684 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
TRPM1-212ENST00000560801 NBPF15Q8N660 670 aa11.29□□□□□ -0.6
TRPM1-212ENST00000560801 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
TRPM1-212ENST00000560801 RPS12P25398 132 aaKnown RBP11.28□□□□□ -0.6
TRPM1-212ENST00000560801 SLC1A4P43007 532 aa11.28□□□□□ -0.6
TRPM1-212ENST00000560801 CERKLQ49MI3 558 aaPredicted RBP11.28□□□□□ -0.6
TRPM1-212ENST00000560801 NCOA7Q8NI08 942 aa11.28□□□□□ -0.6
TRPM1-212ENST00000560801 WRNIP1Q96S55 665 aa11.28□□□□□ -0.6
TRPM1-212ENST00000560801 ARMT1Q9H993 441 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms