RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 TNFAIP1Q13829 316 aa12.26□□□□□ -0.45
HERC1-209ENST00000560519 PRKG1Q13976 671 aa12.26□□□□□ -0.45
HERC1-209ENST00000560519 SUPT20HL1Q3ZLR7 823 aa12.26□□□□□ -0.45
HERC1-209ENST00000560519 INTS3Q68E01 1043 aaKnown RBP12.26□□□□□ -0.45
HERC1-209ENST00000560519 OTUD7BQ6GQQ9 843 aa12.26□□□□□ -0.45
HERC1-209ENST00000560519 C15orf52Q6ZUT6 534 aaKnown RBP12.26□□□□□ -0.45
HERC1-209ENST00000560519 TXNRD3Q86VQ6 643 aa12.26□□□□□ -0.45
HERC1-209ENST00000560519 DNAAF4Q8WXU2 420 aa12.26□□□□□ -0.45
HERC1-209ENST00000560519 ZBED3Q96IU2 234 aaPredicted RBP12.26□□□□□ -0.45
HERC1-209ENST00000560519 DEFB129Q9H1M3 183 aa12.26□□□□□ -0.45
HERC1-209ENST00000560519 CSF1RP07333 972 aa12.25□□□□□ -0.45
HERC1-209ENST00000560519 KLRK1P26718 216 aa12.25□□□□□ -0.45
HERC1-209ENST00000560519 IREB2P48200 963 aaKnown RBP12.25□□□□□ -0.45
HERC1-209ENST00000560519 IFIT5Q13325 482 aaKnown RBP12.25□□□□□ -0.45
HERC1-209ENST00000560519 NCBP3Q53F19 620 aaKnown RBP12.25□□□□□ -0.45
HERC1-209ENST00000560519 IFNL1Q8IU54 200 aa12.25□□□□□ -0.45
HERC1-209ENST00000560519 ERO1AQ96HE7 468 aa12.25□□□□□ -0.45
HERC1-209ENST00000560519 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
HERC1-209ENST00000560519 CASP7P55210 303 aa12.24□□□□□ -0.45
HERC1-209ENST00000560519 SLC10A4Q96EP9 437 aa12.24□□□□□ -0.45
HERC1-209ENST00000560519 WNK4Q96J92 1243 aa12.24□□□□□ -0.45
HERC1-209ENST00000560519 TRIM17Q9Y577 477 aa12.24□□□□□ -0.45
HERC1-209ENST00000560519 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
HERC1-209ENST00000560519 SPDYE2BA6NHP3 402 aa12.23□□□□□ -0.45
HERC1-209ENST00000560519 SPDYE6P0CI01 402 aa12.23□□□□□ -0.45
HERC1-209ENST00000560519 IL1R1P14778 569 aa12.23□□□□□ -0.45
HERC1-209ENST00000560519 TAF7LQ5H9L4 462 aa12.23□□□□□ -0.45
HERC1-209ENST00000560519 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
HERC1-209ENST00000560519 ANKRD13AQ8IZ07 590 aa12.23□□□□□ -0.45
HERC1-209ENST00000560519 CHMP3Q9Y3E7 222 aa12.23□□□□□ -0.45
HERC1-209ENST00000560519 IRS2Q9Y4H2 1338 aa12.22□□□□□ -0.45
HERC1-209ENST00000560519 CCDC57Q2TAC2 916 aa12.22□□□□□ -0.45
HERC1-209ENST00000560519 CFAP100Q494V2 611 aa12.22□□□□□ -0.45
HERC1-209ENST00000560519 G2E3Q7L622 706 aa12.22□□□□□ -0.45
HERC1-209ENST00000560519 CERS5Q8N5B7 392 aa12.22□□□□□ -0.45
HERC1-209ENST00000560519 VEZTQ9HBM0 779 aa12.22□□□□□ -0.45
HERC1-209ENST00000560519 CLRN2A0PK11 232 aa12.21□□□□□ -0.45
HERC1-209ENST00000560519 F8W031 263 aaPredicted RBP12.21□□□□□ -0.45
HERC1-209ENST00000560519 RBM5P52756 815 aaKnown RBP eCLIP12.21□□□□□ -0.45
HERC1-209ENST00000560519 ARHGEF6Q15052 776 aa12.21□□□□□ -0.45
HERC1-209ENST00000560519 OTOP1Q7RTM1 612 aa12.21□□□□□ -0.45
HERC1-209ENST00000560519 PDE4DIPQ5VU43 2346 aa12.21□□□□□ -0.46
HERC1-209ENST00000560519 IGF2BP3O00425 579 aaKnown RBP eCLIP12.2□□□□□ -0.46
HERC1-209ENST00000560519 TAF5LO75529 589 aa12.2□□□□□ -0.46
HERC1-209ENST00000560519 WDHD1O75717 1129 aaPredicted RBP12.2□□□□□ -0.46
HERC1-209ENST00000560519 TNNI2P48788 182 aa12.2□□□□□ -0.46
HERC1-209ENST00000560519 LDHAL6AQ6ZMR3 332 aa12.2□□□□□ -0.46
HERC1-209ENST00000560519 CNNM1Q9NRU3 951 aa12.2□□□□□ -0.46
HERC1-209ENST00000560519 FAM205AQ6ZU69 1335 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 GRM8O00222 908 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 FOXO4P98177 505 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 SP3Q02447 781 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 CRHR2Q13324 411 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 RASA3Q14644 834 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 CLMNQ96JQ2 1002 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 FZD1Q9UP38 647 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 PTPN22Q9Y2R2 807 aa12.19□□□□□ -0.46
HERC1-209ENST00000560519 HTTP42858 3142 aa12.18□□□□□ -0.46
HERC1-209ENST00000560519 TESPA1A2RU30 521 aaPredicted RBP12.18□□□□□ -0.46
HERC1-209ENST00000560519 SPDYE2Q495Y8 402 aa12.18□□□□□ -0.46
HERC1-209ENST00000560519 MFSD14BQ5SR56 506 aa12.18□□□□□ -0.46
HERC1-209ENST00000560519 NBPF12Q5TAG4 269 aaPredicted RBP12.18□□□□□ -0.46
HERC1-209ENST00000560519 OPTNQ96CV9 577 aa12.18□□□□□ -0.46
HERC1-209ENST00000560519 PRMT6Q96LA8 375 aaPredicted RBP12.18□□□□□ -0.46
HERC1-209ENST00000560519 R3HDMLQ9H3Y0 253 aa12.18□□□□□ -0.46
HERC1-209ENST00000560519 EFCC1Q9HA90 598 aa12.18□□□□□ -0.46
HERC1-209ENST00000560519 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.18□□□□□ -0.46
HERC1-209ENST00000560519 CSADQ9Y600 493 aa12.18□□□□□ -0.46
HERC1-209ENST00000560519 DOCK2Q92608 1830 aa12.18□□□□□ -0.46
HERC1-209ENST00000560519 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
HERC1-209ENST00000560519 BEND3Q5T5X7 828 aa12.17□□□□□ -0.46
HERC1-209ENST00000560519 LMBR1LQ6UX01 489 aa12.17□□□□□ -0.46
HERC1-209ENST00000560519 NBPF11Q86T75 865 aa12.17□□□□□ -0.46
HERC1-209ENST00000560519 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
HERC1-209ENST00000560519 HELBQ8NG08 1087 aaPredicted RBP12.17□□□□□ -0.46
HERC1-209ENST00000560519 CD99L2Q8TCZ2 262 aa12.17□□□□□ -0.46
HERC1-209ENST00000560519 ARMC5Q96C12 935 aa12.17□□□□□ -0.46
HERC1-209ENST00000560519 HOOK2Q96ED9 719 aa12.17□□□□□ -0.46
HERC1-209ENST00000560519 C9orf78Q9NZ63 289 aaPredicted RBP12.17□□□□□ -0.46
HERC1-209ENST00000560519 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
HERC1-209ENST00000560519 CENPFP49454 3210 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 MAST3O60307 1309 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 MROH5Q6ZUA9 1318 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 USP2O75604 605 aaPredicted RBP12.16□□□□□ -0.46
HERC1-209ENST00000560519 HIBADHP31937 336 aaKnown RBP12.16□□□□□ -0.46
HERC1-209ENST00000560519 GTF2A2P52657 109 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 VPS37DQ86XT2 251 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 TDRD7Q8NHU6 1098 aaKnown RBP12.16□□□□□ -0.46
HERC1-209ENST00000560519 TBC1D22AQ8WUA7 517 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 ELP3Q9H9T3 547 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 ZFYVE28Q9HCC9 887 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 ZCCHC17Q9NP64 241 aaKnown RBP12.16□□□□□ -0.46
HERC1-209ENST00000560519 TMOD2Q9NZR1 351 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 PCDHAC2Q9Y5I4 1007 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 BRCA2P51587 3418 aa12.16□□□□□ -0.46
HERC1-209ENST00000560519 RPAP1Q9BWH6 1393 aaPredicted RBP12.16□□□□□ -0.46
HERC1-209ENST00000560519 POTEFA5A3E0 1075 aa12.15□□□□□ -0.46
HERC1-209ENST00000560519 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms