RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TXNRD3Q86VQ6 643 aa13.43□□□□□ -0.26
CDC42BPB-207ENST00000560492 SLC10A4Q96EP9 437 aa13.43□□□□□ -0.26
CDC42BPB-207ENST00000560492 ANKRD2Q9GZV1 360 aa13.43□□□□□ -0.26
CDC42BPB-207ENST00000560492 TRIM17Q9Y577 477 aa13.43□□□□□ -0.26
CDC42BPB-207ENST00000560492 NEURL1BA8MQ27 555 aa13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 F8W031 263 aaPredicted RBP13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 PPP1R12BO60237 982 aaPredicted RBP13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 ALDH1A1P00352 501 aa13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 ITGA6P23229 1130 aa13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 KLRK1P26718 216 aa13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 SPRYD7Q5W111 196 aa13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 TSPYL6Q8N831 410 aa13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 TSR2Q969E8 191 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 VEZTQ9HBM0 779 aa13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 CHMP3Q9Y3E7 222 aa13.42□□□□□ -0.26
CDC42BPB-207ENST00000560492 MANSC4A6NHS7 340 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPB-207ENST00000560492 MYO1BO43795 1136 aa13.41□□□□□ -0.26
CDC42BPB-207ENST00000560492 RBM5P52756 815 aaKnown RBP eCLIP13.41□□□□□ -0.26
CDC42BPB-207ENST00000560492 R3HDMLQ9H3Y0 253 aa13.41□□□□□ -0.26
CDC42BPB-207ENST00000560492 COL1A1P02452 1464 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPB-207ENST00000560492 CLRN2A0PK11 232 aa13.4□□□□□ -0.26
CDC42BPB-207ENST00000560492 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
CDC42BPB-207ENST00000560492 MMP14P50281 582 aa13.4□□□□□ -0.26
CDC42BPB-207ENST00000560492 NOM1Q5C9Z4 860 aaKnown RBP13.4□□□□□ -0.26
CDC42BPB-207ENST00000560492 GCC1Q96CN9 775 aa13.4□□□□□ -0.26
CDC42BPB-207ENST00000560492 DEFB129Q9H1M3 183 aa13.4□□□□□ -0.26
CDC42BPB-207ENST00000560492 MYH16Q9H6N6 1097 aa13.4□□□□□ -0.26
CDC42BPB-207ENST00000560492 A0A1B0GUL6 1792 aa13.4□□□□□ -0.26
CDC42BPB-207ENST00000560492 ANKRD18BA2A2Z9 1011 aa13.39□□□□□ -0.27
CDC42BPB-207ENST00000560492 CHRNDQ07001 517 aa13.39□□□□□ -0.27
CDC42BPB-207ENST00000560492 FKBP5Q13451 457 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPB-207ENST00000560492 ZNF804AQ7Z570 1209 aa13.39□□□□□ -0.27
CDC42BPB-207ENST00000560492 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
CDC42BPB-207ENST00000560492 HELBQ8NG08 1087 aaPredicted RBP13.39□□□□□ -0.27
CDC42BPB-207ENST00000560492 WNK4Q96J92 1243 aa13.39□□□□□ -0.27
CDC42BPB-207ENST00000560492 CLMNQ96JQ2 1002 aa13.39□□□□□ -0.27
CDC42BPB-207ENST00000560492 JAG2Q9Y219 1238 aa13.39□□□□□ -0.27
CDC42BPB-207ENST00000560492 PLIN1O60240 522 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 TAF5LO75529 589 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 IREB2P48200 963 aaKnown RBP13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 INHBEP58166 350 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 TWISTNBQ3B726 338 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 SUPT20HL1Q3ZLR7 823 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 TAF7LQ5H9L4 462 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 LDLRAD1Q5T700 205 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 G2E3Q7L622 706 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 ERO1AQ96HE7 468 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 CD209Q9NNX6 404 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
CDC42BPB-207ENST00000560492 H7C1W4 665 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 SNAP23O00161 211 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 ZBTB48P10074 688 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 GCKRQ14397 625 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 CFAP100Q494V2 611 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 OTOP1Q7RTM1 612 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 CD99L2Q8TCZ2 262 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 CFHR5Q9BXR6 569 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 PCDHAC2Q9Y5I4 1007 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 PPP2R3BQ9Y5P8 575 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 OTOFQ9HC10 1997 aa13.37□□□□□ -0.27
CDC42BPB-207ENST00000560492 LAMB1P07942 1786 aa13.36□□□□□ -0.27
CDC42BPB-207ENST00000560492 IGF2BP3O00425 579 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDC42BPB-207ENST00000560492 FLIIQ13045 1269 aa13.36□□□□□ -0.27
CDC42BPB-207ENST00000560492 IFIT5Q13325 482 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-207ENST00000560492 INTS3Q68E01 1043 aaKnown RBP13.36□□□□□ -0.27
CDC42BPB-207ENST00000560492 RBBP6Q7Z6E9 1792 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 CRHR2Q13324 411 aa13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 NBPF12Q5TAG4 269 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 CERS5Q8N5B7 392 aa13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 DNAAF4Q8WXU2 420 aa13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 ZBED3Q96IU2 234 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 PLA2G12BQ9BX93 195 aa13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 EFCC1Q9HA90 598 aa13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 SSC5DA1L4H1 1573 aa13.35□□□□□ -0.27
CDC42BPB-207ENST00000560492 ANKRD13AQ8IZ07 590 aa13.34□□□□□ -0.27
CDC42BPB-207ENST00000560492 TMEM106CQ9BVX2 250 aa13.34□□□□□ -0.27
CDC42BPB-207ENST00000560492 ELP3Q9H9T3 547 aa13.34□□□□□ -0.27
CDC42BPB-207ENST00000560492 CNNM1Q9NRU3 951 aa13.34□□□□□ -0.27
CDC42BPB-207ENST00000560492 SP3Q02447 781 aa13.33□□□□□ -0.28
CDC42BPB-207ENST00000560492 TNFAIP1Q13829 316 aa13.33□□□□□ -0.28
CDC42BPB-207ENST00000560492 RASA3Q14644 834 aa13.33□□□□□ -0.28
CDC42BPB-207ENST00000560492 MAP3K11Q16584 847 aa13.33□□□□□ -0.28
CDC42BPB-207ENST00000560492 MTMR14Q8NCE2 650 aa13.33□□□□□ -0.28
CDC42BPB-207ENST00000560492 LINS1Q8NG48 757 aa13.33□□□□□ -0.28
CDC42BPB-207ENST00000560492 PRMT6Q96LA8 375 aaPredicted RBP13.33□□□□□ -0.28
CDC42BPB-207ENST00000560492 PTPN22Q9Y2R2 807 aa13.33□□□□□ -0.28
CDC42BPB-207ENST00000560492 CENPFP49454 3210 aa13.32□□□□□ -0.28
CDC42BPB-207ENST00000560492 MYCP01106 439 aaPredicted RBP13.32□□□□□ -0.28
CDC42BPB-207ENST00000560492 CSF1RP07333 972 aa13.32□□□□□ -0.28
CDC42BPB-207ENST00000560492 CCDC57Q2TAC2 916 aa13.32□□□□□ -0.28
CDC42BPB-207ENST00000560492 HABP4Q5JVS0 413 aaKnown RBP13.32□□□□□ -0.28
CDC42BPB-207ENST00000560492 OPTNQ96CV9 577 aa13.32□□□□□ -0.28
CDC42BPB-207ENST00000560492 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
CDC42BPB-207ENST00000560492 ARAP2Q8WZ64 1704 aa13.32□□□□□ -0.28
CDC42BPB-207ENST00000560492 KIAA0100Q14667 2235 aaKnown RBP13.32□□□□□ -0.28
CDC42BPB-207ENST00000560492 USP2O75604 605 aaPredicted RBP13.31□□□□□ -0.28
CDC42BPB-207ENST00000560492 WDHD1O75717 1129 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms