RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 GJA3Q9Y6H8 435 aa10.05□□□□□ -0.8
LRRC28-219ENST00000560483 UFL1O94874 794 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 ITGA6P23229 1130 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 AOC3Q16853 763 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
LRRC28-219ENST00000560483 TTLL11Q8NHH1 800 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 DDX12PQ92771 950 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 PSMD1Q99460 953 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 EYA3Q99504 573 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 RRAGCQ9HB90 399 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 TSKSQ9UJT2 592 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 LTBP3Q9NS15 1303 aa10.04□□□□□ -0.8
LRRC28-219ENST00000560483 PLIN1O60240 522 aa10.03□□□□□ -0.8
LRRC28-219ENST00000560483 UBTFL1P0CB47 393 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-219ENST00000560483 GPSM2P81274 684 aa10.03□□□□□ -0.8
LRRC28-219ENST00000560483 WASHC4Q2M389 1173 aa10.03□□□□□ -0.8
LRRC28-219ENST00000560483 ZKSCAN2Q63HK3 967 aa10.03□□□□□ -0.8
LRRC28-219ENST00000560483 LMBR1LQ6UX01 489 aa10.03□□□□□ -0.8
LRRC28-219ENST00000560483 CNNM1Q9NRU3 951 aa10.03□□□□□ -0.8
LRRC28-219ENST00000560483 GGA1Q9UJY5 639 aa10.03□□□□□ -0.8
LRRC28-219ENST00000560483 DICER1Q9UPY3 1922 aaKnown RBP10.03□□□□□ -0.8
LRRC28-219ENST00000560483 NBPF7P0C2Y1 421 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-219ENST00000560483 PRELPP51888 382 aa10.02□□□□□ -0.81
LRRC28-219ENST00000560483 SUCLG2Q96I99 432 aa10.02□□□□□ -0.81
LRRC28-219ENST00000560483 GPR101Q96P66 508 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-219ENST00000560483 ZC3H12CQ9C0D7 883 aaKnown RBP10.02□□□□□ -0.81
LRRC28-219ENST00000560483 NMRK2Q9NPI5 230 aa10.02□□□□□ -0.81
LRRC28-219ENST00000560483 HDAC5Q9UQL6 1122 aa10.02□□□□□ -0.81
LRRC28-219ENST00000560483 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.81
LRRC28-219ENST00000560483 GLTPD2A6NH11 291 aa10.01□□□□□ -0.81
LRRC28-219ENST00000560483 DDNO94850 711 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-219ENST00000560483 LMOD1P29536 600 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-219ENST00000560483 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
LRRC28-219ENST00000560483 ATF7IPQ6VMQ6 1270 aa10.01□□□□□ -0.81
LRRC28-219ENST00000560483 ZNF594Q96JF6 807 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-219ENST00000560483 PLA2G12BQ9BX93 195 aa10.01□□□□□ -0.81
LRRC28-219ENST00000560483 BICC1Q9H694 974 aaKnown RBP10.01□□□□□ -0.81
LRRC28-219ENST00000560483 FAM198AQ9UFP1 575 aa10.01□□□□□ -0.81
LRRC28-219ENST00000560483 XDHP47989 1333 aa10.01□□□□□ -0.81
LRRC28-219ENST00000560483 SMAPO00193 183 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 TRIM27P14373 513 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 CASP7P55210 303 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 FOXO4P98177 505 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 EPHA10Q5JZY3 1008 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 LDHAL6AQ6ZMR3 332 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 ITPRIPQ8IWB1 547 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 TBC1D16Q8TBP0 767 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 ARHGAP45Q92619 1136 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 ANKRD2Q9GZV1 360 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 DBNDD1Q9H9R9 158 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 BSDC1Q9NW68 430 aaPredicted RBP10□□□□□ -0.81
LRRC28-219ENST00000560483 CDKN2AIPQ9NXV6 580 aaPredicted RBP10□□□□□ -0.81
LRRC28-219ENST00000560483 TSR3Q9UJK0 312 aaKnown RBP10□□□□□ -0.81
LRRC28-219ENST00000560483 ZNF541Q9H0D2 1346 aa10□□□□□ -0.81
LRRC28-219ENST00000560483 RAD17O75943 681 aa9.99□□□□□ -0.81
LRRC28-219ENST00000560483 VEGFAP15692 232 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-219ENST00000560483 ATP2B4P23634 1241 aa9.99□□□□□ -0.81
LRRC28-219ENST00000560483 EAPPQ56P03 285 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-219ENST00000560483 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-219ENST00000560483 USP44Q9H0E7 712 aa9.99□□□□□ -0.81
LRRC28-219ENST00000560483 POLLQ9UGP5 575 aa9.99□□□□□ -0.81
LRRC28-219ENST00000560483 RCAN3Q9UKA8 241 aa9.99□□□□□ -0.81
LRRC28-219ENST00000560483 ZNRF3Q9ULT6 936 aa9.99□□□□□ -0.81
LRRC28-219ENST00000560483 MINPP1Q9UNW1 487 aa9.99□□□□□ -0.81
LRRC28-219ENST00000560483 IQCA1LA6NCM1 817 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 ECE2O60344 883 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 TAF5LO75529 589 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 CSF1RP07333 972 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 GNAI3P08754 354 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-219ENST00000560483 CHRNDQ07001 517 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 KIAA2012Q0VF49 1180 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 TNIP1Q15025 636 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 CIAPIN1Q6FI81 312 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 NYAP1Q6ZVC0 841 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 DZIP1LQ8IYY4 767 aaKnown RBP9.98□□□□□ -0.81
LRRC28-219ENST00000560483 TMEM57Q8N5G2 664 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-219ENST00000560483 LRCH3Q96II8 777 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 VPS33BQ9H267 617 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 TNNQ9UQP3 1299 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 LRRFIP2Q9Y608 721 aaKnown RBP9.98□□□□□ -0.81
LRRC28-219ENST00000560483 RTL9Q8NET4 1388 aa9.98□□□□□ -0.81
LRRC28-219ENST00000560483 COL4A1P02462 1669 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 FZD9O00144 591 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 MS4A1P11836 297 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 TJAP1Q5JTD0 557 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 VPS37DQ86XT2 251 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 GPC2Q8N158 579 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 MEIS3Q99687 375 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 RTFDC1Q9BY42 306 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-219ENST00000560483 SIL1Q9H173 461 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 HACL1Q9UJ83 578 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 ZNF804BA4D1E1 1349 aa9.97□□□□□ -0.81
LRRC28-219ENST00000560483 LRRC37AA6NMS7 1700 aa9.96□□□□□ -0.81
LRRC28-219ENST00000560483 TOMM70O94826 608 aa9.96□□□□□ -0.82
LRRC28-219ENST00000560483 GNAI2P04899 355 aa9.96□□□□□ -0.82
LRRC28-219ENST00000560483 C1QTNF8P60827 252 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms