RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 NECTIN2Q92692 538 aa8.88□□□□□ -0.99
HERC1-208ENST00000560462 NECAB3Q96P71 396 aaPredicted RBP8.88□□□□□ -0.99
HERC1-208ENST00000560462 UNC93B1Q9H1C4 597 aa8.88□□□□□ -0.99
HERC1-208ENST00000560462 DBNDD1Q9H9R9 158 aa8.88□□□□□ -0.99
HERC1-208ENST00000560462 RTL9Q8NET4 1388 aa8.87□□□□□ -0.99
HERC1-208ENST00000560462 CFAP54Q96N23 3096 aa8.87□□□□□ -0.99
HERC1-208ENST00000560462 GPR37L1O60883 481 aa8.87□□□□□ -0.99
HERC1-208ENST00000560462 MDM2Q00987 491 aaPredicted RBP8.87□□□□□ -0.99
HERC1-208ENST00000560462 DIS3LQ8TF46 1054 aaKnown RBP8.87□□□□□ -0.99
HERC1-208ENST00000560462 LGR6Q9HBX8 967 aa8.87□□□□□ -0.99
HERC1-208ENST00000560462 GPHNQ9NQX3 736 aaPredicted RBP8.87□□□□□ -0.99
HERC1-208ENST00000560462 KCNQ5Q9NR82 932 aa8.87□□□□□ -0.99
HERC1-208ENST00000560462 SRRDQ9UH36 339 aa8.87□□□□□ -0.99
HERC1-208ENST00000560462 ST18O60284 1047 aa8.86□□□□□ -0.99
HERC1-208ENST00000560462 WASHC4Q2M389 1173 aa8.86□□□□□ -0.99
HERC1-208ENST00000560462 PPP1R15BQ5SWA1 713 aa8.86□□□□□ -0.99
HERC1-208ENST00000560462 SP8Q8IXZ3 490 aa8.86□□□□□ -0.99
HERC1-208ENST00000560462 CLMNQ96JQ2 1002 aa8.86□□□□□ -0.99
HERC1-208ENST00000560462 DEFB118Q96PH6 123 aa8.86□□□□□ -0.99
HERC1-208ENST00000560462 MYOZ2Q9NPC6 264 aa8.86□□□□□ -0.99
HERC1-208ENST00000560462 LAMB1P07942 1786 aa8.86□□□□□ -0.99
HERC1-208ENST00000560462 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
HERC1-208ENST00000560462 ECE2O60344 883 aa8.85□□□□□ -0.99
HERC1-208ENST00000560462 WDHD1O75717 1129 aaPredicted RBP8.85□□□□□ -0.99
HERC1-208ENST00000560462 VIL1P09327 827 aaKnown RBP8.85□□□□□ -0.99
HERC1-208ENST00000560462 HOXD10P28358 340 aa8.85□□□□□ -0.99
HERC1-208ENST00000560462 PDIA6Q15084 440 aa8.85□□□□□ -0.99
HERC1-208ENST00000560462 UBR2Q8IWV8 1755 aa8.85□□□□□ -0.99
HERC1-208ENST00000560462 ZSWIM8A7E2V4 1837 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 FAM86C2PA6NEL3 165 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 SMIM22K7EJ46 135 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 RNMTO43148 476 aaKnown RBP8.84□□□□□ -0.99
HERC1-208ENST00000560462 BBOX1O75936 387 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 KRT37O76014 449 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 TAF1P21675 1872 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 GJA5P36382 358 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 PPM1EQ8WY54 764 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 C11orf16Q9NQ32 467 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 FZD1Q9UP38 647 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 CHD8Q9HCK8 2581 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 ZDBF2Q9HCK1 2354 aa8.84□□□□□ -0.99
HERC1-208ENST00000560462 ABCC4O15439 1325 aa8.83□□□□□ -1
HERC1-208ENST00000560462 TLR2O60603 784 aa8.83□□□□□ -1
HERC1-208ENST00000560462 USP17L8P0C7I0 530 aa8.83□□□□□ -1
HERC1-208ENST00000560462 OSBPP22059 807 aa8.83□□□□□ -1
HERC1-208ENST00000560462 PIP4K2AP48426 406 aaPredicted RBP8.83□□□□□ -1
HERC1-208ENST00000560462 MAP3K11Q16584 847 aa8.83□□□□□ -1
HERC1-208ENST00000560462 SLAIN1Q8ND83 568 aa8.83□□□□□ -1
HERC1-208ENST00000560462 AGBL3Q8NEM8 1001 aa8.83□□□□□ -1
HERC1-208ENST00000560462 NBPF3Q9H094 633 aa8.83□□□□□ -1
HERC1-208ENST00000560462 CACNA1BQ00975 2339 aa8.83□□□□□ -1
HERC1-208ENST00000560462 WDFY4Q6ZS81 3184 aa8.83□□□□□ -1
HERC1-208ENST00000560462 MYPNQ86TC9 1320 aa8.82□□□□□ -1
HERC1-208ENST00000560462 C5orf42Q9H799 3197 aa8.82□□□□□ -1
HERC1-208ENST00000560462 UNCXA6NJT0 531 aa8.82□□□□□ -1
HERC1-208ENST00000560462 NBPF26B4DH59 902 aa8.82□□□□□ -1
HERC1-208ENST00000560462 RIMBP2O15034 1052 aa8.82□□□□□ -1
HERC1-208ENST00000560462 PSMC4P43686 418 aa8.82□□□□□ -1
HERC1-208ENST00000560462 SMAD3P84022 425 aaKnown RBP8.82□□□□□ -1
HERC1-208ENST00000560462 DOK7Q18PE1 504 aa8.82□□□□□ -1
HERC1-208ENST00000560462 NBPF9Q3BBW0 867 aa8.82□□□□□ -1
HERC1-208ENST00000560462 C3orf67Q6ZVT6 689 aa8.82□□□□□ -1
HERC1-208ENST00000560462 ANKLE1Q8NAG6 615 aa8.82□□□□□ -1
HERC1-208ENST00000560462 HELBQ8NG08 1087 aaPredicted RBP8.82□□□□□ -1
HERC1-208ENST00000560462 LBHD1Q9BQE6 289 aaPredicted RBP8.82□□□□□ -1
HERC1-208ENST00000560462 DUOX1Q9NRD9 1551 aa8.82□□□□□ -1
HERC1-208ENST00000560462 ADGRA2Q96PE1 1338 aa8.81□□□□□ -1
HERC1-208ENST00000560462 XIRP2A4UGR9 3374 aa8.81□□□□□ -1
HERC1-208ENST00000560462 USP34Q70CQ2 3546 aa8.81□□□□□ -1
HERC1-208ENST00000560462 PPP1R12BO60237 982 aaPredicted RBP8.81□□□□□ -1
HERC1-208ENST00000560462 FMNL1O95466 1100 aaPredicted RBP8.81□□□□□ -1
HERC1-208ENST00000560462 HLFQ16534 295 aa8.81□□□□□ -1
HERC1-208ENST00000560462 RSBN1LQ6PCB5 846 aaPredicted RBP8.81□□□□□ -1
HERC1-208ENST00000560462 AEBP1Q8IUX7 1158 aa8.81□□□□□ -1
HERC1-208ENST00000560462 BRI3BPQ8WY22 251 aa8.81□□□□□ -1
HERC1-208ENST00000560462 NLRP3Q96P20 1036 aa8.81□□□□□ -1
HERC1-208ENST00000560462 C11orf49Q9H6J7 331 aa8.81□□□□□ -1
HERC1-208ENST00000560462 PAK6Q9NQU5 681 aaPredicted RBP8.81□□□□□ -1
HERC1-208ENST00000560462 POLKQ9UBT6 870 aa8.81□□□□□ -1
HERC1-208ENST00000560462 KIF20BQ96Q89 1820 aa8.81□□□□□ -1
HERC1-208ENST00000560462 CCL15-CCL14A0A0B4J2E2 113 aa8.8□□□□□ -1
HERC1-208ENST00000560462 BMP1P13497 986 aa8.8□□□□□ -1
HERC1-208ENST00000560462 CTGFP29279 349 aa8.8□□□□□ -1
HERC1-208ENST00000560462 GRIN2CQ14957 1233 aa8.8□□□□□ -1
HERC1-208ENST00000560462 CCL15Q16663 113 aa8.8□□□□□ -1
HERC1-208ENST00000560462 ZNF790Q6PG37 636 aa8.8□□□□□ -1
HERC1-208ENST00000560462 FAM43AQ8N2R8 423 aa8.8□□□□□ -1
HERC1-208ENST00000560462 DDRGK1Q96HY6 314 aa8.8□□□□□ -1
HERC1-208ENST00000560462 PODXL2Q9NZ53 605 aa8.8□□□□□ -1
HERC1-208ENST00000560462 IBTKQ9P2D0 1353 aaPredicted RBP8.8□□□□□ -1
HERC1-208ENST00000560462 ZFHX4Q86UP3 3567 aa8.79□□□□□ -1
HERC1-208ENST00000560462 PRR33A8MZF0 331 aa8.79□□□□□ -1
HERC1-208ENST00000560462 C6orf229H3BNL8 230 aa8.79□□□□□ -1
HERC1-208ENST00000560462 DPYSL4O14531 572 aa8.79□□□□□ -1
HERC1-208ENST00000560462 GPR37O15354 613 aa8.79□□□□□ -1
HERC1-208ENST00000560462 INHAP05111 366 aa8.79□□□□□ -1
HERC1-208ENST00000560462 PRKCZQ05513 592 aa8.79□□□□□ -1
HERC1-208ENST00000560462 POTEEQ6S8J3 1075 aa8.79□□□□□ -1
HERC1-208ENST00000560462 APOBEC3FQ8IUX4 373 aaKnown RBP8.79□□□□□ -1
HERC1-208ENST00000560462 FBXL18Q96ME1 805 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms