RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GCOM1H8Y6P7 765 aaPredicted RBP15.31■□□□□ 0.04
TRAF3-208ENST00000560371 MYZAPP0CAP1 466 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 DNMT1P26358 1616 aaKnown RBP15.31■□□□□ 0.04
TRAF3-208ENST00000560371 TIMM10P62072 90 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 BCCIPQ9P287 314 aaKnown RBP eCLIP15.31■□□□□ 0.04
TRAF3-208ENST00000560371 LMAN1P49257 510 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 LARGE2Q8N3Y3 721 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 UBASH3AP57075 661 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 DPP8Q6V1X1 898 aaPredicted RBP15.31■□□□□ 0.04
TRAF3-208ENST00000560371 DTHD1Q6ZMT9 781 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 A0A1B0GUL7 405 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 SP4Q02446 784 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 CARD14Q9BXL6 1004 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 ARHGEF10LQ9HCE6 1279 aa15.31■□□□□ 0.04
TRAF3-208ENST00000560371 APBA3O96018 575 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 HS2ST1Q7LGA3 356 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 ZNF354CQ86Y25 554 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 METTL22Q9BUU2 404 aaPredicted RBP15.3■□□□□ 0.04
TRAF3-208ENST00000560371 TMOD4Q9NZQ9 345 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 SAP30BPQ9UHR5 308 aaKnown RBP15.3■□□□□ 0.04
TRAF3-208ENST00000560371 ZBTB21Q9ULJ3 1066 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 FAM13AO94988 1023 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 WDR66Q8TBY9 1149 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 CTAGE1Q96RT6 745 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 JADE2Q9NQC1 790 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 CFAP74Q9C0B2 1584 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 PARP1P09874 1014 aaKnown RBP15.3■□□□□ 0.04
TRAF3-208ENST00000560371 SHANK2Q9UPX8 1470 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 CCDC171Q6TFL3 1326 aa15.3■□□□□ 0.04
TRAF3-208ENST00000560371 GOLGA6L9A6NEM1 432 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 LRSAM1Q6UWE0 723 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 DHX32Q7L7V1 743 aaKnown RBP15.29■□□□□ 0.04
TRAF3-208ENST00000560371 DCTPP1Q9H773 170 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 PABPN1LA6NDY0 278 aaKnown RBP15.29■□□□□ 0.04
TRAF3-208ENST00000560371 A1BGP04217 495 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 DDX17Q92841 729 aaKnown RBP15.29■□□□□ 0.04
TRAF3-208ENST00000560371 KIF4AO95239 1232 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 MCM7P33993 719 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 TMX1Q9H3N1 280 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 ADGBQ8N7X0 1667 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 MBD4O95243 580 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 CREB3L3Q68CJ9 461 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 LRRC45Q96CN5 670 aa15.29■□□□□ 0.04
TRAF3-208ENST00000560371 COL17A1Q9UMD9 1497 aaPredicted RBP15.28■□□□□ 0.04
TRAF3-208ENST00000560371 SLC52A2Q9HAB3 445 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 RBM28Q9NW13 759 aaKnown RBP15.28■□□□□ 0.04
TRAF3-208ENST00000560371 MAST3O60307 1309 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 FSD2A1L4K1 749 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 TESK2Q96S53 571 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 PARD3Q8TEW0 1356 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 GIMAP6Q6P9H5 292 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 BEGAINQ9BUH8 593 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 ADCY5O95622 1261 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 MRPS27Q92552 414 aaKnown RBP15.28■□□□□ 0.04
TRAF3-208ENST00000560371 HOOK2Q96ED9 719 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 C16orf45Q96MC5 204 aaPredicted RBP15.28■□□□□ 0.04
TRAF3-208ENST00000560371 BABAM1Q9NWV8 329 aa15.28■□□□□ 0.04
TRAF3-208ENST00000560371 ZKSCAN3Q9BRR0 538 aa15.27■□□□□ 0.04
TRAF3-208ENST00000560371 BAG6P46379 1132 aa15.27■□□□□ 0.04
TRAF3-208ENST00000560371 CERS3Q8IU89 383 aa15.27■□□□□ 0.04
TRAF3-208ENST00000560371 APOBRQ0VD83 1088 aa15.27■□□□□ 0.04
TRAF3-208ENST00000560371 GOLGA6L10A0A0M3HER8 536 aa15.27■□□□□ 0.04
TRAF3-208ENST00000560371 EYA2O00167 538 aa15.27■□□□□ 0.04
TRAF3-208ENST00000560371 HSP90AA4PQ58FG1 418 aa15.27■□□□□ 0.04
TRAF3-208ENST00000560371 DHX58Q96C10 678 aa15.27■□□□□ 0.04
TRAF3-208ENST00000560371 SSX2IPQ9Y2D8 614 aa15.27■□□□□ 0.04
TRAF3-208ENST00000560371 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.27■□□□□ 0.043e-7■■■□□ 14.7
TRAF3-208ENST00000560371 ALDH1B1P30837 517 aa15.27■□□□□ 0.03
TRAF3-208ENST00000560371 SPAG1Q07617 926 aa15.27■□□□□ 0.03
TRAF3-208ENST00000560371 DPH6Q7L8W6 267 aa15.27■□□□□ 0.03
TRAF3-208ENST00000560371 CEP83Q9Y592 693 aa15.27■□□□□ 0.03
TRAF3-208ENST00000560371 IVNS1ABPQ9Y6Y0 642 aa15.27■□□□□ 0.03
TRAF3-208ENST00000560371 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.03
TRAF3-208ENST00000560371 HOMER2Q9NSB8 354 aa15.27■□□□□ 0.03
TRAF3-208ENST00000560371 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.03
TRAF3-208ENST00000560371 MRVI1Q9Y6F6 885 aa15.27■□□□□ 0.03
TRAF3-208ENST00000560371 KDM5AP29375 1690 aaKnown RBP15.27■□□□□ 0.03
TRAF3-208ENST00000560371 SPTLC2O15270 562 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 BRDTQ58F21 947 aaPredicted RBP15.26■□□□□ 0.03
TRAF3-208ENST00000560371 EHBP1Q8NDI1 1231 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 STAMBPO95630 424 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 TAF12Q16514 161 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 KIAA0753Q2KHM9 967 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 TTC12Q9H892 705 aaPredicted RBP15.26■□□□□ 0.03
TRAF3-208ENST00000560371 IKBKGQ9Y6K9 419 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 RXRAP19793 462 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 CYLC1P35663 651 aaPredicted RBP15.26■□□□□ 0.03
TRAF3-208ENST00000560371 GPCPD1Q9NPB8 672 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 ARHGEF12Q9NZN5 1544 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 SUPT20HQ8NEM7 779 aa15.26■□□□□ 0.03
TRAF3-208ENST00000560371 GPHNQ9NQX3 736 aaPredicted RBP15.25■□□□□ 0.03
TRAF3-208ENST00000560371 NOD1Q9Y239 953 aa15.25■□□□□ 0.03
TRAF3-208ENST00000560371 PDE6BP35913 854 aa15.25■□□□□ 0.03
TRAF3-208ENST00000560371 UBE4AQ14139 1066 aa15.25■□□□□ 0.03
TRAF3-208ENST00000560371 CNPY2Q9Y2B0 182 aa15.25■□□□□ 0.03
TRAF3-208ENST00000560371 PDCL2Q8N4E4 241 aa15.25■□□□□ 0.03
TRAF3-208ENST00000560371 PIK3C2GO75747 1445 aa15.25■□□□□ 0.03
TRAF3-208ENST00000560371 HOXB7P09629 217 aa15.25■□□□□ 0.03
TRAF3-208ENST00000560371 HELLSQ9NRZ9 838 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms