RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 CFAP53Q96M91 514 aa13.42□□□□□ -0.26
PDE8A-212ENST00000560333 GPSM3Q9Y4H4 160 aa13.42□□□□□ -0.26
PDE8A-212ENST00000560333 PPM1GO15355 546 aaPredicted RBP13.41□□□□□ -0.26
PDE8A-212ENST00000560333 VSIG8P0DPA2 414 aa13.41□□□□□ -0.26
PDE8A-212ENST00000560333 DHX9Q08211 1270 aaKnown RBP13.41□□□□□ -0.26
PDE8A-212ENST00000560333 PNMA1Q8ND90 353 aa13.41□□□□□ -0.26
PDE8A-212ENST00000560333 YTHDC1Q96MU7 727 aaKnown RBP13.41□□□□□ -0.26
PDE8A-212ENST00000560333 PLEKHF1Q96S99 279 aa13.41□□□□□ -0.26
PDE8A-212ENST00000560333 FAM208AQ9UK61 1670 aaKnown RBP13.4□□□□□ -0.26
PDE8A-212ENST00000560333 PPFIA3O75145 1194 aa13.4□□□□□ -0.26
PDE8A-212ENST00000560333 LORP23490 312 aaPredicted RBP13.4□□□□□ -0.26
PDE8A-212ENST00000560333 DEFB115Q30KQ5 88 aa13.4□□□□□ -0.26
PDE8A-212ENST00000560333 DNMT3LQ9UJW3 386 aa13.4□□□□□ -0.26
PDE8A-212ENST00000560333 RASSF10A6NK89 507 aa13.39□□□□□ -0.27
PDE8A-212ENST00000560333 CBLBQ13191 982 aa13.39□□□□□ -0.27
PDE8A-212ENST00000560333 Q6ZVU0 165 aa13.39□□□□□ -0.27
PDE8A-212ENST00000560333 NLGN1Q8N2Q7 840 aa13.39□□□□□ -0.27
PDE8A-212ENST00000560333 ABT1Q9ULW3 272 aaKnown RBP13.39□□□□□ -0.27
PDE8A-212ENST00000560333 LTBP1Q14766 1721 aa13.39□□□□□ -0.27
PDE8A-212ENST00000560333 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
PDE8A-212ENST00000560333 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
PDE8A-212ENST00000560333 AMPHP49418 695 aa13.38□□□□□ -0.27
PDE8A-212ENST00000560333 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
PDE8A-212ENST00000560333 ADAM32Q8TC27 787 aa13.38□□□□□ -0.27
PDE8A-212ENST00000560333 SMARCC1Q92922 1105 aaPredicted RBP13.38□□□□□ -0.27
PDE8A-212ENST00000560333 TTLL8A6PVC2 850 aa13.37□□□□□ -0.27
PDE8A-212ENST00000560333 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.37□□□□□ -0.27
PDE8A-212ENST00000560333 OCSTAMPQ9BR26 566 aa13.37□□□□□ -0.27
PDE8A-212ENST00000560333 THSD7BQ9C0I4 1608 aa13.37□□□□□ -0.27
PDE8A-212ENST00000560333 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
PDE8A-212ENST00000560333 KDRP35968 1356 aa13.36□□□□□ -0.27
PDE8A-212ENST00000560333 HNRNPUQ00839 825 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDE8A-212ENST00000560333 EPS8L1Q8TE68 723 aa13.36□□□□□ -0.27
PDE8A-212ENST00000560333 NUDCQ9Y266 331 aa13.36□□□□□ -0.27
PDE8A-212ENST00000560333 CASP8AP2Q9UKL3 1982 aa13.36□□□□□ -0.27
PDE8A-212ENST00000560333 LOC102724428A0A0B4J2F2 783 aa13.35□□□□□ -0.27
PDE8A-212ENST00000560333 DLL1O00548 723 aa13.35□□□□□ -0.27
PDE8A-212ENST00000560333 USP17L8P0C7I0 530 aa13.35□□□□□ -0.27
PDE8A-212ENST00000560333 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
PDE8A-212ENST00000560333 SIK1P57059 783 aa13.35□□□□□ -0.27
PDE8A-212ENST00000560333 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDE8A-212ENST00000560333 ITPK1Q13572 414 aa13.35□□□□□ -0.27
PDE8A-212ENST00000560333 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
PDE8A-212ENST00000560333 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
PDE8A-212ENST00000560333 LDHDQ86WU2 507 aa13.35□□□□□ -0.27
PDE8A-212ENST00000560333 AEBP1Q8IUX7 1158 aa13.35□□□□□ -0.27
PDE8A-212ENST00000560333 CCDC146Q8IYE0 955 aa13.35□□□□□ -0.27
PDE8A-212ENST00000560333 RUNDC1Q96C34 613 aa13.35□□□□□ -0.27
PDE8A-212ENST00000560333 U2SURPO15042 1029 aaKnown RBP13.34□□□□□ -0.27
PDE8A-212ENST00000560333 SPINT1O43278 529 aa13.34□□□□□ -0.27
PDE8A-212ENST00000560333 GYS1P13807 737 aa13.34□□□□□ -0.27
PDE8A-212ENST00000560333 HABP4Q5JVS0 413 aaKnown RBP13.34□□□□□ -0.27
PDE8A-212ENST00000560333 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
PDE8A-212ENST00000560333 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
PDE8A-212ENST00000560333 GCC1Q96CN9 775 aa13.34□□□□□ -0.27
PDE8A-212ENST00000560333 ZBED9Q6R2W3 1325 aa13.34□□□□□ -0.27
PDE8A-212ENST00000560333 ZNF521Q96K83 1311 aa13.34□□□□□ -0.27
PDE8A-212ENST00000560333 ITGB4P16144 1822 aa13.34□□□□□ -0.27
PDE8A-212ENST00000560333 FIGNL2A6NMB9 653 aa13.33□□□□□ -0.28
PDE8A-212ENST00000560333 NFKBIEO00221 500 aa13.33□□□□□ -0.28
PDE8A-212ENST00000560333 APAF1O14727 1248 aa13.33□□□□□ -0.28
PDE8A-212ENST00000560333 DDNO94850 711 aaPredicted RBP13.33□□□□□ -0.28
PDE8A-212ENST00000560333 HMOX1P09601 288 aa13.33□□□□□ -0.28
PDE8A-212ENST00000560333 RFC5P40937 340 aa13.33□□□□□ -0.28
PDE8A-212ENST00000560333 NBPF6Q5VWK0 638 aa13.33□□□□□ -0.28
PDE8A-212ENST00000560333 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.28
PDE8A-212ENST00000560333 CAPNS2Q96L46 248 aa13.33□□□□□ -0.28
PDE8A-212ENST00000560333 NBPF4Q96M43 638 aa13.33□□□□□ -0.28
PDE8A-212ENST00000560333 HMX1Q9NP08 348 aaPredicted RBP13.33□□□□□ -0.28
PDE8A-212ENST00000560333 RTCBQ9Y3I0 505 aaKnown RBP13.33□□□□□ -0.28
PDE8A-212ENST00000560333 NBPF20Q3BBV1 942 aa13.32□□□□□ -0.28
PDE8A-212ENST00000560333 CYP4F22Q6NT55 531 aa13.32□□□□□ -0.28
PDE8A-212ENST00000560333 RFC4P35249 363 aa13.31□□□□□ -0.28
PDE8A-212ENST00000560333 SULT6B1Q6IMI4 303 aa13.31□□□□□ -0.28
PDE8A-212ENST00000560333 PIGBQ92521 554 aa13.31□□□□□ -0.28
PDE8A-212ENST00000560333 GPR101Q96P66 508 aaPredicted RBP13.31□□□□□ -0.28
PDE8A-212ENST00000560333 GOPCQ9HD26 462 aa13.31□□□□□ -0.28
PDE8A-212ENST00000560333 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
PDE8A-212ENST00000560333 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
PDE8A-212ENST00000560333 PRKAR2BP31323 418 aa13.3□□□□□ -0.28
PDE8A-212ENST00000560333 PTSQ03393 145 aa13.3□□□□□ -0.28
PDE8A-212ENST00000560333 DDR1Q08345 913 aa13.3□□□□□ -0.28
PDE8A-212ENST00000560333 DZIP3Q86Y13 1208 aaKnown RBP13.3□□□□□ -0.28
PDE8A-212ENST00000560333 PCMTD1Q96MG8 357 aaPredicted RBP13.3□□□□□ -0.28
PDE8A-212ENST00000560333 AOC2O75106 756 aa13.29□□□□□ -0.28
PDE8A-212ENST00000560333 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
PDE8A-212ENST00000560333 AGBL1Q96MI9 1066 aa13.29□□□□□ -0.28
PDE8A-212ENST00000560333 IQCA1LA6NCM1 817 aa13.28□□□□□ -0.28
PDE8A-212ENST00000560333 ECE1P42892 770 aa13.28□□□□□ -0.28
PDE8A-212ENST00000560333 RELBQ01201 579 aa13.28□□□□□ -0.28
PDE8A-212ENST00000560333 TMEM259Q4ZIN3 620 aa13.28□□□□□ -0.28
PDE8A-212ENST00000560333 MAP1SQ66K74 1059 aaPredicted RBP13.28□□□□□ -0.28
PDE8A-212ENST00000560333 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
PDE8A-212ENST00000560333 TAF1DQ9H5J8 278 aaPredicted RBP13.28□□□□□ -0.28
PDE8A-212ENST00000560333 CCDC27Q2M243 656 aa13.27□□□□□ -0.29
PDE8A-212ENST00000560333 NGEFQ8N5V2 710 aa13.27□□□□□ -0.29
PDE8A-212ENST00000560333 NBPF15Q8N660 670 aa13.27□□□□□ -0.29
PDE8A-212ENST00000560333 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.29
PDE8A-212ENST00000560333 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
PDE8A-212ENST00000560333 RAB15P59190 212 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms