RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 HMOX1P09601 288 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 EVA1CP58658 441 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 SLFN5Q08AF3 891 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 CHRNA2Q15822 529 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 NEDD1Q8NHV4 660 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 ANKRD24Q8TF21 1146 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 INSM2Q96T92 566 aaPredicted RBP8.05□□□□□ -1.12
CLPX-206ENST00000560166 MBIPQ9NS73 344 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 LRRC4BQ9NT99 713 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 CUEDC1Q9NWM3 386 aaPredicted RBP8.05□□□□□ -1.12
CLPX-206ENST00000560166 COL18A1P39060 1754 aa8.05□□□□□ -1.12
CLPX-206ENST00000560166 PALM3A6NDB9 673 aaPredicted RBP8.04□□□□□ -1.12
CLPX-206ENST00000560166 CT47B1P0C2W7 299 aaPredicted RBP8.04□□□□□ -1.12
CLPX-206ENST00000560166 LMOD1P29536 600 aaPredicted RBP8.04□□□□□ -1.12
CLPX-206ENST00000560166 RIPK4P57078 832 aa8.04□□□□□ -1.12
CLPX-206ENST00000560166 ZC3H6P61129 1189 aaKnown RBP8.04□□□□□ -1.12
CLPX-206ENST00000560166 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
CLPX-206ENST00000560166 AMOTQ4VCS5 1084 aa8.04□□□□□ -1.12
CLPX-206ENST00000560166 DUSP27Q5VZP5 1158 aa8.04□□□□□ -1.12
CLPX-206ENST00000560166 PHACTR3Q96KR7 559 aa8.04□□□□□ -1.12
CLPX-206ENST00000560166 MYH16Q9H6N6 1097 aa8.04□□□□□ -1.12
CLPX-206ENST00000560166 COL5A2P05997 1499 aaPredicted RBP8.04□□□□□ -1.12
CLPX-206ENST00000560166 WDR17Q8IZU2 1322 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 OVOS2A0A0G2JMS6 1433 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 FURINP09958 794 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 PDE4CQ08493 712 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 NBPF6Q5VWK0 638 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 NBPF4Q96M43 638 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 AGBL1Q96MI9 1066 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 UCN2Q96RP3 112 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 STK32BQ9NY57 414 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 TFIP11Q9UBB9 837 aaKnown RBP8.03□□□□□ -1.12
CLPX-206ENST00000560166 RNF123Q5XPI4 1314 aa8.03□□□□□ -1.12
CLPX-206ENST00000560166 KRBA1A5PL33 1030 aa8.02□□□□□ -1.13
CLPX-206ENST00000560166 CSB-PGBD3P0DP91 1061 aa8.02□□□□□ -1.13
CLPX-206ENST00000560166 SOX11P35716 441 aa8.02□□□□□ -1.13
CLPX-206ENST00000560166 PNMA1Q8ND90 353 aa8.02□□□□□ -1.13
CLPX-206ENST00000560166 GMCL1Q96IK5 515 aa8.02□□□□□ -1.13
CLPX-206ENST00000560166 IFT57Q9NWB7 429 aa8.02□□□□□ -1.13
CLPX-206ENST00000560166 BABAM1Q9NWV8 329 aa8.02□□□□□ -1.13
CLPX-206ENST00000560166 CASZ1Q86V15 1759 aa8.02□□□□□ -1.13
CLPX-206ENST00000560166 MAP3K5Q99683 1374 aa8.01□□□□□ -1.13
CLPX-206ENST00000560166 ZNF853P0CG23 659 aa8.01□□□□□ -1.13
CLPX-206ENST00000560166 GNAI1P63096 354 aa8.01□□□□□ -1.13
CLPX-206ENST00000560166 RELBQ01201 579 aa8.01□□□□□ -1.13
CLPX-206ENST00000560166 ERFEQ4G0M1 354 aa8.01□□□□□ -1.13
CLPX-206ENST00000560166 PLEKHO1Q53GL0 409 aaPredicted RBP8.01□□□□□ -1.13
CLPX-206ENST00000560166 RAPGEF4Q8WZA2 1011 aa8.01□□□□□ -1.13
CLPX-206ENST00000560166 ACDQ96AP0 544 aa8.01□□□□□ -1.13
CLPX-206ENST00000560166 ZNF428Q96B54 188 aa8.01□□□□□ -1.13
CLPX-206ENST00000560166 LTV1Q96GA3 475 aaPredicted RBP8.01□□□□□ -1.13
CLPX-206ENST00000560166 CARD10Q9BWT7 1032 aa8.01□□□□□ -1.13
CLPX-206ENST00000560166 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
CLPX-206ENST00000560166 RRP7AQ9Y3A4 280 aaKnown RBP8.01□□□□□ -1.13
CLPX-206ENST00000560166 CEMIPQ8WUJ3 1361 aa8□□□□□ -1.13
CLPX-206ENST00000560166 MAGEB6P1A0A0J9YX57 407 aa8□□□□□ -1.13
CLPX-206ENST00000560166 CARNS1A5YM72 827 aa8□□□□□ -1.13
CLPX-206ENST00000560166 GNAT3A8MTJ3 354 aa8□□□□□ -1.13
CLPX-206ENST00000560166 PLSCR1O15162 318 aa8□□□□□ -1.13
CLPX-206ENST00000560166 MTHFSDQ2M296 383 aaKnown RBP8□□□□□ -1.13
CLPX-206ENST00000560166 LCE3BQ5TA77 95 aa8□□□□□ -1.13
CLPX-206ENST00000560166 ERICH6BQ5W0A0 696 aa8□□□□□ -1.13
CLPX-206ENST00000560166 RTF1Q92541 710 aaKnown RBP8□□□□□ -1.13
CLPX-206ENST00000560166 MTFR1LQ9H019 292 aa8□□□□□ -1.13
CLPX-206ENST00000560166 GZF1Q9H116 711 aaPredicted RBP8□□□□□ -1.13
CLPX-206ENST00000560166 NLRP2Q9NX02 1062 aa8□□□□□ -1.13
CLPX-206ENST00000560166 RCAN3Q9UKA8 241 aa8□□□□□ -1.13
CLPX-206ENST00000560166 CRB1P82279 1406 aa8□□□□□ -1.13
CLPX-206ENST00000560166 SOS1Q07889 1333 aaPredicted RBP8□□□□□ -1.13
CLPX-206ENST00000560166 HSPA6P17066 643 aa7.99□□□□□ -1.13
CLPX-206ENST00000560166 TATP17735 454 aaPredicted RBP7.99□□□□□ -1.13
CLPX-206ENST00000560166 DHX9Q08211 1270 aaKnown RBP7.99□□□□□ -1.13
CLPX-206ENST00000560166 AKAP4Q5JQC9 854 aa7.99□□□□□ -1.13
CLPX-206ENST00000560166 LARP1Q6PKG0 1096 aaKnown RBP7.99□□□□□ -1.13
CLPX-206ENST00000560166 ALYREFQ86V81 257 aaKnown RBP7.99□□□□□ -1.13
CLPX-206ENST00000560166 KRTAP4-12Q9BQ66 201 aa7.99□□□□□ -1.13
CLPX-206ENST00000560166 CDCA7Q9BWT1 371 aaPredicted RBP7.99□□□□□ -1.13
CLPX-206ENST00000560166 SPG7Q9UQ90 795 aa7.99□□□□□ -1.13
CLPX-206ENST00000560166 LRRC37A3O60309 1634 aa7.99□□□□□ -1.13
CLPX-206ENST00000560166 FANCIQ9NVI1 1328 aa7.99□□□□□ -1.13
CLPX-206ENST00000560166 NEFLP07196 543 aa7.98□□□□□ -1.13
CLPX-206ENST00000560166 HSP90AB1P08238 724 aaKnown RBP7.98□□□□□ -1.13
CLPX-206ENST00000560166 NR1H3Q13133 447 aa7.98□□□□□ -1.13
CLPX-206ENST00000560166 SLC15A2Q16348 729 aa7.98□□□□□ -1.13
CLPX-206ENST00000560166 TBC1D9Q6ZT07 1266 aa7.98□□□□□ -1.13
CLPX-206ENST00000560166 TRIM22Q8IYM9 498 aa7.98□□□□□ -1.13
CLPX-206ENST00000560166 ZNF526Q8TF50 670 aaPredicted RBP7.98□□□□□ -1.13
CLPX-206ENST00000560166 USTQ9Y2C2 406 aa7.98□□□□□ -1.13
CLPX-206ENST00000560166 MAFBQ9Y5Q3 323 aaPredicted RBP7.98□□□□□ -1.13
CLPX-206ENST00000560166 MEGF6O75095 1541 aa7.98□□□□□ -1.13
CLPX-206ENST00000560166 UTRNP46939 3433 aa7.97□□□□□ -1.13
CLPX-206ENST00000560166 CHL1O00533 1208 aa7.97□□□□□ -1.13
CLPX-206ENST00000560166 FBXO45P0C2W1 286 aa7.97□□□□□ -1.13
CLPX-206ENST00000560166 C1orf141Q5JVX7 400 aa7.97□□□□□ -1.13
CLPX-206ENST00000560166 TMCO4Q5TGY1 634 aa7.97□□□□□ -1.13
CLPX-206ENST00000560166 FOXD4L5Q5VV16 416 aaPredicted RBP7.97□□□□□ -1.13
CLPX-206ENST00000560166 ZNF530Q6P9A1 599 aaPredicted RBP7.97□□□□□ -1.13
CLPX-206ENST00000560166 TOM1L2Q6ZVM7 507 aa7.97□□□□□ -1.13
CLPX-206ENST00000560166 USHBP1Q8N6Y0 703 aa7.97□□□□□ -1.13
CLPX-206ENST00000560166 GPKOWQ92917 476 aaPredicted RBP eCLIP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms