RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 CNTROBQ8N137 903 aa16.91■□□□□ 0.3
CHRNB4-204ENST00000559849 TRPM4Q8TD43 1214 aa16.91■□□□□ 0.3
CHRNB4-204ENST00000559849 PGAP2Q9UHJ9 254 aa16.91■□□□□ 0.3
CHRNB4-204ENST00000559849 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
CHRNB4-204ENST00000559849 ZNF646O15015 1829 aaPredicted RBP16.91■□□□□ 0.3
CHRNB4-204ENST00000559849 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
CHRNB4-204ENST00000559849 ITGBL1O95965 494 aaPredicted RBP16.9■□□□□ 0.3
CHRNB4-204ENST00000559849 TIMM10P62072 90 aa16.9■□□□□ 0.3
CHRNB4-204ENST00000559849 OS9Q13438 667 aaPredicted RBP16.9■□□□□ 0.3
CHRNB4-204ENST00000559849 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
CHRNB4-204ENST00000559849 CEP350Q5VT06 3117 aa16.9■□□□□ 0.3
CHRNB4-204ENST00000559849 EGFRP00533 1210 aa16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 KIAA0825Q8IV33 1275 aa16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 MYOZ2Q9NPC6 264 aa16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 GNL3LQ9NVN8 582 aaKnown RBP16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 A0A1B0GUL7 405 aa16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 HMMRO75330 724 aa16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 CERS5Q8N5B7 392 aa16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 JAG2Q9Y219 1238 aa16.89■□□□□ 0.29
CHRNB4-204ENST00000559849 APLP1P51693 650 aa16.88■□□□□ 0.29
CHRNB4-204ENST00000559849 MFSD14BQ5SR56 506 aa16.88■□□□□ 0.29
CHRNB4-204ENST00000559849 NEUROD6Q96NK8 337 aa16.88■□□□□ 0.29
CHRNB4-204ENST00000559849 TBC1D22AQ8WUA7 517 aa16.87■□□□□ 0.29
CHRNB4-204ENST00000559849 GPR108Q9NPR9 543 aa16.87■□□□□ 0.29
CHRNB4-204ENST00000559849 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.87■□□□□ 0.29
CHRNB4-204ENST00000559849 HSP90AB4PQ58FF6 505 aa16.87■□□□□ 0.29
CHRNB4-204ENST00000559849 SIRT2Q8IXJ6 389 aa16.87■□□□□ 0.29
CHRNB4-204ENST00000559849 XAGE2Q96GT9 111 aa16.87■□□□□ 0.29
CHRNB4-204ENST00000559849 POLR2AP24928 1970 aaKnown RBP16.87■□□□□ 0.29
CHRNB4-204ENST00000559849 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
CHRNB4-204ENST00000559849 CHAF1AQ13111 956 aaPredicted RBP16.86■□□□□ 0.29
CHRNB4-204ENST00000559849 CCDC102BQ68D86 513 aa16.86■□□□□ 0.29
CHRNB4-204ENST00000559849 CDC37L1Q7L3B6 337 aa16.86■□□□□ 0.29
CHRNB4-204ENST00000559849 ADORA1P30542 326 aa16.85■□□□□ 0.29
CHRNB4-204ENST00000559849 SCARF1Q14162 830 aa16.85■□□□□ 0.29
CHRNB4-204ENST00000559849 ERC1Q8IUD2 1116 aa16.85■□□□□ 0.29
CHRNB4-204ENST00000559849 DCPSQ96C86 337 aaKnown RBP16.85■□□□□ 0.29
CHRNB4-204ENST00000559849 SEMA3EO15041 775 aa16.85■□□□□ 0.29
CHRNB4-204ENST00000559849 ZBTB22O15209 634 aa16.85■□□□□ 0.29
CHRNB4-204ENST00000559849 PHKA1P46020 1223 aa16.85■□□□□ 0.29
CHRNB4-204ENST00000559849 EXOC6BQ9Y2D4 811 aa16.85■□□□□ 0.29
CHRNB4-204ENST00000559849 F8W031 263 aaPredicted RBP16.84■□□□□ 0.29
CHRNB4-204ENST00000559849 GORABQ5T7V8 394 aa16.84■□□□□ 0.29
CHRNB4-204ENST00000559849 WDR66Q8TBY9 1149 aa16.84■□□□□ 0.29
CHRNB4-204ENST00000559849 DENND2AQ9ULE3 1009 aa16.84■□□□□ 0.29
CHRNB4-204ENST00000559849 MYH13Q9UKX3 1938 aa16.84■□□□□ 0.29
CHRNB4-204ENST00000559849 WNT10BO00744 389 aa16.84■□□□□ 0.29
CHRNB4-204ENST00000559849 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
CHRNB4-204ENST00000559849 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
CHRNB4-204ENST00000559849 ARAP2Q8WZ64 1704 aa16.84■□□□□ 0.29
CHRNB4-204ENST00000559849 DLGAP5Q15398 846 aa16.83■□□□□ 0.28
CHRNB4-204ENST00000559849 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
CHRNB4-204ENST00000559849 MTMR14Q8NCE2 650 aa16.83■□□□□ 0.28
CHRNB4-204ENST00000559849 GLIS2Q9BZE0 524 aaPredicted RBP16.83■□□□□ 0.28
CHRNB4-204ENST00000559849 GGA3Q9NZ52 723 aa16.83■□□□□ 0.28
CHRNB4-204ENST00000559849 TTF2Q9UNY4 1162 aaKnown RBP16.83■□□□□ 0.28
CHRNB4-204ENST00000559849 SUGT1Q9Y2Z0 365 aa16.83■□□□□ 0.28
CHRNB4-204ENST00000559849 ANGEL2Q5VTE6 544 aaKnown RBP16.82■□□□□ 0.28
CHRNB4-204ENST00000559849 KRT26Q7Z3Y9 468 aa16.82■□□□□ 0.28
CHRNB4-204ENST00000559849 SULF1Q8IWU6 871 aa16.82■□□□□ 0.28
CHRNB4-204ENST00000559849 SERPINA10Q9UK55 444 aa16.82■□□□□ 0.28
CHRNB4-204ENST00000559849 PITPNM2Q9BZ72 1349 aa16.82■□□□□ 0.28
CHRNB4-204ENST00000559849 TRAF5O00463 557 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 USP48Q86UV5 1035 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 ZBED3Q96IU2 234 aaPredicted RBP16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 CREBZFQ9NS37 354 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 ASTN2O75129 1339 aaPredicted RBP16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 TMEM88BA6NKF7 163 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 RAB11FIP3O75154 756 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 HDLBPQ00341 1268 aaKnown RBP16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 RASGRF1Q13972 1273 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 CCDC158Q5M9N0 1113 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 CRBNQ96SW2 442 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 MRIQ9BWK5 157 aa16.81■□□□□ 0.28
CHRNB4-204ENST00000559849 HTRA3P83110 453 aa16.8■□□□□ 0.28
CHRNB4-204ENST00000559849 GRIK5Q16478 980 aa16.8■□□□□ 0.28
CHRNB4-204ENST00000559849 KIF1BPQ96EK5 621 aa16.8■□□□□ 0.28
CHRNB4-204ENST00000559849 SUPT16HQ9Y5B9 1047 aaKnown RBP16.8■□□□□ 0.28
CHRNB4-204ENST00000559849 PDS5AQ29RF7 1337 aaKnown RBP16.8■□□□□ 0.28
CHRNB4-204ENST00000559849 SALL1Q9NSC2 1324 aa16.8■□□□□ 0.28
CHRNB4-204ENST00000559849 MYO1BO43795 1136 aa16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 UQCRFS1P1P0C7P4 283 aa16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 EAF2Q96CJ1 260 aaPredicted RBP16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 PRMT6Q96LA8 375 aaPredicted RBP16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 DBNDD2Q9BQY9 259 aa16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 TRPM7Q96QT4 1865 aa16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 MAST3O60307 1309 aa16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 ARID4AP29374 1257 aaPredicted RBP16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 CCDC8Q9H0W5 538 aaPredicted RBP16.79■□□□□ 0.28
CHRNB4-204ENST00000559849 COL1A1P02452 1464 aaPredicted RBP16.78■□□□□ 0.28
CHRNB4-204ENST00000559849 APBB1O00213 710 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms