RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 B4GALNT3Q6L9W6 998 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 DPY19L2Q6NUT2 758 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 ZGPATQ8N5A5 531 aaKnown RBP10.61□□□□□ -0.71
LRRC28-215ENST00000559774 LNPKQ9C0E8 428 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 DBNDD1Q9H9R9 158 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 TLR7Q9NYK1 1049 aaKnown RBP10.61□□□□□ -0.71
LRRC28-215ENST00000559774 CACNA1SQ13698 1873 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 SPEF2Q9C093 1822 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 A0A1B0GUL6 1792 aa10.6□□□□□ -0.71
LRRC28-215ENST00000559774 PDE1AP54750 535 aa10.6□□□□□ -0.71
LRRC28-215ENST00000559774 TTF1Q15361 905 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-215ENST00000559774 TTLL5Q6EMB2 1281 aa10.6□□□□□ -0.71
LRRC28-215ENST00000559774 CIAPIN1Q6FI81 312 aa10.6□□□□□ -0.71
LRRC28-215ENST00000559774 GPC2Q8N158 579 aa10.6□□□□□ -0.71
LRRC28-215ENST00000559774 SPATA5Q8NB90 893 aa10.6□□□□□ -0.71
LRRC28-215ENST00000559774 AGBL3Q8NEM8 1001 aa10.6□□□□□ -0.71
LRRC28-215ENST00000559774 DPF2Q92785 391 aa10.6□□□□□ -0.71
LRRC28-215ENST00000559774 GPR101Q96P66 508 aaPredicted RBP10.6□□□□□ -0.71
LRRC28-215ENST00000559774 ARAP2Q8WZ64 1704 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 YDJCA8MPS7 323 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 CXCL9Q07325 125 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 RASGRF1Q13972 1273 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 DACT2Q5SW24 774 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-215ENST00000559774 PLEKHM2Q8IWE5 1019 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 C16orf71Q8IYS4 520 aaPredicted RBP10.59□□□□□ -0.71
LRRC28-215ENST00000559774 HAUS7Q99871 368 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 MRIQ9BWK5 157 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 HMG20BQ9P0W2 317 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 UTRNP46939 3433 aa10.59□□□□□ -0.71
LRRC28-215ENST00000559774 MCAMP43121 646 aa10.58□□□□□ -0.72
LRRC28-215ENST00000559774 GTF2IP78347 998 aa10.58□□□□□ -0.72
LRRC28-215ENST00000559774 RSBN1LQ6PCB5 846 aaPredicted RBP10.58□□□□□ -0.72
LRRC28-215ENST00000559774 GTF3C3Q9Y5Q9 886 aa10.58□□□□□ -0.72
LRRC28-215ENST00000559774 MAST3O60307 1309 aa10.58□□□□□ -0.72
LRRC28-215ENST00000559774 GLTPD2A6NH11 291 aa10.57□□□□□ -0.72
LRRC28-215ENST00000559774 PSMD14O00487 310 aa10.57□□□□□ -0.72
LRRC28-215ENST00000559774 RAD17O75943 681 aa10.57□□□□□ -0.72
LRRC28-215ENST00000559774 HDLBPQ00341 1268 aaKnown RBP10.57□□□□□ -0.72
LRRC28-215ENST00000559774 LRRFIP1Q32MZ4 808 aaKnown RBP10.57□□□□□ -0.72
LRRC28-215ENST00000559774 MFSD14BQ5SR56 506 aa10.57□□□□□ -0.72
LRRC28-215ENST00000559774 PPP4R3CPQ6ZMV5 832 aa10.57□□□□□ -0.72
LRRC28-215ENST00000559774 PI4K2BQ8TCG2 481 aa10.57□□□□□ -0.72
LRRC28-215ENST00000559774 L3MBTL3Q96JM7 780 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-215ENST00000559774 GMLQ99445 158 aa10.57□□□□□ -0.72
LRRC28-215ENST00000559774 COL4A5P29400 1685 aa10.57□□□□□ -0.72
LRRC28-215ENST00000559774 PDE4AP27815 886 aa10.56□□□□□ -0.72
LRRC28-215ENST00000559774 SLF2Q8IX21 1173 aa10.56□□□□□ -0.72
LRRC28-215ENST00000559774 OTUD7AQ8TE49 926 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-215ENST00000559774 KCNQ5Q9NR82 932 aa10.56□□□□□ -0.72
LRRC28-215ENST00000559774 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
LRRC28-215ENST00000559774 CYP2E1P05181 493 aaPredicted RBP10.55□□□□□ -0.72
LRRC28-215ENST00000559774 LDHBP07195 334 aaKnown RBP10.55□□□□□ -0.72
LRRC28-215ENST00000559774 ZAP70P43403 619 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 MAP3K12Q12852 859 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 CHAF1AQ13111 956 aaPredicted RBP10.55□□□□□ -0.72
LRRC28-215ENST00000559774 SCARF1Q14162 830 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 ZSCAN25Q6NSZ9 544 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 ERICH6Q7L0X2 663 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 CERS3Q8IU89 383 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 OGFOD1Q8N543 542 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 EVI5LQ96CN4 794 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 FAM163AQ96GL9 167 aaPredicted RBP10.55□□□□□ -0.72
LRRC28-215ENST00000559774 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.55□□□□□ -0.72
LRRC28-215ENST00000559774 BOLA2Q9H3K6 86 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 SERPINA10Q9UK55 444 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 HDAC9Q9UKV0 1011 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 IQSEC3Q9UPP2 1182 aaPredicted RBP10.55□□□□□ -0.72
LRRC28-215ENST00000559774 SBF1O95248 1867 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 ZNF541Q9H0D2 1346 aa10.55□□□□□ -0.72
LRRC28-215ENST00000559774 DICER1Q9UPY3 1922 aaKnown RBP10.54□□□□□ -0.72
LRRC28-215ENST00000559774 IQCA1LA6NCM1 817 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 MAP4K4O95819 1239 aaPredicted RBP10.54□□□□□ -0.72
LRRC28-215ENST00000559774 LDHCP07864 332 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 ZFYP08048 801 aaPredicted RBP10.54□□□□□ -0.72
LRRC28-215ENST00000559774 USP17L8P0C7I0 530 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 ZNF280AP59817 542 aaPredicted RBP10.54□□□□□ -0.72
LRRC28-215ENST00000559774 GSTO1P78417 241 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 TTC22Q5TAA0 569 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 HHIPL2Q6UWX4 724 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 CERS5Q8N5B7 392 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 KBTBD3Q8NAB2 608 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 MTMR14Q8NCE2 650 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 BCL11AQ9H165 835 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 LRP2BPQ9P2M1 347 aa10.54□□□□□ -0.72
LRRC28-215ENST00000559774 COL1A1P02452 1464 aaPredicted RBP10.54□□□□□ -0.72
LRRC28-215ENST00000559774 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 H7C1D1 291 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 GOLIM4O00461 696 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 DDNO94850 711 aaPredicted RBP10.53□□□□□ -0.72
LRRC28-215ENST00000559774 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
LRRC28-215ENST00000559774 GMPSP49915 693 aaPredicted RBP10.53□□□□□ -0.72
LRRC28-215ENST00000559774 UBE3CQ15386 1083 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 BMP2KLQ5H9B9 411 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 PI16Q6UXB8 463 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 CNTROBQ8N137 903 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 DNAJC2Q99543 621 aaKnown RBP10.53□□□□□ -0.72
LRRC28-215ENST00000559774 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
LRRC28-215ENST00000559774 GPRC5DQ9NZD1 345 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms