RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 WDR33Q9C0J8 1336 aaKnown RBP12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 KIF13AQ9H1H9 1805 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 PDE8BO95263 885 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 WASF1Q92558 559 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 CCDC129Q6ZRS4 1044 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 GNAT2P19087 354 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 MFSD14BQ5SR56 506 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 SPC24Q8NBT2 197 aa12.41□□□□□ -0.42
CARMIL3-202ENST00000559694 ATP2B4P23634 1241 aa12.4□□□□□ -0.42
CARMIL3-202ENST00000559694 ZNF76P36508 570 aa12.4□□□□□ -0.42
CARMIL3-202ENST00000559694 KBTBD3Q8NAB2 608 aa12.4□□□□□ -0.42
CARMIL3-202ENST00000559694 C3P01024 1663 aa12.4□□□□□ -0.42
CARMIL3-202ENST00000559694 ME1P48163 572 aa12.4□□□□□ -0.42
CARMIL3-202ENST00000559694 WTAPQ15007 396 aa12.4□□□□□ -0.42
CARMIL3-202ENST00000559694 ARMT1Q9H993 441 aa12.4□□□□□ -0.42
CARMIL3-202ENST00000559694 SH2B1Q9NRF2 756 aaPredicted RBP12.4□□□□□ -0.42
CARMIL3-202ENST00000559694 MYO5BQ9ULV0 1848 aa12.4□□□□□ -0.42
CARMIL3-202ENST00000559694 PSDA5PKW4 1024 aaPredicted RBP12.4□□□□□ -0.43
CARMIL3-202ENST00000559694 BBOX1O75936 387 aa12.4□□□□□ -0.43
CARMIL3-202ENST00000559694 CHST3Q7LGC8 479 aa12.4□□□□□ -0.43
CARMIL3-202ENST00000559694 CDK5RAP3Q96JB5 506 aa12.4□□□□□ -0.43
CARMIL3-202ENST00000559694 KRT23Q9C075 422 aa12.4□□□□□ -0.43
CARMIL3-202ENST00000559694 ADRA2BP18089 450 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 CCDC102BQ68D86 513 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 TTLL5Q6EMB2 1281 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 SASS6Q6UVJ0 657 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 AATFQ9NY61 560 aaKnown RBP eCLIP12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 SAP30BPQ9UHR5 308 aaKnown RBP12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 NOL7Q9UMY1 257 aaKnown RBP12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 IQSEC2Q5JU85 1478 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 NF2P35240 595 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 CBX1P83916 185 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 TBC1D9BQ66K14 1250 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 FAM227BQ96M60 508 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 ZHX1Q9UKY1 873 aaPredicted RBP12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 ZNF804BA4D1E1 1349 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 KLF18A0A0U1RQI7 1052 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 TPM3P06753 285 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 JMYQ8N9B5 988 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 TTLL11Q8NHH1 800 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 APPBP2Q92624 585 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 COL15A1P39059 1388 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 CCDC171Q6TFL3 1326 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
CARMIL3-202ENST00000559694 KRT85P78386 507 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 DEFB132Q7Z7B7 95 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 TTC6Q86TZ1 520 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 HOMER1Q86YM7 354 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 KIAA0825Q8IV33 1275 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 CCAR2Q8N163 923 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 C8orf76Q96K31 380 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 H7C1W4 665 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 ATP5JP18859 108 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 KIF5BP33176 963 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 TXLNAP40222 546 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 IARSP41252 1262 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 CNNM2Q9H8M5 875 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 TTF2Q9UNY4 1162 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 GPAA1O43292 621 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 PHKA1P46020 1223 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 TCP10Q12799 353 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 IFIT1BQ5T764 474 aaKnown RBP12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 TRIM5Q9C035 493 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 FBXO3Q9UK99 471 aa12.38□□□□□ -0.43
CARMIL3-202ENST00000559694 METAP2P50579 478 aaKnown RBP eCLIP12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 UBE4AQ14139 1066 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 KINO60870 393 aaKnown RBP12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 LETM1O95202 739 aaPredicted RBP12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 ADORA1P30542 326 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 TNNI2P48788 182 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 NECAB1Q8N987 351 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 CCDC66A2RUB6 948 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 DLGAP5Q15398 846 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 TEX35Q5T0J7 233 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 ZNF408Q9H9D4 720 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 HELLSQ9NRZ9 838 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 ORC3Q9UBD5 711 aaPredicted RBP12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
CARMIL3-202ENST00000559694 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 ITPK1Q13572 414 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 NFIXQ14938 502 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 EPHA10Q5JZY3 1008 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 PDCL2Q8N4E4 241 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 NLRP5P59047 1200 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 R3HDM1Q15032 1099 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 KLHL40Q2TBA0 621 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 GOLGA6L1Q8N7Z2 621 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 XDHP47989 1333 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 ZBTB43O43298 467 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 PRC1O43663 620 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 PRDM1O75626 825 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 PTPN12Q05209 780 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 TMTC2Q8N394 836 aa12.36□□□□□ -0.43
CARMIL3-202ENST00000559694 MAST3O60307 1309 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms