RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 METTL3Q86U44 580 aaKnown RBP6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 MYO1HQ8N1T3 1032 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 KIAA1958Q8N8K9 716 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 KMT5AQ9NQR1 393 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 ITSN1Q15811 1721 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 WASHC2CQ9Y4E1 1318 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 KIF20AO95235 890 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 TIFAQ96CG3 184 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 SUDS3Q9H7L9 328 aaPredicted RBP6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 LUZP4Q9P127 313 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 ATP8A1Q9Y2Q0 1164 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 NOS2P35228 1153 aa6.9□□□□□ -1.31
CTDSPL2-206ENST00000559175 NCOA4Q13772 614 aa6.9□□□□□ -1.31
CTDSPL2-206ENST00000559175 RSBN1LQ6PCB5 846 aaPredicted RBP6.9□□□□□ -1.31
CTDSPL2-206ENST00000559175 MAP7D2Q96T17 732 aa6.9□□□□□ -1.31
CTDSPL2-206ENST00000559175 TRIM55Q9BYV6 548 aa6.9□□□□□ -1.31
CTDSPL2-206ENST00000559175 CYLDQ9NQC7 956 aa6.9□□□□□ -1.31
CTDSPL2-206ENST00000559175 GRM1Q13255 1194 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 ESCO1Q5FWF5 840 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 JPH3Q8WXH2 748 aaPredicted RBP6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 ZBTB9Q96C00 473 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 CREBZFQ9NS37 354 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 CGNQ9P2M7 1197 aaKnown RBP6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 AKAP2Q9Y2D5 859 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 QSER1Q2KHR3 1735 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 A6NCN8 305 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 AGR2O95994 175 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 TMX1Q9H3N1 280 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 TECPR2O15040 1411 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 MTUS2Q5JR59 1369 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 FAM196BA6NMK8 535 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 NR1I2O75469 434 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 ATF4P18848 351 aaPredicted RBP6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 EXOSC10Q01780 885 aaKnown RBP6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 VPS72Q15906 364 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 LARP1BQ659C4 914 aaKnown RBP6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 MAATS1Q7Z4T9 603 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 VPS37DQ86XT2 251 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 FAM174AQ8TBP5 190 aa6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 SYMPKQ92797 1274 aaKnown RBP6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 C9orf78Q9NZ63 289 aaPredicted RBP6.89□□□□□ -1.31
CTDSPL2-206ENST00000559175 LILRB3O75022 631 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 HMMRO75330 724 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 WASHC5Q12768 1159 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 SERINC3Q13530 473 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 NAA30Q147X3 362 aaPredicted RBP6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 DEPDC7Q96QD5 511 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 CCDC94Q9BW85 323 aaPredicted RBP6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 CEP83Q9Y592 693 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 ZBBXA8MT70 800 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 KATNA1O75449 491 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 PDXDC1Q6P996 788 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 LARP1Q6PKG0 1096 aaKnown RBP6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 AGBL1Q96MI9 1066 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 DDX41Q9UJV9 622 aaKnown RBP6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 CDC42BPGQ6DT37 1551 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 SSBP05455 408 aaKnown RBP eCLIP6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 FAM83BQ5T0W9 1011 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 LILRB2Q8N423 598 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 TTC8Q8TAM2 541 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 RETREG1Q9H6L5 497 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 TYW1Q9NV66 732 aaKnown RBP6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 INSRP06213 1382 aa6.88□□□□□ -1.31
CTDSPL2-206ENST00000559175 MON2Q7Z3U7 1717 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 NUCB1Q02818 461 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 DMTNQ08495 405 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 ACBD5Q5T8D3 534 aaPredicted RBP6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 METTL5Q9NRN9 209 aaKnown RBP6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 CNTN3Q9P232 1028 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 CCDC163A0A0D9SF12 145 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 MTA2O94776 668 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 TMEM95Q3KNT9 176 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 ANKMY2Q8IV38 441 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 CPXCR1Q8N123 301 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 HNRNPLLQ8WVV9 542 aaKnown RBP6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 DNAJC7Q99615 494 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 RABL2BQ9UNT1 228 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 PPP2R3BQ9Y5P8 575 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 TPM2P07951 284 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 PAK2Q13177 524 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 NUTM2GQ5VZR2 741 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 NDUFAF2Q8N183 169 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 NPDC1Q9NQX5 325 aaPredicted RBP6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 SYNPO2Q9UMS6 1093 aa6.87□□□□□ -1.31
CTDSPL2-206ENST00000559175 ETFBP38117 255 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 MSL1Q68DK7 614 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 APPBP2Q92624 585 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 LEMD3Q9Y2U8 911 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 INMTO95050 263 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 COL6A1P12109 1028 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 NAT1P18440 290 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 ANKS3Q6ZW76 656 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 SKA1Q96BD8 255 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 RBM33Q96EV2 1170 aaKnown RBP6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 GGT7Q9UJ14 662 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 NWD2Q9ULI1 1742 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 ZNF831Q5JPB2 1677 aa6.86□□□□□ -1.31
CTDSPL2-206ENST00000559175 NRAPQ86VF7 1730 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms