RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 IGSF3O75054 1194 aa16.47■□□□□ 0.23
TPM1-215ENST00000558868 PDE6BP35913 854 aa16.47■□□□□ 0.23
TPM1-215ENST00000558868 EN1Q05925 392 aaPredicted RBP16.47■□□□□ 0.23
TPM1-215ENST00000558868 EZH2Q15910 746 aaKnown RBP16.47■□□□□ 0.23
TPM1-215ENST00000558868 CCDC129Q6ZRS4 1044 aa16.47■□□□□ 0.23
TPM1-215ENST00000558868 FBXO33Q7Z6M2 555 aa16.47■□□□□ 0.23
TPM1-215ENST00000558868 OSBP2Q969R2 916 aa16.47■□□□□ 0.23
TPM1-215ENST00000558868 JAKMIP1Q96N16 626 aaKnown RBP16.47■□□□□ 0.23
TPM1-215ENST00000558868 ZSWIM6Q9HCJ5 1215 aa16.47■□□□□ 0.23
TPM1-215ENST00000558868 ANKIB1Q9P2G1 1089 aa16.47■□□□□ 0.23
TPM1-215ENST00000558868 NRXN2Q9P2S2 1712 aa16.47■□□□□ 0.23
TPM1-215ENST00000558868 QSER1Q2KHR3 1735 aa16.46■□□□□ 0.23
TPM1-215ENST00000558868 M0R2C6 588 aa16.46■□□□□ 0.23
TPM1-215ENST00000558868 SLC34A2O95436 690 aa16.46■□□□□ 0.23
TPM1-215ENST00000558868 PDE6AP16499 860 aa16.46■□□□□ 0.23
TPM1-215ENST00000558868 CASTP20810 708 aaKnown RBP16.46■□□□□ 0.23
TPM1-215ENST00000558868 HIBADHP31937 336 aaKnown RBP16.46■□□□□ 0.23
TPM1-215ENST00000558868 GYG1P46976 350 aa16.46■□□□□ 0.23
TPM1-215ENST00000558868 TMED8Q6PL24 325 aaPredicted RBP16.46■□□□□ 0.23
TPM1-215ENST00000558868 FAM84BQ96KN1 310 aaPredicted RBP16.46■□□□□ 0.23
TPM1-215ENST00000558868 CWC22Q9HCG8 908 aaKnown RBP16.46■□□□□ 0.23
TPM1-215ENST00000558868 MMP10P09238 476 aa16.45■□□□□ 0.22
TPM1-215ENST00000558868 HSPD1P10809 573 aaKnown RBP16.45■□□□□ 0.22
TPM1-215ENST00000558868 ATP2B4P23634 1241 aa16.45■□□□□ 0.22
TPM1-215ENST00000558868 VPS53Q5VIR6 699 aa16.45■□□□□ 0.22
TPM1-215ENST00000558868 C15orf52Q6ZUT6 534 aaKnown RBP16.45■□□□□ 0.22
TPM1-215ENST00000558868 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
TPM1-215ENST00000558868 SPRYD3Q8NCJ5 442 aa16.45■□□□□ 0.22
TPM1-215ENST00000558868 UPF3BQ9BZI7 483 aaKnown RBP16.45■□□□□ 0.22
TPM1-215ENST00000558868 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
TPM1-215ENST00000558868 DCAF8L1A6NGE4 600 aa16.44■□□□□ 0.22
TPM1-215ENST00000558868 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
TPM1-215ENST00000558868 HMGB1P09429 215 aaKnown RBP16.44■□□□□ 0.22
TPM1-215ENST00000558868 NPR1P16066 1061 aa16.44■□□□□ 0.22
TPM1-215ENST00000558868 ALDH1B1P30837 517 aa16.44■□□□□ 0.22
TPM1-215ENST00000558868 ANKRD1Q15327 319 aa16.44■□□□□ 0.22
TPM1-215ENST00000558868 BLOC1S2Q6QNY1 142 aa16.44■□□□□ 0.22
TPM1-215ENST00000558868 ALDH8A1Q9H2A2 487 aaPredicted RBP16.44■□□□□ 0.22
TPM1-215ENST00000558868 PDRG1Q9NUG6 133 aa16.44■□□□□ 0.22
TPM1-215ENST00000558868 DOCK2Q92608 1830 aa16.44■□□□□ 0.22
TPM1-215ENST00000558868 ZNF532Q9HCE3 1301 aa16.44■□□□□ 0.22
TPM1-215ENST00000558868 RPAP1Q9BWH6 1393 aaPredicted RBP16.43■□□□□ 0.22
TPM1-215ENST00000558868 GPAA1O43292 621 aa16.43■□□□□ 0.22
TPM1-215ENST00000558868 CHGBP05060 677 aa16.43■□□□□ 0.22
TPM1-215ENST00000558868 ZNF804AQ7Z570 1209 aa16.43■□□□□ 0.22
TPM1-215ENST00000558868 ZSCAN31Q96LW9 406 aaPredicted RBP16.43■□□□□ 0.22
TPM1-215ENST00000558868 TTC14Q96N46 770 aa16.43■□□□□ 0.22
TPM1-215ENST00000558868 ANP32EQ9BTT0 268 aa16.43■□□□□ 0.22
TPM1-215ENST00000558868 TCRBV5S4A2TA0A5A2 114 aa16.42■□□□□ 0.22
TPM1-215ENST00000558868 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
TPM1-215ENST00000558868 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
TPM1-215ENST00000558868 AIDAQ96BJ3 306 aa16.42■□□□□ 0.22
TPM1-215ENST00000558868 INTS4Q96HW7 963 aaKnown RBP16.42■□□□□ 0.22
TPM1-215ENST00000558868 TMX3Q96JJ7 454 aa16.42■□□□□ 0.22
TPM1-215ENST00000558868 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
TPM1-215ENST00000558868 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
TPM1-215ENST00000558868 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
TPM1-215ENST00000558868 PODXL2Q9NZ53 605 aa16.42■□□□□ 0.22
TPM1-215ENST00000558868 GGA1Q9UJY5 639 aa16.42■□□□□ 0.22
TPM1-215ENST00000558868 WWC3Q9ULE0 1092 aa16.42■□□□□ 0.22
TPM1-215ENST00000558868 LIMCH1Q9UPQ0 1083 aa16.42■□□□□ 0.22
TPM1-215ENST00000558868 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
TPM1-215ENST00000558868 SRGNP10124 158 aa16.41■□□□□ 0.22
TPM1-215ENST00000558868 GNAT2P19087 354 aa16.41■□□□□ 0.22
TPM1-215ENST00000558868 DDIT3P35638 169 aa16.41■□□□□ 0.22
TPM1-215ENST00000558868 CUL4AQ13619 759 aa16.41■□□□□ 0.22
TPM1-215ENST00000558868 IMMTQ16891 758 aaKnown RBP16.41■□□□□ 0.22
TPM1-215ENST00000558868 ADCK5Q3MIX3 580 aa16.41■□□□□ 0.22
TPM1-215ENST00000558868 SLFNL1Q499Z3 407 aa16.41■□□□□ 0.22
TPM1-215ENST00000558868 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
TPM1-215ENST00000558868 ZGPATQ8N5A5 531 aaKnown RBP16.41■□□□□ 0.22
TPM1-215ENST00000558868 NEK1Q96PY6 1258 aa16.41■□□□□ 0.22
TPM1-215ENST00000558868 CAPN15O75808 1086 aa16.4■□□□□ 0.22
TPM1-215ENST00000558868 CYP21A2P08686 494 aa16.4■□□□□ 0.22
TPM1-215ENST00000558868 RPS6KB1P23443 525 aa16.4■□□□□ 0.22
TPM1-215ENST00000558868 AK2P54819 239 aa16.4■□□□□ 0.22
TPM1-215ENST00000558868 GPSM2P81274 684 aa16.4■□□□□ 0.22
TPM1-215ENST00000558868 MASTLQ96GX5 879 aa16.4■□□□□ 0.22
TPM1-215ENST00000558868 SH2B1Q9NRF2 756 aaPredicted RBP16.4■□□□□ 0.22
TPM1-215ENST00000558868 RAI14Q9P0K7 980 aa16.4■□□□□ 0.22
TPM1-215ENST00000558868 ABCF2Q9UG63 623 aa16.4■□□□□ 0.22
TPM1-215ENST00000558868 IRS2Q9Y4H2 1338 aa16.4■□□□□ 0.22
TPM1-215ENST00000558868 ANKRD31Q8N7Z5 1873 aa16.39■□□□□ 0.22
TPM1-215ENST00000558868 UFL1O94874 794 aa16.39■□□□□ 0.21
TPM1-215ENST00000558868 ALX1Q15699 326 aa16.39■□□□□ 0.21
TPM1-215ENST00000558868 MSL1Q68DK7 614 aa16.39■□□□□ 0.21
TPM1-215ENST00000558868 WDR66Q8TBY9 1149 aa16.39■□□□□ 0.21
TPM1-215ENST00000558868 NSFL1CQ9UNZ2 370 aaKnown RBP16.39■□□□□ 0.21
TPM1-215ENST00000558868 IQSEC3Q9UPP2 1182 aaPredicted RBP16.39■□□□□ 0.21
TPM1-215ENST00000558868 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
TPM1-215ENST00000558868 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
TPM1-215ENST00000558868 PATL2C9JE40 543 aaKnown RBP16.38■□□□□ 0.21
TPM1-215ENST00000558868 CYP7A1P22680 504 aa16.38■□□□□ 0.21
TPM1-215ENST00000558868 KLRK1P26718 216 aa16.38■□□□□ 0.21
TPM1-215ENST00000558868 NUCB2P80303 420 aa16.38■□□□□ 0.21
TPM1-215ENST00000558868 STYK1Q6J9G0 422 aa16.38■□□□□ 0.21
TPM1-215ENST00000558868 SLC16A10Q8TF71 515 aa16.38■□□□□ 0.21
TPM1-215ENST00000558868 STRBPQ96SI9 672 aaKnown RBP16.38■□□□□ 0.21
TPM1-215ENST00000558868 NACAP1Q9BZK3 213 aa16.38■□□□□ 0.21
TPM1-215ENST00000558868 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms