RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ZGPATQ8N5A5 531 aaKnown RBP18.02■□□□□ 0.48
VPS18-202ENST00000558474 FSD1Q9BTV5 496 aa18.02■□□□□ 0.48
VPS18-202ENST00000558474 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.02■□□□□ 0.48
VPS18-202ENST00000558474 LTBP3Q9NS15 1303 aa18.01■□□□□ 0.47
VPS18-202ENST00000558474 SALL1Q9NSC2 1324 aa18.01■□□□□ 0.47
VPS18-202ENST00000558474 FRAT2O75474 233 aaPredicted RBP18.01■□□□□ 0.47
VPS18-202ENST00000558474 CHMLP26374 656 aa18.01■□□□□ 0.47
VPS18-202ENST00000558474 KIAA2012Q0VF49 1180 aa18.01■□□□□ 0.47
VPS18-202ENST00000558474 PODNQ7Z5L7 613 aa18.01■□□□□ 0.47
VPS18-202ENST00000558474 WDR66Q8TBY9 1149 aa18.01■□□□□ 0.47
VPS18-202ENST00000558474 RUFY2Q8WXA3 655 aa18.01■□□□□ 0.47
VPS18-202ENST00000558474 NLGN2Q8NFZ4 835 aa18■□□□□ 0.47
VPS18-202ENST00000558474 SYT17Q9BSW7 474 aa18■□□□□ 0.47
VPS18-202ENST00000558474 SNRKQ9NRH2 765 aa18■□□□□ 0.47
VPS18-202ENST00000558474 ZNF219Q9P2Y4 722 aaPredicted RBP18■□□□□ 0.47
VPS18-202ENST00000558474 FAM205AQ6ZU69 1335 aa17.99■□□□□ 0.47
VPS18-202ENST00000558474 RAD50Q92878 1312 aa17.99■□□□□ 0.47
VPS18-202ENST00000558474 EPB41L2O43491 1005 aaKnown RBP17.99■□□□□ 0.47
VPS18-202ENST00000558474 SPTY2D1Q68D10 685 aaPredicted RBP17.99■□□□□ 0.47
VPS18-202ENST00000558474 TBC1D22AQ8WUA7 517 aa17.99■□□□□ 0.47
VPS18-202ENST00000558474 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
VPS18-202ENST00000558474 BCS1LQ9Y276 419 aa17.99■□□□□ 0.47
VPS18-202ENST00000558474 CCDC88AQ3V6T2 1871 aa17.99■□□□□ 0.47
VPS18-202ENST00000558474 G3V3G9 751 aa17.98■□□□□ 0.47
VPS18-202ENST00000558474 MAP3K12Q12852 859 aa17.98■□□□□ 0.47
VPS18-202ENST00000558474 DCAF8Q5TAQ9 597 aa17.98■□□□□ 0.47
VPS18-202ENST00000558474 PI16Q6UXB8 463 aa17.98■□□□□ 0.47
VPS18-202ENST00000558474 EDC3Q96F86 508 aaKnown RBP17.98■□□□□ 0.47
VPS18-202ENST00000558474 GPR101Q96P66 508 aaPredicted RBP17.98■□□□□ 0.47
VPS18-202ENST00000558474 ANTXR1Q9H6X2 564 aa17.98■□□□□ 0.47
VPS18-202ENST00000558474 NDUFB9Q9Y6M9 179 aa17.98■□□□□ 0.47
VPS18-202ENST00000558474 COL1A1P02452 1464 aaPredicted RBP17.98■□□□□ 0.47
VPS18-202ENST00000558474 MAST2Q6P0Q8 1798 aa17.98■□□□□ 0.47
VPS18-202ENST00000558474 RIMBP2O15034 1052 aa17.97■□□□□ 0.47
VPS18-202ENST00000558474 RNF113AO15541 343 aaKnown RBP17.97■□□□□ 0.47
VPS18-202ENST00000558474 UBE3CQ15386 1083 aa17.97■□□□□ 0.47
VPS18-202ENST00000558474 TAOK3Q9H2K8 898 aa17.97■□□□□ 0.47
VPS18-202ENST00000558474 HELLSQ9NRZ9 838 aa17.97■□□□□ 0.47
VPS18-202ENST00000558474 SUGT1Q9Y2Z0 365 aa17.97■□□□□ 0.47
VPS18-202ENST00000558474 PSME4Q14997 1843 aa17.97■□□□□ 0.47
VPS18-202ENST00000558474 MYO5AQ9Y4I1 1855 aaKnown RBP17.97■□□□□ 0.47
VPS18-202ENST00000558474 PPIP5K2O43314 1243 aa17.96■□□□□ 0.47
VPS18-202ENST00000558474 REC8O95072 547 aa17.96■□□□□ 0.47
VPS18-202ENST00000558474 FKBP1AP62942 108 aaKnown RBP17.96■□□□□ 0.47
VPS18-202ENST00000558474 ESYT1Q9BSJ8 1104 aa17.96■□□□□ 0.47
VPS18-202ENST00000558474 PIH1D3Q9NQM4 214 aaKnown RBP17.96■□□□□ 0.47
VPS18-202ENST00000558474 IQSEC3Q9UPP2 1182 aaPredicted RBP17.96■□□□□ 0.47
VPS18-202ENST00000558474 CHD4Q14839 1912 aa17.96■□□□□ 0.47
VPS18-202ENST00000558474 SGSM2O43147 1006 aa17.95■□□□□ 0.46
VPS18-202ENST00000558474 ADD2P35612 726 aa17.95■□□□□ 0.46
VPS18-202ENST00000558474 MFAP1P55081 439 aaKnown RBP17.95■□□□□ 0.46
VPS18-202ENST00000558474 ERICH6Q7L0X2 663 aa17.95■□□□□ 0.46
VPS18-202ENST00000558474 LRP2BPQ9P2M1 347 aa17.95■□□□□ 0.46
VPS18-202ENST00000558474 ECE2O60344 883 aa17.94■□□□□ 0.46
VPS18-202ENST00000558474 IDH1O75874 414 aaKnown RBP17.94■□□□□ 0.46
VPS18-202ENST00000558474 IARSP41252 1262 aaKnown RBP17.94■□□□□ 0.46
VPS18-202ENST00000558474 AOC3Q16853 763 aa17.94■□□□□ 0.46
VPS18-202ENST00000558474 ZMYM1Q5SVZ6 1142 aa17.94■□□□□ 0.46
VPS18-202ENST00000558474 APPBP2Q92624 585 aa17.94■□□□□ 0.46
VPS18-202ENST00000558474 UPF2Q9HAU5 1272 aaKnown RBP17.94■□□□□ 0.46
VPS18-202ENST00000558474 CHAF1AQ13111 956 aaPredicted RBP17.93■□□□□ 0.46
VPS18-202ENST00000558474 NMIQ13287 307 aaPredicted RBP17.93■□□□□ 0.46
VPS18-202ENST00000558474 MCMDC2Q4G0Z9 681 aa17.93■□□□□ 0.46
VPS18-202ENST00000558474 SLC9C2Q5TAH2 1124 aa17.93■□□□□ 0.46
VPS18-202ENST00000558474 STRIP1Q5VSL9 837 aa17.93■□□□□ 0.46
VPS18-202ENST00000558474 CWC27Q6UX04 472 aaKnown RBP17.93■□□□□ 0.46
VPS18-202ENST00000558474 LARGE2Q8N3Y3 721 aa17.93■□□□□ 0.46
VPS18-202ENST00000558474 ABCF2Q9UG63 623 aa17.93■□□□□ 0.46
VPS18-202ENST00000558474 ZNF646O15015 1829 aaPredicted RBP17.93■□□□□ 0.46
VPS18-202ENST00000558474 NFKBIEO00221 500 aa17.92■□□□□ 0.46
VPS18-202ENST00000558474 LDHBP07195 334 aaKnown RBP17.92■□□□□ 0.46
VPS18-202ENST00000558474 PDE6AP16499 860 aa17.92■□□□□ 0.46
VPS18-202ENST00000558474 DOK7Q18PE1 504 aa17.92■□□□□ 0.46
VPS18-202ENST00000558474 TTLL5Q6EMB2 1281 aa17.92■□□□□ 0.46
VPS18-202ENST00000558474 TCRBV5S4A2TA0A5A2 114 aa17.91■□□□□ 0.46
VPS18-202ENST00000558474 GTF2IP78347 998 aa17.91■□□□□ 0.46
VPS18-202ENST00000558474 GSTO1P78417 241 aa17.91■□□□□ 0.46
VPS18-202ENST00000558474 SLF2Q8IX21 1173 aa17.91■□□□□ 0.46
VPS18-202ENST00000558474 NIM1KQ8IY84 436 aa17.91■□□□□ 0.46
VPS18-202ENST00000558474 DBNDD1Q9H9R9 158 aa17.91■□□□□ 0.46
VPS18-202ENST00000558474 ZNF277Q9NRM2 450 aaPredicted RBP17.91■□□□□ 0.46
VPS18-202ENST00000558474 RAI14Q9P0K7 980 aa17.91■□□□□ 0.46
VPS18-202ENST00000558474 DICER1Q9UPY3 1922 aaKnown RBP17.91■□□□□ 0.46
VPS18-202ENST00000558474 A0A0D9SFI3 127 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 USP17L3A6NCW0 530 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 USP17L4A6NCW7 530 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 MFSD14BQ5SR56 506 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 KIAA1211Q6ZU35 1233 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 USP17L1Q7RTZ2 530 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 CERS3Q8IU89 383 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 MAGEB6Q8N7X4 407 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 JDP2Q8WYK2 163 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 NSUN4Q96CB9 384 aaKnown RBP17.9■□□□□ 0.46
VPS18-202ENST00000558474 FAM227BQ96M60 508 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 WWC3Q9ULE0 1092 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 ZNRF3Q9ULT6 936 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 MAST3O60307 1309 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 MYO3BQ8WXR4 1341 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 ZNF532Q9HCE3 1301 aa17.9■□□□□ 0.46
VPS18-202ENST00000558474 SCN9AQ15858 1988 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms