RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 SPECC1Q5M775 1068 aa17.88■□□□□ 0.45
AP4E1-202ENST00000558439 MYRIPQ8NFW9 859 aa17.88■□□□□ 0.45
AP4E1-202ENST00000558439 PPFIBP1Q86W92 1011 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 APPBP2Q92624 585 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 ZHX1Q9UKY1 873 aaPredicted RBP17.87■□□□□ 0.45
AP4E1-202ENST00000558439 SLC4A4Q9Y6R1 1079 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 UBASH3AP57075 661 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 SNW1Q13573 536 aaKnown RBP17.87■□□□□ 0.45
AP4E1-202ENST00000558439 NEMFO60524 1076 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 FGAP02671 866 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 DZIP3Q86Y13 1208 aaKnown RBP17.87■□□□□ 0.45
AP4E1-202ENST00000558439 IFT172Q9UG01 1749 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 GSDMDP57764 484 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 FILIP1LQ4L180 1135 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 DSCC1Q9BVC3 393 aa17.87■□□□□ 0.45
AP4E1-202ENST00000558439 G3V3G9 751 aa17.86■□□□□ 0.45
AP4E1-202ENST00000558439 DCAF8Q5TAQ9 597 aa17.86■□□□□ 0.45
AP4E1-202ENST00000558439 UBXN4Q92575 508 aa17.86■□□□□ 0.45
AP4E1-202ENST00000558439 KIF20BQ96Q89 1820 aa17.86■□□□□ 0.45
AP4E1-202ENST00000558439 TECPR2O15040 1411 aa17.86■□□□□ 0.45
AP4E1-202ENST00000558439 PFKFB2O60825 505 aa17.86■□□□□ 0.45
AP4E1-202ENST00000558439 ADD1P35611 737 aaKnown RBP17.86■□□□□ 0.45
AP4E1-202ENST00000558439 RPAP1Q9BWH6 1393 aaPredicted RBP17.86■□□□□ 0.45
AP4E1-202ENST00000558439 PDIA3P30101 505 aaKnown RBP17.86■□□□□ 0.45
AP4E1-202ENST00000558439 WTAPQ15007 396 aa17.86■□□□□ 0.45
AP4E1-202ENST00000558439 NAA16Q6N069 864 aaPredicted RBP17.86■□□□□ 0.45
AP4E1-202ENST00000558439 MBD4O95243 580 aa17.85■□□□□ 0.45
AP4E1-202ENST00000558439 CCDC196A0A1B0GTZ2 297 aa17.85■□□□□ 0.45
AP4E1-202ENST00000558439 UQCRFS1P1P0C7P4 283 aa17.85■□□□□ 0.45
AP4E1-202ENST00000558439 CYP7A1P22680 504 aa17.85■□□□□ 0.45
AP4E1-202ENST00000558439 TCIRG1Q13488 830 aa17.85■□□□□ 0.45
AP4E1-202ENST00000558439 TMEM87AQ8NBN3 555 aa17.85■□□□□ 0.45
AP4E1-202ENST00000558439 NSUN7Q8NE18 718 aaKnown RBP17.85■□□□□ 0.45
AP4E1-202ENST00000558439 GJB4Q9NTQ9 266 aa17.85■□□□□ 0.45
AP4E1-202ENST00000558439 ANKARQ7Z5J8 1434 aa17.85■□□□□ 0.45
AP4E1-202ENST00000558439 AFMP43652 599 aa17.84■□□□□ 0.45
AP4E1-202ENST00000558439 DACH1Q9UI36 760 aa17.84■□□□□ 0.45
AP4E1-202ENST00000558439 IPO7O95373 1038 aaKnown RBP17.84■□□□□ 0.45
AP4E1-202ENST00000558439 CCP110O43303 1012 aa17.84■□□□□ 0.45
AP4E1-202ENST00000558439 ANO1Q5XXA6 986 aa17.84■□□□□ 0.45
AP4E1-202ENST00000558439 OSBP2Q969R2 916 aa17.84■□□□□ 0.45
AP4E1-202ENST00000558439 BTG4Q9NY30 223 aa17.84■□□□□ 0.45
AP4E1-202ENST00000558439 MAST3O60307 1309 aa17.84■□□□□ 0.45
AP4E1-202ENST00000558439 ARMT1Q9H993 441 aa17.83■□□□□ 0.45
AP4E1-202ENST00000558439 PAXBP1Q9Y5B6 917 aa17.83■□□□□ 0.45
AP4E1-202ENST00000558439 RTN1Q16799 776 aa17.83■□□□□ 0.45
AP4E1-202ENST00000558439 ZNF202O95125 648 aa17.83■□□□□ 0.44
AP4E1-202ENST00000558439 TERF1P54274 439 aa17.83■□□□□ 0.44
AP4E1-202ENST00000558439 ASAP1Q9ULH1 1129 aa17.83■□□□□ 0.44
AP4E1-202ENST00000558439 ANGEL1Q9UNK9 670 aaKnown RBP17.83■□□□□ 0.44
AP4E1-202ENST00000558439 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
AP4E1-202ENST00000558439 CTDSPL2Q05D32 466 aa17.83■□□□□ 0.44
AP4E1-202ENST00000558439 CAVIN4Q5BKX8 364 aa17.83■□□□□ 0.44
AP4E1-202ENST00000558439 ZMYM1Q5SVZ6 1142 aa17.83■□□□□ 0.44
AP4E1-202ENST00000558439 ZBTB9Q96C00 473 aa17.83■□□□□ 0.44
AP4E1-202ENST00000558439 DNAI1Q9UI46 699 aa17.83■□□□□ 0.44
AP4E1-202ENST00000558439 PCDHA7Q9UN72 937 aa17.83■□□□□ 0.44
AP4E1-202ENST00000558439 AGLP35573 1532 aa17.82■□□□□ 0.44
AP4E1-202ENST00000558439 M0R2C6 588 aa17.82■□□□□ 0.44
AP4E1-202ENST00000558439 IQCA1Q86XH1 822 aa17.82■□□□□ 0.44
AP4E1-202ENST00000558439 KAZALD1Q96I82 304 aa17.82■□□□□ 0.44
AP4E1-202ENST00000558439 ZNF532Q9HCE3 1301 aa17.82■□□□□ 0.44
AP4E1-202ENST00000558439 BRAPQ7Z569 592 aa17.82■□□□□ 0.44
AP4E1-202ENST00000558439 SMARCE1Q969G3 411 aa17.82■□□□□ 0.44
AP4E1-202ENST00000558439 PGBD1Q96JS3 809 aa17.82■□□□□ 0.44
AP4E1-202ENST00000558439 ZSWIM4Q9H7M6 989 aa17.82■□□□□ 0.44
AP4E1-202ENST00000558439 NIP7Q9Y221 180 aaKnown RBP eCLIP17.82■□□□□ 0.44
AP4E1-202ENST00000558439 C11orf57Q6ZUT1 292 aaPredicted RBP17.81■□□□□ 0.44
AP4E1-202ENST00000558439 CMTR1Q8N1G2 835 aaKnown RBP17.81■□□□□ 0.44
AP4E1-202ENST00000558439 SYNE4Q8N205 404 aa17.81■□□□□ 0.44
AP4E1-202ENST00000558439 RNF41Q9H4P4 317 aaPredicted RBP17.81■□□□□ 0.44
AP4E1-202ENST00000558439 BCL2L12Q9HB09 334 aa17.81■□□□□ 0.44
AP4E1-202ENST00000558439 JAG2Q9Y219 1238 aa17.81■□□□□ 0.44
AP4E1-202ENST00000558439 CLIC4Q9Y696 253 aa17.81■□□□□ 0.44
AP4E1-202ENST00000558439 TMEM94Q12767 1356 aa17.81■□□□□ 0.44
AP4E1-202ENST00000558439 ATP6V1AP38606 617 aa17.81■□□□□ 0.44
AP4E1-202ENST00000558439 TXLNAP40222 546 aa17.81■□□□□ 0.44
AP4E1-202ENST00000558439 DHX8Q14562 1220 aaKnown RBP17.81■□□□□ 0.44
AP4E1-202ENST00000558439 MYSM1Q5VVJ2 828 aa17.81■□□□□ 0.44
AP4E1-202ENST00000558439 CEP131Q9UPN4 1083 aa17.81■□□□□ 0.44
AP4E1-202ENST00000558439 SPATA31D1Q6ZQQ2 1576 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 KRT40Q6A162 431 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 CCDC47Q96A33 483 aaKnown RBP17.8■□□□□ 0.44
AP4E1-202ENST00000558439 ELP1O95163 1332 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 RESTQ13127 1097 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 SYT10Q6XYQ8 523 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 ZNF274Q96GC6 653 aaPredicted RBP17.8■□□□□ 0.44
AP4E1-202ENST00000558439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.8■□□□□ 0.441e-6■■■■□ 22.6
AP4E1-202ENST00000558439 CEMIPQ8WUJ3 1361 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 hCG_1642624A0A1W2PR95 340 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 KIF2AO00139 706 aaPredicted RBP17.8■□□□□ 0.44
AP4E1-202ENST00000558439 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.44
AP4E1-202ENST00000558439 NDUFA8P51970 172 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 STX17P56962 302 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
AP4E1-202ENST00000558439 GREM2Q9H772 168 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 ERICH4A6NGS2 130 aa17.8■□□□□ 0.44
AP4E1-202ENST00000558439 PRDM1O75626 825 aa17.79■□□□□ 0.44
AP4E1-202ENST00000558439 TEX35Q5T0J7 233 aa17.79■□□□□ 0.44
AP4E1-202ENST00000558439 CATIPQ7Z7H3 387 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms