RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 Q6ZUG5 572 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 CEP112Q8N8E3 955 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 DRC1Q96MC2 740 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 GBP3Q9H0R5 595 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 HSD3B7Q9H2F3 369 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 L1RE1Q9UN81 338 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 HDAC5Q9UQL6 1122 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 PPFIA4O75335 1185 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 NDUFA8P51970 172 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 KCNG4Q8TDN1 519 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 ACBD3Q9H3P7 528 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 MED4Q9NPJ6 270 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 TAF6LQ9Y6J9 622 aa12.92□□□□□ -0.34
PCAT29-201ENST00000558411 MED1Q15648 1581 aaPredicted RBP12.92□□□□□ -0.34
PCAT29-201ENST00000558411 A0A087WUV0 522 aaPredicted RBP12.91□□□□□ -0.34
PCAT29-201ENST00000558411 TAF5LO75529 589 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 LMOD1P29536 600 aaPredicted RBP12.91□□□□□ -0.34
PCAT29-201ENST00000558411 HSP90AB2PQ58FF8 381 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 LRRC31Q6UY01 552 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 AACSQ86V21 672 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 ERCC4Q92889 916 aaPredicted RBP12.91□□□□□ -0.34
PCAT29-201ENST00000558411 FBXW7Q969H0 707 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 DHX58Q96C10 678 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
PCAT29-201ENST00000558411 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 RFX7Q2KHR2 1363 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 YEATS4O95619 227 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 SERPINC1P01008 464 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 HMGB1P09429 215 aaKnown RBP12.91□□□□□ -0.34
PCAT29-201ENST00000558411 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
PCAT29-201ENST00000558411 MYL5Q02045 173 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 TBX2Q13207 712 aaPredicted RBP12.91□□□□□ -0.34
PCAT29-201ENST00000558411 HSP90B2PQ58FF3 399 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 NECTIN2Q92692 538 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 BAG1Q99933 345 aaPredicted RBP12.91□□□□□ -0.34
PCAT29-201ENST00000558411 FSD1Q9BTV5 496 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 ANKZF1Q9H8Y5 726 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 AKAP2Q9Y2D5 859 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 FAN1Q9Y2M0 1017 aa12.91□□□□□ -0.34
PCAT29-201ENST00000558411 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
PCAT29-201ENST00000558411 SALL1Q9NSC2 1324 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 A0A1B0GVL5 298 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 PTPDC1A2A3K4 754 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 CUTAO60888 179 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 MCM6Q14566 821 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 HDGFL1Q5TGJ6 251 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 FOXR1Q6PIV2 292 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 ILDR1Q86SU0 546 aaPredicted RBP12.9□□□□□ -0.34
PCAT29-201ENST00000558411 TADA2BQ86TJ2 420 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 RPAINQ86UA6 219 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 DNAAF4Q8WXU2 420 aa12.9□□□□□ -0.34
PCAT29-201ENST00000558411 CFAP100Q494V2 611 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 DNAJC21Q5F1R6 531 aaKnown RBP12.89□□□□□ -0.35
PCAT29-201ENST00000558411 LINC00301Q8NCQ3 95 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
PCAT29-201ENST00000558411 TOMM22Q9NS69 142 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 TUBE1Q9UJT0 475 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 LAMA4Q16363 1823 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 GNAT3A8MTJ3 354 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 CTDNEP1O95476 244 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 CCDC172P0C7W6 258 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 ATP1A3P13637 1013 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 MLECQ14165 292 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 ZNF622Q969S3 477 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCAT29-201ENST00000558411 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
PCAT29-201ENST00000558411 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
PCAT29-201ENST00000558411 AGLP35573 1532 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 ZNF202O95125 648 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
PCAT29-201ENST00000558411 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 ZNF589Q86UQ0 364 aaPredicted RBP12.88□□□□□ -0.35
PCAT29-201ENST00000558411 FAM177A1Q8N128 213 aaPredicted RBP12.88□□□□□ -0.35
PCAT29-201ENST00000558411 CNNM3Q8NE01 707 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 CCDC12Q8WUD4 166 aaPredicted RBP12.88□□□□□ -0.35
PCAT29-201ENST00000558411 DPF2Q92785 391 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 VIPAS39Q9H9C1 493 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 CDC23Q9UJX2 597 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 CEP83Q9Y592 693 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 KIF1CO43896 1103 aaKnown RBP12.88□□□□□ -0.35
PCAT29-201ENST00000558411 HOXB7P09629 217 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 STK38Q15208 465 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 SF3A1Q15459 793 aaKnown RBP12.88□□□□□ -0.35
PCAT29-201ENST00000558411 AGXT2Q9BYV1 514 aa12.88□□□□□ -0.35
PCAT29-201ENST00000558411 TOPAZ1Q8N9V7 1692 aa12.87□□□□□ -0.35
PCAT29-201ENST00000558411 MRC1P22897 1456 aa12.87□□□□□ -0.35
PCAT29-201ENST00000558411 CMA1P23946 247 aa12.87□□□□□ -0.35
PCAT29-201ENST00000558411 USP8P40818 1118 aa12.87□□□□□ -0.35
PCAT29-201ENST00000558411 CASP8Q14790 479 aa12.87□□□□□ -0.35
PCAT29-201ENST00000558411 CXorf56Q9H5V9 222 aa12.87□□□□□ -0.35
PCAT29-201ENST00000558411 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
PCAT29-201ENST00000558411 BIN1O00499 593 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 SPTLC2O15270 562 aa12.86□□□□□ -0.35
PCAT29-201ENST00000558411 AARSP49588 968 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCAT29-201ENST00000558411 CTCFLQ8NI51 663 aaPredicted RBP12.86□□□□□ -0.35
PCAT29-201ENST00000558411 PNKPQ96T60 521 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms