RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 ZNF775Q96BV0 537 aaPredicted RBP9.75□□□□□ -0.85
SPG11-205ENST00000558080 PHAXQ9H814 394 aaKnown RBP9.75□□□□□ -0.85
SPG11-205ENST00000558080 CC2D2BQ6DHV5 1058 aa9.74□□□□□ -0.85
SPG11-205ENST00000558080 TSR2Q969E8 191 aaKnown RBP9.74□□□□□ -0.85
SPG11-205ENST00000558080 SALL2Q9Y467 1007 aaPredicted RBP9.74□□□□□ -0.85
SPG11-205ENST00000558080 SH3TC1Q8TE82 1336 aa9.74□□□□□ -0.85
SPG11-205ENST00000558080 ZNF541Q9H0D2 1346 aa9.74□□□□□ -0.85
SPG11-205ENST00000558080 COL4A5P29400 1685 aa9.74□□□□□ -0.85
SPG11-205ENST00000558080 SNED1Q8TER0 1413 aa9.73□□□□□ -0.85
SPG11-205ENST00000558080 RTL5Q5HYW3 569 aaPredicted RBP9.73□□□□□ -0.85
SPG11-205ENST00000558080 PLA2G2CQ5R387 149 aa9.73□□□□□ -0.85
SPG11-205ENST00000558080 RIC3Q7Z5B4 369 aa9.73□□□□□ -0.85
SPG11-205ENST00000558080 TSPYL6Q8N831 410 aa9.73□□□□□ -0.85
SPG11-205ENST00000558080 FAM89AQ96GI7 184 aa9.73□□□□□ -0.85
SPG11-205ENST00000558080 PSMD1Q99460 953 aa9.73□□□□□ -0.85
SPG11-205ENST00000558080 ISCA1Q9BUE6 129 aa9.73□□□□□ -0.85
SPG11-205ENST00000558080 TMX4Q9H1E5 349 aaPredicted RBP9.73□□□□□ -0.85
SPG11-205ENST00000558080 ABCC4O15439 1325 aa9.73□□□□□ -0.85
SPG11-205ENST00000558080 RNF123Q5XPI4 1314 aa9.73□□□□□ -0.85
SPG11-205ENST00000558080 CCDC30Q5VVM6 783 aa9.72□□□□□ -0.85
SPG11-205ENST00000558080 DDX46Q7L014 1031 aaKnown RBP9.72□□□□□ -0.85
SPG11-205ENST00000558080 WWC1Q8IX03 1113 aa9.72□□□□□ -0.85
SPG11-205ENST00000558080 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
SPG11-205ENST00000558080 DNAJC5GQ8N7S2 189 aa9.72□□□□□ -0.85
SPG11-205ENST00000558080 JDP2Q8WYK2 163 aa9.72□□□□□ -0.85
SPG11-205ENST00000558080 ATP6V0A2Q9Y487 856 aa9.72□□□□□ -0.85
SPG11-205ENST00000558080 LRRC37AA6NMS7 1700 aa9.72□□□□□ -0.85
SPG11-205ENST00000558080 TRPM7Q96QT4 1865 aa9.72□□□□□ -0.85
SPG11-205ENST00000558080 COL4A1P02462 1669 aa9.71□□□□□ -0.85
SPG11-205ENST00000558080 FZD9O00144 591 aa9.71□□□□□ -0.86
SPG11-205ENST00000558080 TNFRSF10AO00220 468 aa9.71□□□□□ -0.86
SPG11-205ENST00000558080 BBOX1O75936 387 aa9.71□□□□□ -0.86
SPG11-205ENST00000558080 CCDC27Q2M243 656 aa9.71□□□□□ -0.86
SPG11-205ENST00000558080 GRIPAP1Q4V328 841 aa9.71□□□□□ -0.86
SPG11-205ENST00000558080 JARID2Q92833 1246 aaPredicted RBP9.71□□□□□ -0.86
SPG11-205ENST00000558080 MYD88Q99836 296 aa9.71□□□□□ -0.86
SPG11-205ENST00000558080 GJA3Q9Y6H8 435 aa9.71□□□□□ -0.86
SPG11-205ENST00000558080 LTBP1Q14766 1721 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 IQCA1LA6NCM1 817 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 PPIP5K2O43314 1243 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 EIF6P56537 245 aaKnown RBP9.7□□□□□ -0.86
SPG11-205ENST00000558080 TRIM28Q13263 835 aaKnown RBP9.7□□□□□ -0.86
SPG11-205ENST00000558080 GRAPQ13588 217 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 AOC3Q16853 763 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
SPG11-205ENST00000558080 EAPPQ56P03 285 aaPredicted RBP9.7□□□□□ -0.86
SPG11-205ENST00000558080 SP8Q8IXZ3 490 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 FAM9BQ8IZU0 186 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 MPNDQ8N594 471 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 GRAPLQ8TC17 118 aaPredicted RBP9.7□□□□□ -0.86
SPG11-205ENST00000558080 SPSB2Q99619 263 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 TAF1DQ9H5J8 278 aaPredicted RBP9.7□□□□□ -0.86
SPG11-205ENST00000558080 HACL1Q9UJ83 578 aa9.7□□□□□ -0.86
SPG11-205ENST00000558080 FAM187AA6NFU0 413 aa9.69□□□□□ -0.86
SPG11-205ENST00000558080 IRS4O14654 1257 aaPredicted RBP9.69□□□□□ -0.86
SPG11-205ENST00000558080 TWISTNBQ3B726 338 aaPredicted RBP9.69□□□□□ -0.86
SPG11-205ENST00000558080 DPP8Q6V1X1 898 aaPredicted RBP9.69□□□□□ -0.86
SPG11-205ENST00000558080 NIM1KQ8IY84 436 aa9.69□□□□□ -0.86
SPG11-205ENST00000558080 GPC2Q8N158 579 aa9.69□□□□□ -0.86
SPG11-205ENST00000558080 ADAMTSL1Q8N6G6 1762 aa9.69□□□□□ -0.86
SPG11-205ENST00000558080 STK31Q9BXU1 1019 aa9.69□□□□□ -0.86
SPG11-205ENST00000558080 CHMP4AQ9BY43 222 aa9.69□□□□□ -0.86
SPG11-205ENST00000558080 SCN9AQ15858 1988 aa9.68□□□□□ -0.86
SPG11-205ENST00000558080 IL16Q14005 1332 aa9.68□□□□□ -0.86
SPG11-205ENST00000558080 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
SPG11-205ENST00000558080 DDX58O95786 925 aaKnown RBP9.68□□□□□ -0.86
SPG11-205ENST00000558080 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
SPG11-205ENST00000558080 EPHX2P34913 555 aa9.68□□□□□ -0.86
SPG11-205ENST00000558080 SF3B3Q15393 1217 aaKnown RBP9.68□□□□□ -0.86
SPG11-205ENST00000558080 G2E3Q7L622 706 aa9.68□□□□□ -0.86
SPG11-205ENST00000558080 ZBTB38Q8NAP3 1195 aaPredicted RBP9.68□□□□□ -0.86
SPG11-205ENST00000558080 SUPT20HQ8NEM7 779 aa9.68□□□□□ -0.86
SPG11-205ENST00000558080 CELF1Q92879 486 aaKnown RBP9.68□□□□□ -0.86
SPG11-205ENST00000558080 KLRG1Q96E93 195 aa9.68□□□□□ -0.86
SPG11-205ENST00000558080 METTL22Q9BUU2 404 aaPredicted RBP9.68□□□□□ -0.86
SPG11-205ENST00000558080 MAP3K2Q9Y2U5 619 aa9.68□□□□□ -0.86
SPG11-205ENST00000558080 DUOX1Q9NRD9 1551 aa9.67□□□□□ -0.86
SPG11-205ENST00000558080 PI4KAP2A4QPH2 592 aa9.67□□□□□ -0.86
SPG11-205ENST00000558080 CCER2I3L3R5 266 aa9.67□□□□□ -0.86
SPG11-205ENST00000558080 PCCAP05165 728 aaPredicted RBP9.67□□□□□ -0.86
SPG11-205ENST00000558080 RBM26Q5T8P6 1007 aaKnown RBP9.67□□□□□ -0.86
SPG11-205ENST00000558080 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
SPG11-205ENST00000558080 LDHDQ86WU2 507 aa9.67□□□□□ -0.86
SPG11-205ENST00000558080 PI4KAP1Q8N8J0 262 aa9.67□□□□□ -0.86
SPG11-205ENST00000558080 CCDC191Q8NCU4 936 aa9.67□□□□□ -0.86
SPG11-205ENST00000558080 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
SPG11-205ENST00000558080 RTFDC1Q9BY42 306 aaPredicted RBP9.67□□□□□ -0.86
SPG11-205ENST00000558080 SEC31BQ9NQW1 1179 aa9.67□□□□□ -0.86
SPG11-205ENST00000558080 CWC25Q9NXE8 425 aaPredicted RBP9.67□□□□□ -0.86
SPG11-205ENST00000558080 DAXXQ9UER7 740 aaPredicted RBP9.67□□□□□ -0.86
SPG11-205ENST00000558080 PSME4Q14997 1843 aa9.67□□□□□ -0.86
SPG11-205ENST00000558080 FANCIQ9NVI1 1328 aa9.66□□□□□ -0.86
SPG11-205ENST00000558080 GPR37O15354 613 aa9.66□□□□□ -0.86
SPG11-205ENST00000558080 LMOD1P29536 600 aaPredicted RBP9.66□□□□□ -0.86
SPG11-205ENST00000558080 EPS15P42566 896 aa9.66□□□□□ -0.86
SPG11-205ENST00000558080 RPS8P62241 208 aaKnown RBP9.66□□□□□ -0.86
SPG11-205ENST00000558080 GPSM2P81274 684 aa9.66□□□□□ -0.86
SPG11-205ENST00000558080 EXOSC9Q06265 439 aaKnown RBP9.66□□□□□ -0.86
SPG11-205ENST00000558080 MORN1Q5T089 497 aa9.66□□□□□ -0.86
SPG11-205ENST00000558080 TMC4Q7Z404 712 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms