RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 CYP2E1P05181 493 aaPredicted RBP20.41■□□□□ 0.86
SNX1-203ENST00000558040 DCAF8Q5TAQ9 597 aa20.41■□□□□ 0.86
SNX1-203ENST00000558040 TDRD7Q8NHU6 1098 aaKnown RBP20.41■□□□□ 0.86
SNX1-203ENST00000558040 RUFY2Q8WXA3 655 aa20.41■□□□□ 0.86
SNX1-203ENST00000558040 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.41■□□□□ 0.862e-6■■□□□ 13.8
SNX1-203ENST00000558040 CD209Q9NNX6 404 aa20.41■□□□□ 0.86
SNX1-203ENST00000558040 BCS1LQ9Y276 419 aa20.41■□□□□ 0.86
SNX1-203ENST00000558040 MYH13Q9UKX3 1938 aa20.41■□□□□ 0.86
SNX1-203ENST00000558040 IL1R1P14778 569 aa20.4■□□□□ 0.86
SNX1-203ENST00000558040 ZSCAN25Q6NSZ9 544 aa20.4■□□□□ 0.86
SNX1-203ENST00000558040 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
SNX1-203ENST00000558040 ANTXR1Q9H6X2 564 aa20.4■□□□□ 0.86
SNX1-203ENST00000558040 ZFYP08048 801 aaPredicted RBP20.39■□□□□ 0.85
SNX1-203ENST00000558040 ZGPATQ8N5A5 531 aaKnown RBP20.39■□□□□ 0.85
SNX1-203ENST00000558040 WWC3Q9ULE0 1092 aa20.39■□□□□ 0.85
SNX1-203ENST00000558040 COL1A1P02452 1464 aaPredicted RBP20.38■□□□□ 0.85
SNX1-203ENST00000558040 KIAA2012Q0VF49 1180 aa20.38■□□□□ 0.85
SNX1-203ENST00000558040 MAP3K12Q12852 859 aa20.38■□□□□ 0.85
SNX1-203ENST00000558040 CHAF1AQ13111 956 aaPredicted RBP20.38■□□□□ 0.85
SNX1-203ENST00000558040 WDR66Q8TBY9 1149 aa20.38■□□□□ 0.85
SNX1-203ENST00000558040 IGSF3O75054 1194 aa20.37■□□□□ 0.85
SNX1-203ENST00000558040 IDH1O75874 414 aaKnown RBP20.37■□□□□ 0.85
SNX1-203ENST00000558040 SYT17Q9BSW7 474 aa20.37■□□□□ 0.85
SNX1-203ENST00000558040 UPF2Q9HAU5 1272 aaKnown RBP20.37■□□□□ 0.85
SNX1-203ENST00000558040 PIH1D3Q9NQM4 214 aaKnown RBP20.37■□□□□ 0.85
SNX1-203ENST00000558040 ARFGEF1Q9Y6D6 1849 aa20.37■□□□□ 0.85
SNX1-203ENST00000558040 RAD50Q92878 1312 aa20.36■□□□□ 0.85
SNX1-203ENST00000558040 SALL1Q9NSC2 1324 aa20.36■□□□□ 0.85
SNX1-203ENST00000558040 RNF113AO15541 343 aaKnown RBP20.36■□□□□ 0.85
SNX1-203ENST00000558040 PPIP5K2O43314 1243 aa20.36■□□□□ 0.85
SNX1-203ENST00000558040 SPTY2D1Q68D10 685 aaPredicted RBP20.36■□□□□ 0.85
SNX1-203ENST00000558040 PODNQ7Z5L7 613 aa20.36■□□□□ 0.85
SNX1-203ENST00000558040 ESYT1Q9BSJ8 1104 aa20.36■□□□□ 0.85
SNX1-203ENST00000558040 TAOK3Q9H2K8 898 aa20.36■□□□□ 0.85
SNX1-203ENST00000558040 LRP2BPQ9P2M1 347 aa20.36■□□□□ 0.85
SNX1-203ENST00000558040 DOCK2Q92608 1830 aa20.35■□□□□ 0.85
SNX1-203ENST00000558040 REC8O95072 547 aa20.35■□□□□ 0.85
SNX1-203ENST00000558040 AOC3Q16853 763 aa20.35■□□□□ 0.85
SNX1-203ENST00000558040 DOK7Q18PE1 504 aa20.35■□□□□ 0.85
SNX1-203ENST00000558040 CWC27Q6UX04 472 aaKnown RBP20.35■□□□□ 0.85
SNX1-203ENST00000558040 TBC1D22AQ8WUA7 517 aa20.35■□□□□ 0.85
SNX1-203ENST00000558040 ABCF2Q9UG63 623 aa20.35■□□□□ 0.85
SNX1-203ENST00000558040 MFAP1P55081 439 aaKnown RBP20.34■□□□□ 0.85
SNX1-203ENST00000558040 NMIQ13287 307 aaPredicted RBP20.34■□□□□ 0.85
SNX1-203ENST00000558040 SLC9C2Q5TAH2 1124 aa20.34■□□□□ 0.85
SNX1-203ENST00000558040 TMED8Q6PL24 325 aaPredicted RBP20.34■□□□□ 0.85
SNX1-203ENST00000558040 FER1L6Q2WGJ9 1857 aa20.34■□□□□ 0.85
SNX1-203ENST00000558040 MYH7P12883 1935 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 FAM205AQ6ZU69 1335 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 LTBP3Q9NS15 1303 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 SGSM2O43147 1006 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 ECE2O60344 883 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 ADD2P35612 726 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 ERICH6Q7L0X2 663 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 LARGE2Q8N3Y3 721 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 DBNDD1Q9H9R9 158 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 HELLSQ9NRZ9 838 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 RAI14Q9P0K7 980 aa20.33■□□□□ 0.85
SNX1-203ENST00000558040 PDE6AP16499 860 aa20.32■□□□□ 0.84
SNX1-203ENST00000558040 IARSP41252 1262 aaKnown RBP20.32■□□□□ 0.84
SNX1-203ENST00000558040 UBE3CQ15386 1083 aa20.32■□□□□ 0.84
SNX1-203ENST00000558040 ZMYM1Q5SVZ6 1142 aa20.32■□□□□ 0.84
SNX1-203ENST00000558040 APPBP2Q92624 585 aa20.32■□□□□ 0.84
SNX1-203ENST00000558040 FAM227BQ96M60 508 aa20.32■□□□□ 0.84
SNX1-203ENST00000558040 ZNF277Q9NRM2 450 aaPredicted RBP20.32■□□□□ 0.84
SNX1-203ENST00000558040 A0A0D9SFI3 127 aa20.31■□□□□ 0.84
SNX1-203ENST00000558040 SEC24BO95487 1268 aa20.31■□□□□ 0.84
SNX1-203ENST00000558040 GTF2IP78347 998 aa20.31■□□□□ 0.84
SNX1-203ENST00000558040 MCMDC2Q4G0Z9 681 aa20.31■□□□□ 0.84
SNX1-203ENST00000558040 KIAA1211Q6ZU35 1233 aa20.31■□□□□ 0.84
SNX1-203ENST00000558040 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
SNX1-203ENST00000558040 JAG2Q9Y219 1238 aa20.31■□□□□ 0.84
SNX1-203ENST00000558040 NFKBIEO00221 500 aa20.3■□□□□ 0.84
SNX1-203ENST00000558040 LDHBP07195 334 aaKnown RBP20.3■□□□□ 0.84
SNX1-203ENST00000558040 MFSD14BQ5SR56 506 aa20.3■□□□□ 0.84
SNX1-203ENST00000558040 TTLL5Q6EMB2 1281 aa20.3■□□□□ 0.84
SNX1-203ENST00000558040 NIM1KQ8IY84 436 aa20.3■□□□□ 0.84
SNX1-203ENST00000558040 MAGEB6Q8N7X4 407 aa20.3■□□□□ 0.84
SNX1-203ENST00000558040 MAST2Q6P0Q8 1798 aa20.3■□□□□ 0.84
SNX1-203ENST00000558040 ZNF532Q9HCE3 1301 aa20.29■□□□□ 0.84
SNX1-203ENST00000558040 DZIP1Q86YF9 867 aaKnown RBP20.29■□□□□ 0.84
SNX1-203ENST00000558040 ANO2Q9NQ90 1003 aa20.29■□□□□ 0.84
SNX1-203ENST00000558040 SUGT1Q9Y2Z0 365 aa20.29■□□□□ 0.84
SNX1-203ENST00000558040 EPB41L2O43491 1005 aaKnown RBP20.28■□□□□ 0.84
SNX1-203ENST00000558040 FKBP1AP62942 108 aaKnown RBP20.28■□□□□ 0.84
SNX1-203ENST00000558040 GSTO1P78417 241 aa20.28■□□□□ 0.84
SNX1-203ENST00000558040 STRIP1Q5VSL9 837 aa20.28■□□□□ 0.84
SNX1-203ENST00000558040 NAA16Q6N069 864 aaPredicted RBP20.28■□□□□ 0.84
SNX1-203ENST00000558040 MYO5AQ9Y4I1 1855 aaKnown RBP20.28■□□□□ 0.84
SNX1-203ENST00000558040 TCRBV5S4A2TA0A5A2 114 aa20.27■□□□□ 0.84
SNX1-203ENST00000558040 USP17L3A6NCW0 530 aa20.27■□□□□ 0.84
SNX1-203ENST00000558040 USP17L4A6NCW7 530 aa20.27■□□□□ 0.84
SNX1-203ENST00000558040 CYP7A1P22680 504 aa20.27■□□□□ 0.84
SNX1-203ENST00000558040 PRDX5P30044 214 aa20.27■□□□□ 0.84
SNX1-203ENST00000558040 USP17L1Q7RTZ2 530 aa20.27■□□□□ 0.84
SNX1-203ENST00000558040 JDP2Q8WYK2 163 aa20.27■□□□□ 0.84
SNX1-203ENST00000558040 MAST3O60307 1309 aa20.27■□□□□ 0.83
SNX1-203ENST00000558040 CCDC171Q6TFL3 1326 aa20.27■□□□□ 0.83
SNX1-203ENST00000558040 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
SNX1-203ENST00000558040 CHD4Q14839 1912 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms