RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 SNRPA1P09661 255 aaKnown RBP10.62□□□□□ -0.71
RD3L-201ENST00000557640 FECHP22830 423 aa10.62□□□□□ -0.71
RD3L-201ENST00000557640 GRM1Q13255 1194 aa10.62□□□□□ -0.71
RD3L-201ENST00000557640 METTL3Q86U44 580 aaKnown RBP10.62□□□□□ -0.71
RD3L-201ENST00000557640 PNMA8AQ86V59 439 aaPredicted RBP10.62□□□□□ -0.71
RD3L-201ENST00000557640 RTKN2Q8IZC4 609 aa10.62□□□□□ -0.71
RD3L-201ENST00000557640 KIFC2Q96AC6 838 aa10.62□□□□□ -0.71
RD3L-201ENST00000557640 MIS18AQ9NYP9 233 aa10.62□□□□□ -0.71
RD3L-201ENST00000557640 ZNF652Q9Y2D9 606 aa10.62□□□□□ -0.71
RD3L-201ENST00000557640 ZNF646O15015 1829 aaPredicted RBP10.62□□□□□ -0.71
RD3L-201ENST00000557640 SHTN1A0MZ66 631 aa10.61□□□□□ -0.71
RD3L-201ENST00000557640 DDX11L8A8MPP1 907 aa10.61□□□□□ -0.71
RD3L-201ENST00000557640 NTSR2O95665 410 aa10.61□□□□□ -0.71
RD3L-201ENST00000557640 MRGPRX2Q96LB1 330 aa10.61□□□□□ -0.71
RD3L-201ENST00000557640 ZIC5Q96T25 663 aa10.61□□□□□ -0.71
RD3L-201ENST00000557640 TLL2Q9Y6L7 1015 aa10.61□□□□□ -0.71
RD3L-201ENST00000557640 PSME4Q14997 1843 aa10.61□□□□□ -0.71
RD3L-201ENST00000557640 TCERG1O14776 1098 aaKnown RBP10.6□□□□□ -0.71
RD3L-201ENST00000557640 GPTP24298 496 aa10.6□□□□□ -0.71
RD3L-201ENST00000557640 MAP2K1Q02750 393 aaPredicted RBP10.6□□□□□ -0.71
RD3L-201ENST00000557640 AOC3Q16853 763 aa10.6□□□□□ -0.71
RD3L-201ENST00000557640 BRICD5Q6PL45 260 aa10.6□□□□□ -0.71
RD3L-201ENST00000557640 DLK2Q6UY11 383 aa10.6□□□□□ -0.71
RD3L-201ENST00000557640 TPTE2Q6XPS3 522 aa10.6□□□□□ -0.71
RD3L-201ENST00000557640 DAXXQ9UER7 740 aaPredicted RBP10.6□□□□□ -0.71
RD3L-201ENST00000557640 MAP3K15Q6ZN16 1313 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 CCDC85CA6NKD9 419 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 HOXA10P31260 410 aaPredicted RBP10.59□□□□□ -0.71
RD3L-201ENST00000557640 RGS19P49795 217 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 TRIM32Q13049 653 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 SUSD4Q5VX71 490 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 LRP10Q7Z4F1 713 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 NGEFQ8N5V2 710 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 TRPM4Q8TD43 1214 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 HPS1Q92902 700 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 GPR101Q96P66 508 aaPredicted RBP10.59□□□□□ -0.71
RD3L-201ENST00000557640 GLIS2Q9BZE0 524 aaPredicted RBP10.59□□□□□ -0.71
RD3L-201ENST00000557640 MCOLN1Q9GZU1 580 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 ZBTB3Q9H5J0 574 aa10.59□□□□□ -0.71
RD3L-201ENST00000557640 SALL2Q9Y467 1007 aaPredicted RBP10.59□□□□□ -0.71
RD3L-201ENST00000557640 AKAP11Q9UKA4 1901 aa10.58□□□□□ -0.72
RD3L-201ENST00000557640 ALDH1B1P30837 517 aa10.58□□□□□ -0.72
RD3L-201ENST00000557640 HIRAP54198 1017 aaPredicted RBP10.58□□□□□ -0.72
RD3L-201ENST00000557640 NPM2Q86SE8 214 aaKnown RBP10.58□□□□□ -0.72
RD3L-201ENST00000557640 SAPCD2Q86UD0 394 aa10.58□□□□□ -0.72
RD3L-201ENST00000557640 LARGE2Q8N3Y3 721 aa10.58□□□□□ -0.72
RD3L-201ENST00000557640 JDP2Q8WYK2 163 aa10.58□□□□□ -0.72
RD3L-201ENST00000557640 THUMPD2Q9BTF0 503 aaKnown RBP10.58□□□□□ -0.72
RD3L-201ENST00000557640 GPRC5DQ9NZD1 345 aa10.58□□□□□ -0.72
RD3L-201ENST00000557640 HTTP42858 3142 aa10.58□□□□□ -0.72
RD3L-201ENST00000557640 ABCC4O15439 1325 aa10.58□□□□□ -0.72
RD3L-201ENST00000557640 LMOD1P29536 600 aaPredicted RBP10.57□□□□□ -0.72
RD3L-201ENST00000557640 GMPSP49915 693 aaPredicted RBP10.57□□□□□ -0.72
RD3L-201ENST00000557640 EIF6P56537 245 aaKnown RBP10.57□□□□□ -0.72
RD3L-201ENST00000557640 USP50Q70EL3 339 aaPredicted RBP10.57□□□□□ -0.72
RD3L-201ENST00000557640 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
RD3L-201ENST00000557640 YDJCA8MPS7 323 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 PPIP5K2O43314 1243 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 CELF2O95319 508 aaKnown RBP10.56□□□□□ -0.72
RD3L-201ENST00000557640 U2AF1L5P0DN76 240 aaPredicted RBP10.56□□□□□ -0.72
RD3L-201ENST00000557640 MYL6BP14649 208 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 PPP2R1AP30153 589 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 U2AF1Q01081 240 aaKnown RBP eCLIP10.56□□□□□ -0.72
RD3L-201ENST00000557640 MLLT1Q03111 559 aaPredicted RBP10.56□□□□□ -0.72
RD3L-201ENST00000557640 CXCL9Q07325 125 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 PROSER3Q2NL68 480 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 MSS51Q4VC12 460 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 ZNF34Q8IZ26 560 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 RPGRQ92834 1020 aaKnown RBP10.56□□□□□ -0.72
RD3L-201ENST00000557640 CRAMP1Q96RY5 1269 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 SPEF2Q9C093 1822 aa10.56□□□□□ -0.72
RD3L-201ENST00000557640 MKI67P46013 3256 aaKnown RBP10.55□□□□□ -0.72
RD3L-201ENST00000557640 ERVV-1B6SEH8 477 aa10.55□□□□□ -0.72
RD3L-201ENST00000557640 EGFRP00533 1210 aa10.55□□□□□ -0.72
RD3L-201ENST00000557640 GCGRP47871 477 aa10.55□□□□□ -0.72
RD3L-201ENST00000557640 EIF4A1P60842 406 aaKnown RBP10.55□□□□□ -0.72
RD3L-201ENST00000557640 CIAPIN1Q6FI81 312 aa10.55□□□□□ -0.72
RD3L-201ENST00000557640 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
RD3L-201ENST00000557640 NIM1KQ8IY84 436 aa10.55□□□□□ -0.72
RD3L-201ENST00000557640 ZSCAN1Q8NBB4 408 aa10.55□□□□□ -0.72
RD3L-201ENST00000557640 NYXQ9GZU5 481 aa10.55□□□□□ -0.72
RD3L-201ENST00000557640 ADARB2Q9NS39 739 aaKnown RBP10.55□□□□□ -0.72
RD3L-201ENST00000557640 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
RD3L-201ENST00000557640 ANXA1P04083 346 aa10.54□□□□□ -0.72
RD3L-201ENST00000557640 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
RD3L-201ENST00000557640 GMPRP36959 345 aa10.54□□□□□ -0.72
RD3L-201ENST00000557640 ECE1P42892 770 aa10.54□□□□□ -0.72
RD3L-201ENST00000557640 HIC1Q14526 733 aa10.54□□□□□ -0.72
RD3L-201ENST00000557640 TAF7Q15545 349 aaPredicted RBP10.54□□□□□ -0.72
RD3L-201ENST00000557640 CC2D2BQ6DHV5 1058 aa10.54□□□□□ -0.72
RD3L-201ENST00000557640 RTF1Q92541 710 aaKnown RBP10.54□□□□□ -0.72
RD3L-201ENST00000557640 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
RD3L-201ENST00000557640 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
RD3L-201ENST00000557640 RTFDC1Q9BY42 306 aaPredicted RBP10.54□□□□□ -0.72
RD3L-201ENST00000557640 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
RD3L-201ENST00000557640 BRCA2P51587 3418 aa10.53□□□□□ -0.72
RD3L-201ENST00000557640 LOC100996750A0A140TA64 210 aa10.53□□□□□ -0.72
RD3L-201ENST00000557640 FAM155AB1AL88 458 aaPredicted RBP10.53□□□□□ -0.72
RD3L-201ENST00000557640 RAD17O75943 681 aa10.53□□□□□ -0.72
RD3L-201ENST00000557640 BRPF1P55201 1214 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms