RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 CD209Q9NNX6 404 aa23.54■■□□□ 1.36
ABCD4-228ENST00000557588 MPHOSPH8Q99549 860 aa23.53■■□□□ 1.36
ABCD4-228ENST00000557588 KIAA0100Q14667 2235 aaKnown RBP23.53■■□□□ 1.36
ABCD4-228ENST00000557588 ARMC5Q96C12 935 aa23.52■■□□□ 1.36
ABCD4-228ENST00000557588 PTPN22Q9Y2R2 807 aa23.52■■□□□ 1.36
ABCD4-228ENST00000557588 KCNJ4P48050 445 aa23.51■■□□□ 1.35
ABCD4-228ENST00000557588 CASP7P55210 303 aa23.51■■□□□ 1.35
ABCD4-228ENST00000557588 CHRNDQ07001 517 aa23.51■■□□□ 1.35
ABCD4-228ENST00000557588 CRHR2Q13324 411 aa23.51■■□□□ 1.35
ABCD4-228ENST00000557588 C15orf52Q6ZUT6 534 aaKnown RBP23.51■■□□□ 1.35
ABCD4-228ENST00000557588 STK31Q9BXU1 1019 aa23.51■■□□□ 1.35
ABCD4-228ENST00000557588 SPDYE2BA6NHP3 402 aa23.5■■□□□ 1.35
ABCD4-228ENST00000557588 CSF1RP07333 972 aa23.5■■□□□ 1.35
ABCD4-228ENST00000557588 SPDYE6P0CI01 402 aa23.5■■□□□ 1.35
ABCD4-228ENST00000557588 DDX10Q13206 875 aaKnown RBP23.5■■□□□ 1.35
ABCD4-228ENST00000557588 GCKRQ14397 625 aa23.5■■□□□ 1.35
ABCD4-228ENST00000557588 SUPT20HL1Q3ZLR7 823 aa23.5■■□□□ 1.35
ABCD4-228ENST00000557588 PCDHAC2Q9Y5I4 1007 aa23.5■■□□□ 1.35
ABCD4-228ENST00000557588 MYO1BO43795 1136 aa23.49■■□□□ 1.35
ABCD4-228ENST00000557588 CD99L2Q8TCZ2 262 aa23.49■■□□□ 1.35
ABCD4-228ENST00000557588 TESPA1A2RU30 521 aaPredicted RBP23.48■■□□□ 1.35
ABCD4-228ENST00000557588 GJA5P36382 358 aa23.48■■□□□ 1.35
ABCD4-228ENST00000557588 IREB2P48200 963 aaKnown RBP23.48■■□□□ 1.35
ABCD4-228ENST00000557588 FKBP1AP62942 108 aaKnown RBP23.48■■□□□ 1.35
ABCD4-228ENST00000557588 CFAP100Q494V2 611 aa23.48■■□□□ 1.35
ABCD4-228ENST00000557588 OTUD7BQ6GQQ9 843 aa23.48■■□□□ 1.35
ABCD4-228ENST00000557588 ARAP2Q8WZ64 1704 aa23.47■■□□□ 1.35
ABCD4-228ENST00000557588 CLRN2A0PK11 232 aa23.47■■□□□ 1.35
ABCD4-228ENST00000557588 IL1R1P14778 569 aa23.47■■□□□ 1.35
ABCD4-228ENST00000557588 NBPF12Q5TAG4 269 aaPredicted RBP23.47■■□□□ 1.35
ABCD4-228ENST00000557588 G2E3Q7L622 706 aa23.47■■□□□ 1.35
ABCD4-228ENST00000557588 EFCC1Q9HA90 598 aa23.47■■□□□ 1.35
ABCD4-228ENST00000557588 AOX1Q06278 1338 aa23.46■■□□□ 1.35
ABCD4-228ENST00000557588 ANKRD13AQ8IZ07 590 aa23.46■■□□□ 1.35
ABCD4-228ENST00000557588 PRMT6Q96LA8 375 aaPredicted RBP23.46■■□□□ 1.35
ABCD4-228ENST00000557588 MYH16Q9H6N6 1097 aa23.46■■□□□ 1.35
ABCD4-228ENST00000557588 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.46■■□□□ 1.35
ABCD4-228ENST00000557588 SNAP23O00161 211 aa23.45■■□□□ 1.34
ABCD4-228ENST00000557588 USP2O75604 605 aaPredicted RBP23.45■■□□□ 1.34
ABCD4-228ENST00000557588 CAP1Q01518 475 aa23.45■■□□□ 1.34
ABCD4-228ENST00000557588 SP3Q02447 781 aa23.45■■□□□ 1.34
ABCD4-228ENST00000557588 ZNF804AQ7Z570 1209 aa23.45■■□□□ 1.34
ABCD4-228ENST00000557588 TSR2Q969E8 191 aaKnown RBP23.45■■□□□ 1.34
ABCD4-228ENST00000557588 PTPN18Q99952 460 aa23.45■■□□□ 1.34
ABCD4-228ENST00000557588 VEZTQ9HBM0 779 aa23.45■■□□□ 1.34
ABCD4-228ENST00000557588 ANKRD18BA2A2Z9 1011 aa23.44■■□□□ 1.34
ABCD4-228ENST00000557588 F8W031 263 aaPredicted RBP23.44■■□□□ 1.34
ABCD4-228ENST00000557588 EN2P19622 333 aaPredicted RBP23.44■■□□□ 1.34
ABCD4-228ENST00000557588 PRKRIP1Q9H875 184 aaPredicted RBP23.44■■□□□ 1.34
ABCD4-228ENST00000557588 TAF5LO75529 589 aa23.43■■□□□ 1.34
ABCD4-228ENST00000557588 FLIIQ13045 1269 aa23.43■■□□□ 1.34
ABCD4-228ENST00000557588 RASA3Q14644 834 aa23.43■■□□□ 1.34
ABCD4-228ENST00000557588 TWISTNBQ3B726 338 aaPredicted RBP23.43■■□□□ 1.34
ABCD4-228ENST00000557588 LINS1Q8NG48 757 aa23.43■■□□□ 1.34
ABCD4-228ENST00000557588 ZNF333Q96JL9 665 aa23.43■■□□□ 1.34
ABCD4-228ENST00000557588 CACNA1FO60840 1977 aa23.43■■□□□ 1.34
ABCD4-228ENST00000557588 SLC4A2P04920 1241 aa23.42■■□□□ 1.34
ABCD4-228ENST00000557588 FXR1P51114 621 aaKnown RBP eCLIP23.42■■□□□ 1.34
ABCD4-228ENST00000557588 TNFAIP1Q13829 316 aa23.41■■□□□ 1.34
ABCD4-228ENST00000557588 HELBQ8NG08 1087 aaPredicted RBP23.41■■□□□ 1.34
ABCD4-228ENST00000557588 DNAAF4Q8WXU2 420 aa23.41■■□□□ 1.34
ABCD4-228ENST00000557588 OPTNQ96CV9 577 aa23.41■■□□□ 1.34
ABCD4-228ENST00000557588 MS4A4AQ96JQ5 239 aa23.41■■□□□ 1.34
ABCD4-228ENST00000557588 SPDYE2Q495Y8 402 aa23.4■■□□□ 1.34
ABCD4-228ENST00000557588 FAM205AQ6ZU69 1335 aa23.39■■□□□ 1.34
ABCD4-228ENST00000557588 IFIT5Q13325 482 aaKnown RBP23.39■■□□□ 1.33
ABCD4-228ENST00000557588 TMEM106CQ9BVX2 250 aa23.39■■□□□ 1.33
ABCD4-228ENST00000557588 ELP3Q9H9T3 547 aa23.39■■□□□ 1.33
ABCD4-228ENST00000557588 RBM5P52756 815 aaKnown RBP eCLIP23.38■■□□□ 1.332e-6■□□□□ 10.6
ABCD4-228ENST00000557588 FOXO4P98177 505 aa23.38■■□□□ 1.33
ABCD4-228ENST00000557588 FKBP5Q13451 457 aaPredicted RBP23.38■■□□□ 1.33
ABCD4-228ENST00000557588 CCDC27Q2M243 656 aa23.38■■□□□ 1.33
ABCD4-228ENST00000557588 BRI3BPQ8WY22 251 aa23.38■■□□□ 1.33
ABCD4-228ENST00000557588 JAG2Q9Y219 1238 aa23.38■■□□□ 1.33
ABCD4-228ENST00000557588 ARHGEF6Q15052 776 aa23.37■■□□□ 1.33
ABCD4-228ENST00000557588 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.37■■□□□ 1.33
ABCD4-228ENST00000557588 TEPSINQ96N21 525 aa23.37■■□□□ 1.33
ABCD4-228ENST00000557588 ZNF70Q9UC06 446 aaPredicted RBP23.37■■□□□ 1.33
ABCD4-228ENST00000557588 SERPINA10Q9UK55 444 aa23.37■■□□□ 1.33
ABCD4-228ENST00000557588 SLC9C1Q4G0N8 1177 aa23.36■■□□□ 1.33
ABCD4-228ENST00000557588 PTCH2Q9Y6C5 1203 aa23.36■■□□□ 1.33
ABCD4-228ENST00000557588 CEP290O15078 2479 aa23.35■■□□□ 1.33
ABCD4-228ENST00000557588 VGLL4Q14135 290 aa23.35■■□□□ 1.33
ABCD4-228ENST00000557588 TAF1CQ15572 869 aaPredicted RBP23.35■■□□□ 1.33
ABCD4-228ENST00000557588 NBPF11Q86T75 865 aa23.35■■□□□ 1.33
ABCD4-228ENST00000557588 CDAN1Q8IWY9 1227 aa23.35■■□□□ 1.33
ABCD4-228ENST00000557588 ZFYVE28Q9HCC9 887 aa23.35■■□□□ 1.33
ABCD4-228ENST00000557588 IL16Q14005 1332 aa23.34■■□□□ 1.33
ABCD4-228ENST00000557588 ZSWIM8A7E2V4 1837 aa23.34■■□□□ 1.33
ABCD4-228ENST00000557588 CCL15-CCL14A0A0B4J2E2 113 aa23.34■■□□□ 1.33
ABCD4-228ENST00000557588 GTF2A2P52657 109 aa23.34■■□□□ 1.33
ABCD4-228ENST00000557588 CCL15Q16663 113 aa23.34■■□□□ 1.33
ABCD4-228ENST00000557588 MFSD14BQ5SR56 506 aa23.34■■□□□ 1.33
ABCD4-228ENST00000557588 WWC1Q8IX03 1113 aa23.34■■□□□ 1.33
ABCD4-228ENST00000557588 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.34■■□□□ 1.332e-6■■■□□ 15.6
ABCD4-228ENST00000557588 CNKSR2Q8WXI2 1034 aa23.34■■□□□ 1.33
ABCD4-228ENST00000557588 TTF2Q9UNY4 1162 aaKnown RBP23.34■■□□□ 1.33
ABCD4-228ENST00000557588 CHMP3Q9Y3E7 222 aa23.34■■□□□ 1.33
ABCD4-228ENST00000557588 FAM43AQ8N2R8 423 aa23.33■■□□□ 1.33
ABCD4-228ENST00000557588 TDRD7Q8NHU6 1098 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms