RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SLC51AQ86UW1 340 aa10.37□□□□□ -0.75
PSEN1-223ENST00000557511 FBXW7Q969H0 707 aa10.37□□□□□ -0.75
PSEN1-223ENST00000557511 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
PSEN1-223ENST00000557511 COA1Q9GZY4 146 aa10.37□□□□□ -0.75
PSEN1-223ENST00000557511 LRRFIP2Q9Y608 721 aaKnown RBP10.37□□□□□ -0.75
PSEN1-223ENST00000557511 MED23Q9ULK4 1368 aa10.37□□□□□ -0.75
PSEN1-223ENST00000557511 H7C1D1 291 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 TAF5LO75529 589 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 EPHX2P34913 555 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 VPS37DQ86XT2 251 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 TMEM57Q8N5G2 664 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 ANKRD44Q8N8A2 993 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 HELBQ8NG08 1087 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-223ENST00000557511 GPR101Q96P66 508 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-223ENST00000557511 MEIS3Q99687 375 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 MYH3P11055 1940 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 LRRC37AA6NMS7 1700 aa10.36□□□□□ -0.75
PSEN1-223ENST00000557511 DICER1Q9UPY3 1922 aaKnown RBP10.35□□□□□ -0.75
PSEN1-223ENST00000557511 USP17L3A6NCW0 530 aa10.35□□□□□ -0.75
PSEN1-223ENST00000557511 USP17L4A6NCW7 530 aa10.35□□□□□ -0.75
PSEN1-223ENST00000557511 RPS12P25398 132 aaKnown RBP10.35□□□□□ -0.75
PSEN1-223ENST00000557511 UBE4AQ14139 1066 aa10.35□□□□□ -0.75
PSEN1-223ENST00000557511 CAVIN4Q5BKX8 364 aa10.35□□□□□ -0.75
PSEN1-223ENST00000557511 PPP1R15BQ5SWA1 713 aa10.35□□□□□ -0.75
PSEN1-223ENST00000557511 USP17L1Q7RTZ2 530 aa10.35□□□□□ -0.75
PSEN1-223ENST00000557511 LDHDQ86WU2 507 aa10.35□□□□□ -0.75
PSEN1-223ENST00000557511 KAZALD1Q96I82 304 aa10.35□□□□□ -0.75
PSEN1-223ENST00000557511 TAF1DQ9H5J8 278 aaPredicted RBP10.35□□□□□ -0.75
PSEN1-223ENST00000557511 CCDC88AQ3V6T2 1871 aa10.35□□□□□ -0.75
PSEN1-223ENST00000557511 EYA2O00167 538 aa10.34□□□□□ -0.75
PSEN1-223ENST00000557511 PSMD14O00487 310 aa10.34□□□□□ -0.75
PSEN1-223ENST00000557511 SRGAP3O43295 1099 aa10.34□□□□□ -0.75
PSEN1-223ENST00000557511 FRAT2O75474 233 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-223ENST00000557511 IFIT1P09914 478 aaKnown RBP10.34□□□□□ -0.75
PSEN1-223ENST00000557511 GMPSP49915 693 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-223ENST00000557511 USP50Q70EL3 339 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-223ENST00000557511 DPF2Q92785 391 aa10.34□□□□□ -0.75
PSEN1-223ENST00000557511 ZSWIM6Q9HCJ5 1215 aa10.34□□□□□ -0.75
PSEN1-223ENST00000557511 ADARB2Q9NS39 739 aaKnown RBP10.34□□□□□ -0.75
PSEN1-223ENST00000557511 CEP126Q9P2H0 1117 aa10.34□□□□□ -0.75
PSEN1-223ENST00000557511 TAF1P21675 1872 aa10.34□□□□□ -0.75
PSEN1-223ENST00000557511 MYO3BQ8WXR4 1341 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 WDR90Q96KV7 1748 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 YDJCA8MPS7 323 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 IL15P40933 162 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-223ENST00000557511 G3BP1Q13283 466 aaKnown RBP eCLIP10.33□□□□□ -0.76
PSEN1-223ENST00000557511 OGFOD1Q8N543 542 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 AGBL3Q8NEM8 1001 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 PUS3Q9BZE2 481 aaKnown RBP10.33□□□□□ -0.76
PSEN1-223ENST00000557511 SIL1Q9H173 461 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 TSHZ2Q9NRE2 1034 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 WDR70Q9NW82 654 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 GPRC5DQ9NZD1 345 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 CNOT7Q9UIV1 285 aaKnown RBP10.33□□□□□ -0.76
PSEN1-223ENST00000557511 HDAC9Q9UKV0 1011 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 DDX19BQ9UMR2 479 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 TNNQ9UQP3 1299 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 RIPOR2Q9Y4F9 1068 aa10.33□□□□□ -0.76
PSEN1-223ENST00000557511 DUOX1Q9NRD9 1551 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 POTECB2RU33 542 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 CIAO1O76071 339 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 PDE8BO95263 885 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 VIL1P09327 827 aaKnown RBP10.32□□□□□ -0.76
PSEN1-223ENST00000557511 SLC5A1P13866 664 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 HIBADHP31937 336 aaKnown RBP10.32□□□□□ -0.76
PSEN1-223ENST00000557511 EPS15P42566 896 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 MMP14P50281 582 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 SCNN1DP51172 638 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
PSEN1-223ENST00000557511 OS9Q13438 667 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-223ENST00000557511 PUM3Q15397 648 aaKnown RBP10.32□□□□□ -0.76
PSEN1-223ENST00000557511 LRRC24Q50LG9 513 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 STRIP1Q5VSL9 837 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 TTLL5Q6EMB2 1281 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 RSBN1LQ6PCB5 846 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-223ENST00000557511 C15orf52Q6ZUT6 534 aaKnown RBP10.32□□□□□ -0.76
PSEN1-223ENST00000557511 KLHDC4Q8TBB5 520 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 PANK1Q8TE04 598 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 CD209Q9NNX6 404 aa10.32□□□□□ -0.76
PSEN1-223ENST00000557511 TBC1D12O60347 775 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 HSPA6P17066 643 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 APLP1P51693 650 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 EMP3P54852 163 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 GTF2IP78347 998 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 MTX1Q13505 466 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 MVPQ14764 893 aaKnown RBP10.31□□□□□ -0.76
PSEN1-223ENST00000557511 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
PSEN1-223ENST00000557511 LPIN2Q92539 896 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 COPRSQ9NQ92 184 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 GNL3LQ9NVN8 582 aaKnown RBP10.31□□□□□ -0.76
PSEN1-223ENST00000557511 AKAP2Q9Y2D5 859 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 COL4A1P02462 1669 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 COL4A5P29400 1685 aa10.31□□□□□ -0.76
PSEN1-223ENST00000557511 POTEMA6NI47 508 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 HMMRO75330 724 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 SLC34A2O95436 690 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 USP17L8P0C7I0 530 aa10.3□□□□□ -0.76
PSEN1-223ENST00000557511 RFX5P48382 616 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms