RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DPF2Q92785 391 aa7.68□□□□□ -1.18
VPS33B-207ENST00000557470 DBNDD1Q9H9R9 158 aa7.68□□□□□ -1.18
VPS33B-207ENST00000557470 KCNQ5Q9NR82 932 aa7.68□□□□□ -1.18
VPS33B-207ENST00000557470 RNF186Q9NXI6 227 aa7.68□□□□□ -1.18
VPS33B-207ENST00000557470 TRMT112Q9UI30 125 aaKnown RBP7.68□□□□□ -1.18
VPS33B-207ENST00000557470 ARIH1Q9Y4X5 557 aaPredicted RBP7.68□□□□□ -1.18
VPS33B-207ENST00000557470 SH3TC1Q8TE82 1336 aa7.68□□□□□ -1.18
VPS33B-207ENST00000557470 RTL9Q8NET4 1388 aa7.68□□□□□ -1.18
VPS33B-207ENST00000557470 TAF1P21675 1872 aa7.68□□□□□ -1.18
VPS33B-207ENST00000557470 COL4A1P02462 1669 aa7.67□□□□□ -1.18
VPS33B-207ENST00000557470 ZNF157P51786 506 aaPredicted RBP7.67□□□□□ -1.18
VPS33B-207ENST00000557470 TCIRG1Q13488 830 aa7.67□□□□□ -1.18
VPS33B-207ENST00000557470 TSR1Q2NL82 804 aaKnown RBP7.67□□□□□ -1.18
VPS33B-207ENST00000557470 HSP90AB3PQ58FF7 597 aa7.67□□□□□ -1.18
VPS33B-207ENST00000557470 RBM26Q5T8P6 1007 aaKnown RBP7.67□□□□□ -1.18
VPS33B-207ENST00000557470 TMC4Q7Z404 712 aa7.67□□□□□ -1.18
VPS33B-207ENST00000557470 MRPL50Q8N5N7 158 aaKnown RBP7.67□□□□□ -1.18
VPS33B-207ENST00000557470 C2orf69Q8N8R5 385 aa7.67□□□□□ -1.18
VPS33B-207ENST00000557470 CCDC102AQ96A19 550 aa7.67□□□□□ -1.18
VPS33B-207ENST00000557470 DCPSQ96C86 337 aaKnown RBP7.67□□□□□ -1.18
VPS33B-207ENST00000557470 POLLQ9UGP5 575 aa7.67□□□□□ -1.18
VPS33B-207ENST00000557470 MAPK8IP3Q9UPT6 1336 aa7.67□□□□□ -1.18
VPS33B-207ENST00000557470 GRXCR2A6NFK2 248 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 ECE2O60344 883 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 ZMYND10O75800 440 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 SLC10A3P09131 477 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 RPS12P25398 132 aaKnown RBP7.66□□□□□ -1.18
VPS33B-207ENST00000557470 PTPN5P54829 565 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 GPSM2P81274 684 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 KIF4BQ2VIQ3 1234 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 IL27Q8NEV9 243 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 CELF1Q92879 486 aaKnown RBP7.66□□□□□ -1.18
VPS33B-207ENST00000557470 CSRNP1Q96S65 589 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 GGA3Q9NZ52 723 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 RABGEF1Q9UJ41 708 aa7.66□□□□□ -1.18
VPS33B-207ENST00000557470 NSFL1CQ9UNZ2 370 aaKnown RBP7.66□□□□□ -1.18
VPS33B-207ENST00000557470 ASTN2O75129 1339 aaPredicted RBP7.66□□□□□ -1.18
VPS33B-207ENST00000557470 DDX60Q8IY21 1712 aaKnown RBP7.66□□□□□ -1.18
VPS33B-207ENST00000557470 C6orf229H3BNL8 230 aa7.65□□□□□ -1.18
VPS33B-207ENST00000557470 MAP3K7O43318 606 aa7.65□□□□□ -1.18
VPS33B-207ENST00000557470 KRT24Q2M2I5 525 aa7.65□□□□□ -1.18
VPS33B-207ENST00000557470 PRPF38BQ5VTL8 546 aaKnown RBP7.65□□□□□ -1.18
VPS33B-207ENST00000557470 CTU1Q7Z7A3 348 aaKnown RBP7.65□□□□□ -1.18
VPS33B-207ENST00000557470 SULF1Q8IWU6 871 aa7.65□□□□□ -1.18
VPS33B-207ENST00000557470 WNT2BQ93097 391 aa7.65□□□□□ -1.18
VPS33B-207ENST00000557470 CDCA5Q96FF9 252 aa7.65□□□□□ -1.18
VPS33B-207ENST00000557470 FAM89AQ96GI7 184 aa7.65□□□□□ -1.18
VPS33B-207ENST00000557470 NBPF3Q9H094 633 aa7.65□□□□□ -1.18
VPS33B-207ENST00000557470 KIAA1468Q9P260 1216 aa7.65□□□□□ -1.18
VPS33B-207ENST00000557470 POLR2AP24928 1970 aaKnown RBP7.64□□□□□ -1.19
VPS33B-207ENST00000557470 VIL1P09327 827 aaKnown RBP7.64□□□□□ -1.19
VPS33B-207ENST00000557470 RIPK4P57078 832 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 SF3B3Q15393 1217 aaKnown RBP7.64□□□□□ -1.19
VPS33B-207ENST00000557470 THSD4Q6ZMP0 1018 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 RASAL3Q86YV0 1011 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 KCTD17Q8N5Z5 321 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 TBC1D16Q8TBP0 767 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 EYA3Q99504 573 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 BABAM1Q9NWV8 329 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 CHPF2Q9P2E5 772 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 HPS5Q9UPZ3 1129 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 SCN9AQ15858 1988 aa7.64□□□□□ -1.19
VPS33B-207ENST00000557470 AKAP11Q9UKA4 1901 aa7.63□□□□□ -1.19
VPS33B-207ENST00000557470 GOLGA8CPA6NN73 597 aa7.63□□□□□ -1.19
VPS33B-207ENST00000557470 ATP5J2-PTCD1G3V325 749 aa7.63□□□□□ -1.19
VPS33B-207ENST00000557470 ZNF280AP59817 542 aaPredicted RBP7.63□□□□□ -1.19
VPS33B-207ENST00000557470 SCARF1Q14162 830 aa7.63□□□□□ -1.19
VPS33B-207ENST00000557470 RTL5Q5HYW3 569 aaPredicted RBP7.63□□□□□ -1.19
VPS33B-207ENST00000557470 ANGEL2Q5VTE6 544 aaKnown RBP7.63□□□□□ -1.19
VPS33B-207ENST00000557470 PLBD2Q8NHP8 589 aa7.63□□□□□ -1.19
VPS33B-207ENST00000557470 ISCA1Q9BUE6 129 aa7.63□□□□□ -1.19
VPS33B-207ENST00000557470 PNNQ9H307 717 aaKnown RBP7.63□□□□□ -1.19
VPS33B-207ENST00000557470 PLA2G2EQ9NZK7 142 aa7.63□□□□□ -1.19
VPS33B-207ENST00000557470 ZNF609O15014 1411 aa7.62□□□□□ -1.19
VPS33B-207ENST00000557470 PAPPA2Q9BXP8 1791 aa7.62□□□□□ -1.19
VPS33B-207ENST00000557470 IRS4O14654 1257 aaPredicted RBP7.62□□□□□ -1.19
VPS33B-207ENST00000557470 UFL1O94874 794 aa7.62□□□□□ -1.19
VPS33B-207ENST00000557470 TMPOP42166 694 aaKnown RBP7.62□□□□□ -1.19
VPS33B-207ENST00000557470 RPS8P62241 208 aaKnown RBP7.62□□□□□ -1.19
VPS33B-207ENST00000557470 HDGFL1Q5TGJ6 251 aa7.62□□□□□ -1.19
VPS33B-207ENST00000557470 MOB2Q70IA6 237 aa7.62□□□□□ -1.19
VPS33B-207ENST00000557470 ZC3H12CQ9C0D7 883 aaKnown RBP7.62□□□□□ -1.19
VPS33B-207ENST00000557470 SEC31BQ9NQW1 1179 aa7.62□□□□□ -1.19
VPS33B-207ENST00000557470 ANKIB1Q9P2G1 1089 aa7.62□□□□□ -1.19
VPS33B-207ENST00000557470 SEPT9Q9UHD8 586 aaPredicted RBP7.62□□□□□ -1.19
VPS33B-207ENST00000557470 SCAF8Q9UPN6 1271 aaKnown RBP7.62□□□□□ -1.19
VPS33B-207ENST00000557470 HTTP42858 3142 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 TRIM6-TRIM34B2RNG4 842 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 CHL1O00533 1208 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 TBC1D8O95759 1140 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 OSBPP22059 807 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 FKBP1BP68106 108 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 LMOD3Q0VAK6 560 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 RSBN1LQ6PCB5 846 aaPredicted RBP7.61□□□□□ -1.19
VPS33B-207ENST00000557470 AGBL3Q8NEM8 1001 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 ZNF296Q8WUU4 475 aaPredicted RBP7.61□□□□□ -1.19
VPS33B-207ENST00000557470 GMLQ99445 158 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 GGA1Q9UJY5 639 aa7.61□□□□□ -1.19
VPS33B-207ENST00000557470 PITPNM2Q9BZ72 1349 aa7.6□□□□□ -1.19
VPS33B-207ENST00000557470 TESPA1A2RU30 521 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms